Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G4546 Salvia bowleyana HOM05D007964 ORTHO05D010090 1.2e-70 269.6 127 100.0
Migut.O00757 Erythranthe guttata HOM05D007964 ORTHO05D010090 4.2e-39 164.9 134 61.9
Oeu046067.1 Olea europaea HOM05D007964 ORTHO05D010090 1.6e-38 162.9 124 66.1
Migut.N02947 Erythranthe guttata HOM05D007964 ORTHO05D010090 2.1e-38 162.5 134 61.9
SGA_v2.0_scaffold54G19690 Striga asiatica HOM05D007964 ORTHO05D010090 2.8e-35 152.1 125 56.8
PGSC0003DMG400025075 Solanum tuberosum HOM05D007964 ORTHO05D010090 1.1e-31 140.2 134 58.2
Aa31LG4G8900 Aethionema arabicum HOM05D007964 ORTHO05D010090 1.9e-31 139.4 141 52.5
Peaxi162Scf00360g00092 Petunia axillaris HOM05D007964 ORTHO05D010090 4.6e-30 134.8 127 57.5
Potri.005G198200 Populus trichocarpa HOM05D007964 ORTHO05D010090 4.6e-30 134.8 137 55.5
QL02p037092 Quercus lobata HOM05D007964 ORTHO05D010090 1.8e-29 132.9 132 53.8
Glyma.02G078400 Glycine max HOM05D007964 ORTHO05D010090 2.3e-29 132.5 127 54.3
Hma1.2p1_0678F.1_g202130 Hydrangea macrophylla HOM05D007964 ORTHO05D010090 5.1e-29 131.3 122 55.7
Phvul.004G087600 Phaseolus vulgaris HOM05D007964 ORTHO05D010090 8.7e-29 130.6 127 53.5
Psat0s1172g0240 Pisum sativum HOM05D007964 ORTHO05D010090 8.7e-29 130.6 127 52.0
Manes.02G184300 Manihot esculenta HOM05D007964 ORTHO05D010090 1.1e-28 130.2 141 49.6
QL02p036563 Quercus lobata HOM05D007964 ORTHO05D010090 1.1e-28 130.2 132 53.0
CSS0037867 Camellia sinensis var. sinensis HOM05D007964 ORTHO05D010090 1.5e-28 129.8 137 54.7
Ca_04662_v3 Cicer arietinum L. HOM05D007964 ORTHO05D010090 1.5e-28 129.8 127 53.5
Medtr6g039830 Medicago truncatula HOM05D007964 ORTHO05D010090 1.9e-28 129.4 127 52.0
CSS0006430 Camellia sinensis var. sinensis HOM05D007964 ORTHO05D010090 3.3e-28 128.6 137 55.5
Glyma.16G161400 Glycine max HOM05D007964 ORTHO05D010090 7.4e-28 127.5 113 54.9
Sabra05G0151100 Salix brachista HOM05D007964 ORTHO05D010090 1.4e-26 123.2 137 51.1
EL10Ac1g01623 Beta vulgaris HOM05D007964 ORTHO05D010090 2.4e-26 122.5 128 50.0
CsaV3_6G004920 Cucumis sativus L. HOM05D007964 ORTHO05D010090 4.0e-26 121.7 141 46.1
Atru.chr13.1988 Acer truncatum HOM05D007964 ORTHO05D010090 6.9e-26 120.9 145 51.0
MELO3C019968.2 Cucumis melo HOM05D007964 ORTHO05D010090 1.2e-25 120.2 141 46.1
PGR042G2516 Punica granatum HOM05D007964 ORTHO05D010090 1.2e-25 120.2 134 49.3
Rhsim06G0092800 Rhododendron simsii HOM05D007964 ORTHO05D010090 1.2e-25 120.2 120 53.3
Ciclev10003908m.g Citrus clementina HOM05D007964 ORTHO05D010090 1.5e-25 119.8 141 48.9
Lalb_Chr19g0130001 Lupinus albus HOM05D007964 ORTHO05D010090 1.5e-25 119.8 129 51.2
THA.LOC104810508 Tarenaya hassleriana HOM05D007964 ORTHO05D010090 3.4e-25 118.6 126 48.4
AUR62034908 Chenopodium quinoa HOM05D007964 ORTHO05D010090 1.0e-24 117.1 128 50.0
Thecc.08G162400 Theobroma cacao HOM05D007964 ORTHO05D010090 1.0e-24 117.1 126 48.4
AUR62026621 Chenopodium quinoa HOM05D007964 ORTHO05D010090 1.3e-24 116.7 128 50.0
ClCG08G007250 Citrullus lanatus HOM05D007964 ORTHO05D010090 1.7e-24 116.3 146 43.2
Cfa018267 Carpinus fangiana HOM05D007964 ORTHO05D010090 2.2e-24 115.9 139 46.8
DCAR_001195 Daucus carota HOM05D007964 ORTHO05D010090 2.2e-24 115.9 92 60.9
Aqoxy6G00437 Aquilegia oxysepala HOM05D007964 ORTHO05D010090 4.9e-24 114.8 125 48.8
Sed0027049 Sechium edule HOM05D007964 ORTHO05D010090 4.9e-24 114.8 147 43.5
CiPaw.15G011700 Carya illinoinensis HOM05D007964 ORTHO05D010090 1.1e-23 113.6 128 51.6
BolC6t39631H Brassica oleracea HOM05D007964 ORTHO05D010090 3.2e-23 112.1 127 49.6
Haze_17821 Corylus avellana HOM05D007964 ORTHO05D010090 3.2e-23 112.1 139 46.8
FAN27G1192 Fragaria x ananassa HOM05D007964 ORTHO05D010090 3.2e-23 112.1 128 48.4
FAN20G1166 Fragaria x ananassa HOM05D007964 ORTHO05D010090 4.2e-23 111.7 133 48.9
Nn5g28859 Nelumbo nucifera HOM05D007964 ORTHO05D010090 4.2e-23 111.7 109 56.0
Prupe.8G043200 Prunus persica HOM05D007964 ORTHO05D010090 4.2e-23 111.7 128 47.7
Ah.05g167820 Amaranthus hybridus HOM05D007964 ORTHO05D010090 9.3e-23 110.5 128 49.2
Nitab4.5_0003178g0050 Nicotiana tabacum HOM05D007964 ORTHO05D010090 1.2e-22 110.2 99 58.6
BraA07t31354Z Brassica rapa HOM05D007964 ORTHO05D010090 2.1e-22 109.4 127 48.0
Potri.002G062950 Populus trichocarpa HOM05D007964 ORTHO05D010090 2.1e-22 109.4 127 50.4
Sopen04g028110 Solanum pennellii HOM05D007964 ORTHO05D010090 2.1e-22 109.4 100 60.0
RcHm_v2.0_Chr6g0273981 Rosa chinensis HOM05D007964 ORTHO05D010090 3.5e-22 108.6 128 48.4
Sp5g26770 Schrenkiella parvula HOM05D007964 ORTHO05D010090 3.5e-22 108.6 143 46.9
BcaC08g46600 Brassica carinata HOM05D007964 ORTHO05D010090 4.6e-22 108.2 132 47.0
A07p37890 Brassica napus HOM05D007964 ORTHO05D010090 4.6e-22 108.2 123 49.6
C06p45790 Brassica napus HOM05D007964 ORTHO05D010090 4.6e-22 108.2 132 47.0
Nitab4.5_0003443g0080 Nicotiana tabacum HOM05D007964 ORTHO05D010090 4.6e-22 108.2 100 58.0
Lsat_1_v5_gn_6_100061 Lactuca sativa HOM05D007964 ORTHO05D010090 6.0e-22 107.8 126 49.2
FvH4_2g12880 Fragaria vesca HOM05D007964 ORTHO05D010090 1.0e-21 107.1 128 47.7
FAN24G2710 Fragaria x ananassa HOM05D007964 ORTHO05D010090 1.0e-21 107.1 128 47.7
Gohir.A06G112000 Gossypium hirsutum HOM05D007964 ORTHO05D010090 1.0e-21 107.1 126 46.0
AT1G71740 Arabidopsis thaliana HOM05D007964 ORTHO05D010090 2.3e-21 105.9 130 48.5
Gorai.010G134000 Gossypium raimondii HOM05D007964 ORTHO05D010090 2.3e-21 105.9 126 46.8
CAN.G1183.20 Capsicum annuum HOM05D007964 ORTHO05D010090 3.0e-21 105.5 96 57.3
CARHR291050 Cardamine hirsuta HOM05D007964 ORTHO05D010090 3.0e-21 105.5 114 49.1
Thhalv10019796m.g Eutrema salsugineum HOM05D007964 ORTHO05D010090 5.1e-21 104.8 124 49.2
Sed0009872 Sechium edule HOM05D007964 ORTHO05D010090 6.7e-21 104.4 147 38.8
Gohir.D06G116200 Gossypium hirsutum HOM05D007964 ORTHO05D010090 8.7e-21 104.0 126 46.0
Carub.0002s1850 Capsella rubella HOM05D007964 ORTHO05D010090 1.5e-20 103.2 130 46.2
AL2G31310 Arabidopsis lyrata HOM05D007964 ORTHO05D010090 1.9e-20 102.8 135 45.9
CANSAT25G1394 Cannabis sativa HOM05D007964 ORTHO05D010090 7.4e-20 100.9 120 45.0
COL.COLO4_29112 Corchorus olitorius HOM05D007964 ORTHO05D010090 1.4e-18 96.7 126 44.4
ATR1120G014 Amborella trichopoda HOM05D007964 ORTHO05D010090 7.4e-12 74.3 125 36.8
Os02g0210900 Oryza sativa ssp. japonica HOM05D007964 ORTHO05D010090 7.4e-12 74.3 114 41.2
CSS0037942 Camellia sinensis var. sinensis HOM05D007964 ORTHO05D010090 1.1e-10 70.5 45 71.1
HPP92_000633 Vanilla planifolia HOM05D007964 ORTHO05D010090 1.2e-09 67.0 95 37.9
Zm00001eb205370 Zea mays HOM05D007964 ORTHO05D010090 8.5e-08 60.8 71 47.9
Cc04_g07570 Coffea canephora HOM05D002803 ORTHO05D003089 1.1e-07 60.5 51 51.0
PGR102G2995 Punica granatum HOM05D002803 ORTHO05D003089 3.2e-07 58.9 47 57.4
Lalb_Chr07g0178561 Lupinus albus HOM05D002803 ORTHO05D003089 7.2e-07 57.8 39 64.1
MBI10_g08546_MAGBIO Magnolia biondii HOM05D008294 ORTHO05D010468 1.6e-06 56.6 116 33.6
Ah.02g127220 Amaranthus hybridus HOM05D002803 ORTHO05D003089 2.1e-06 56.2 103 32.0
TAR629G1495 Trochodendron aralioides HOM05D002803 ORTHO05D003089 2.7e-06 55.8 34 67.6
Nn3g17698 Nelumbo nucifera HOM05D002803 ORTHO05D003089 3.6e-06 55.5 37 62.2
TAR374G0994 Trochodendron aralioides HOM05D002803 ORTHO05D003089 3.6e-06 55.5 34 67.6
PSO724G0959 Papaver somniferum HOM05D002803 ORTHO05D003089 4.7e-06 55.1 128 32.8
Ah.03g137920 Amaranthus hybridus HOM05D002803 ORTHO05D003089 6.1e-06 54.7 60 43.3
PSO423G0278 Papaver somniferum HOM05D002803 ORTHO05D003089 6.1e-06 54.7 46 56.5


User provided reference genes

Program Settings