Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G4489 Salvia bowleyana HOM05D000358 ORTHO05D009346 2.3e-93 345.5 173 100.0
MSTRG.12558 Avicennia marina HOM05D000358 ORTHO05D009346 2.9e-59 232.3 171 66.7
SGA_v2.0_scaffold81G26022 Striga asiatica HOM05D000358 ORTHO05D009346 8.4e-59 230.7 171 67.8
Migut.N02045 Erythranthe guttata HOM05D000358 ORTHO05D009346 2.4e-53 212.6 169 66.9
Dinv32921 Davidia involucrata HOM05D000358 ORTHO05D002525 8.2e-46 187.6 160 61.2
CSS0040373 Camellia sinensis var. sinensis HOM05D000358 ORTHO05D009346 1.5e-44 183.3 142 62.7
Glyma.03G155200 Glycine max HOM05D000358 ORTHO05D009346 6.5e-43 177.9 132 64.4
Manes.05G077400 Manihot esculenta HOM05D000358 ORTHO05D009346 6.5e-43 177.9 155 61.3
EL10Ac5g10557 Beta vulgaris HOM05D000358 ORTHO05D009346 8.5e-43 177.6 166 55.4
Prupe.8G239600 Prunus persica HOM05D000358 ORTHO05D009346 1.1e-42 177.2 142 61.3
TWI14G1410 Tripterygium wilfordii HOM05D000358 ORTHO05D009346 1.1e-42 177.2 129 66.7
TAR375G0394 Trochodendron aralioides HOM05D000358 ORTHO05D009346 1.4e-42 176.8 169 56.2
CANSAT25G1780 Cannabis sativa HOM05D000358 ORTHO05D009346 1.9e-42 176.4 169 56.8
Lsat_1_v5_gn_9_3480 Lactuca sativa HOM05D000358 ORTHO05D009346 1.9e-42 176.4 103 76.7
MD11G1284000 Malus domestica HOM05D000358 ORTHO05D009346 7.2e-42 174.5 163 57.1
GSVIVG01001163001 Vitis vinifera HOM05D000358 ORTHO05D009346 9.4e-42 174.1 159 57.2
CiPaw.07G090600 Carya illinoinensis HOM05D000358 ORTHO05D009346 1.2e-41 173.7 162 55.6
Cpa.g.sc52.51 Carica papaya HOM05D000358 ORTHO05D009346 1.6e-41 173.3 140 62.1
Nitab4.5_0005971g0010 Nicotiana tabacum HOM05D000358 ORTHO05D009346 2.1e-41 172.9 173 53.2
Peaxi162Scf00641g00315 Petunia axillaris HOM05D000358 ORTHO05D009346 2.1e-41 172.9 143 60.1
Thecc.01G276900 Theobroma cacao HOM05D000358 ORTHO05D009346 2.1e-41 172.9 115 69.6
TAR636G2394 Trochodendron aralioides HOM05D000358 ORTHO05D009346 2.1e-41 172.9 169 55.0
Sabra05G0160900 Salix brachista HOM05D000358 ORTHO05D009346 2.7e-41 172.6 165 55.8
Phvul.001G152500 Phaseolus vulgaris HOM05D000358 ORTHO05D009346 3.6e-41 172.2 115 68.7
AUR62028609 Chenopodium quinoa HOM05D000358 ORTHO05D009346 4.6e-41 171.8 165 57.6
HanXRQChr15g0466741 Helianthus annuus HOM05D000358 ORTHO05D009346 6.1e-41 171.4 164 55.5
MBI04_g20822_MAGBIO Magnolia biondii HOM05D000358 ORTHO05D009346 6.1e-41 171.4 176 54.0
Duzib133G0337 Durio zibethinus HOM05D000358 ORTHO05D009346 7.9e-41 171.0 131 65.6
Nitab4.5_0004318g0030 Nicotiana tabacum HOM05D000358 ORTHO05D009346 7.9e-41 171.0 177 54.2
PGR044G2401 Punica granatum HOM05D000358 ORTHO05D009346 7.9e-41 171.0 110 70.9
Atru.chr5.1460 Acer truncatum HOM05D000358 ORTHO05D009346 1.0e-40 170.6 130 60.0
Eucgr.K03368 Eucalyptus grandis HOM05D000358 ORTHO05D009346 1.0e-40 170.6 113 70.8
Ciclev10022514m.g Citrus clementina HOM05D000358 ORTHO05D009346 5.1e-40 168.3 142 57.7
CsaV3_6G037210 Cucumis sativus L. HOM05D000358 ORTHO05D009346 5.1e-40 168.3 138 59.4
Gorai.007G137700 Gossypium raimondii HOM05D000358 ORTHO05D009346 5.1e-40 168.3 130 65.4
Rhsim13G0026100 Rhododendron simsii HOM05D000358 ORTHO05D009346 6.7e-40 167.9 101 74.3
RcHm_v2.0_Chr6g0290831 Rosa chinensis HOM05D000358 ORTHO05D009346 6.7e-40 167.9 110 70.0
Sopen09g027050 Solanum pennellii HOM05D000358 ORTHO05D009346 8.8e-40 167.5 169 56.2
Zm00001eb054110 Zea mays HOM05D000358 ORTHO05D009346 8.8e-40 167.5 104 70.2
Gohir.A11G123500 Gossypium hirsutum HOM05D000358 ORTHO05D009346 2.0e-39 166.4 130 64.6
FvH4_2g23371 Fragaria vesca HOM05D000358 ORTHO05D009346 2.5e-39 166.0 163 54.0
Cc01_g19380 Coffea canephora HOM05D000358 ORTHO05D009346 3.3e-39 165.6 154 58.4
Gohir.D11G128700 Gossypium hirsutum HOM05D000358 ORTHO05D009346 5.7e-39 164.9 152 59.9
Lj1A47T39 Lonicera japonica HOM05D000358 ORTHO05D009346 7.4e-39 164.5 164 56.7
Actinidia09124 Actinidia chinensis HOM05D000358 ORTHO05D009346 1.3e-38 163.7 104 69.2
PSO210G0760 Papaver somniferum HOM05D000358 ORTHO05D009346 2.2e-38 162.9 104 67.3
PSO761G0166 Papaver somniferum HOM05D000358 ORTHO05D009346 2.2e-38 162.9 154 54.5
Sed0015724 Sechium edule HOM05D000358 ORTHO05D009346 2.8e-38 162.5 152 55.3
arahy.Tifrunner.gnm1.ann1.1D6AAZ Arachis hypogaea HOM05D000358 ORTHO05D009346 6.3e-38 161.4 113 67.3
arahy.Tifrunner.gnm1.ann1.M7C8NM Arachis hypogaea HOM05D000358 ORTHO05D009346 6.3e-38 161.4 113 67.3
ECA247G2961 Erigeron canadensis HOM05D000358 ORTHO05D009346 1.4e-37 160.2 103 68.9
Hund09500 Selenicereus undatus HOM05D000358 ORTHO05D009346 1.8e-37 159.8 164 51.8
Potri.005G210700 Populus trichocarpa HOM05D000358 ORTHO05D009346 3.1e-37 159.1 163 52.8
Aqoxy2G03373 Aquilegia oxysepala HOM05D000358 ORTHO05D009346 4.1e-37 158.7 106 65.1
Medtr7g095090 Medicago truncatula HOM05D000358 ORTHO05D009346 4.1e-37 158.7 149 58.4
Carub.0006s3438 Capsella rubella HOM05D000358 ORTHO05D009346 6.9e-37 157.9 156 54.5
Lj1g0011093 Lotus japonicus HOM05D000358 ORTHO05D009346 2.0e-36 156.4 162 51.9
Os03g0701300 Oryza sativa ssp. japonica HOM05D000358 ORTHO05D009346 2.0e-36 156.4 96 72.9
TPR.G35683 Trifolium pratense HOM05D000358 ORTHO05D009346 2.0e-36 156.4 171 56.1
Sp6g02670 Schrenkiella parvula HOM05D000358 ORTHO05D009346 3.4e-36 155.6 105 65.7
Solyc09g065300.4 Solanum lycopersicum HOM05D000358 ORTHO05D009346 1.0e-35 154.1 162 54.9
Thhalv10029025m.g Eutrema salsugineum HOM05D000358 ORTHO05D009346 1.7e-35 153.3 105 64.8
AT4G02725 Arabidopsis thaliana HOM05D000358 ORTHO05D009346 2.2e-35 152.9 128 57.8
A09p02150 Brassica napus HOM05D000358 ORTHO05D009346 2.2e-35 152.9 110 63.6
BraA09t35864Z Brassica rapa HOM05D000358 ORTHO05D009346 2.9e-35 152.5 110 62.7
AL6G50280 Arabidopsis lyrata HOM05D000358 ORTHO05D009346 3.8e-35 152.1 160 51.9
BcaC03g16171 Brassica carinata HOM05D000358 ORTHO05D009346 3.8e-35 152.1 101 67.3
A02p24950 Brassica napus HOM05D000358 ORTHO05D009346 3.8e-35 152.1 101 67.3
C02p39090 Brassica napus HOM05D000358 ORTHO05D009346 3.8e-35 152.1 101 67.3
BolC2t09919H Brassica oleracea HOM05D000358 ORTHO05D009346 3.8e-35 152.1 101 67.3
BraA02t07485Z Brassica rapa HOM05D000358 ORTHO05D009346 3.8e-35 152.1 101 67.3
BolC9t53153H Brassica oleracea HOM05D000358 ORTHO05D009346 5.0e-35 151.8 110 61.8
BcaC04g24011 Brassica carinata HOM05D000358 ORTHO05D009346 6.5e-35 151.4 110 61.8
BcaB05g23661 Brassica carinata HOM05D000358 ORTHO05D009346 1.1e-34 150.6 101 66.3
CARHR251060 Cardamine hirsuta HOM05D000358 ORTHO05D009346 1.4e-34 150.2 153 51.6
vmacro02584 Vaccinium macrocarpon HOM05D000358 ORTHO05D009346 3.6e-33 145.6 143 53.1
THA.LOC104801239 Tarenaya hassleriana HOM05D000358 ORTHO05D009346 4.7e-33 145.2 107 58.9
HPP92_009591 Vanilla planifolia HOM05D002842 ORTHO05D003177 2.3e-32 142.9 149 50.3
Aa31LG5G2370 Aethionema arabicum HOM05D000358 ORTHO05D009346 3.9e-32 142.1 96 66.7
COL.COLO4_09074 Corchorus olitorius HOM05D000358 ORTHO05D009346 1.1e-31 140.6 150 52.7
ATR0332G065 Amborella trichopoda HOM05D000358 ORTHO05D009346 2.0e-31 139.8 142 52.8
VMungo1383G1528 Vigna mungo HOM05D000358 ORTHO05D009346 2.0e-31 139.8 143 51.7
C09p02250 Brassica napus HOM05D000358 ORTHO05D009346 3.7e-30 135.6 134 50.0
Mapoly0004s0031 Marchantia polymorpha HOM05D000358 ORTHO05D009346 4.8e-30 135.2 135 50.4
PGSC0003DMG400019331 Solanum tuberosum HOM05D000358 ORTHO05D009346 4.8e-30 135.2 114 60.5
Lalb_Chr01g0020121 Lupinus albus HOM05D000358 ORTHO05D009346 8.2e-30 134.4 99 60.6
Pp3c26_14500 Physcomitrium patens HOM05D000358 ORTHO05D009346 3.1e-29 132.5 128 48.4
CDE02G2742 Ceratophyllum demersum HOM05D006420 ORTHO05D008009 4.1e-29 132.1 92 66.3
Hma1.2p1_0822F.1_g224410 Hydrangea macrophylla HOM05D000358 ORTHO05D009346 7.0e-29 131.3 90 66.7
Hma1.2p1_0822F.1_g224420 Hydrangea macrophylla HOM05D000358 ORTHO05D009346 9.1e-29 131.0 86 70.9
Psat3g063840 Pisum sativum HOM05D000358 ORTHO05D009346 9.1e-29 131.0 140 51.4
SMO180G0003 Selaginella moellendorffii HOM05D000358 ORTHO05D009346 1.7e-27 126.7 94 60.6
SMO340G0322 Selaginella moellendorffii HOM05D000104 ORTHO05D004059 1.7e-27 126.7 94 60.6
Sc17g0001440 Simmondsia chinensis HOM05D000358 ORTHO05D009346 1.7e-27 126.7 79 72.2
Haze_04693 Corylus avellana HOM05D000358 ORTHO05D009346 5.5e-26 121.7 143 50.3
ClCG07G000330 Citrullus lanatus HOM05D000358 ORTHO05D009346 8.0e-25 117.9 155 46.5
Atru.BG.13.p Acer truncatum HOM05D000358 ORTHO05D009346 1.4e-24 117.1 103 56.3
AagrBONN_evm.TU.Sc2ySwM_362.2722 Anthoceros agrestis HOM05D000358 ORTHO05D009346 9.7e-23 110.9 97 56.7
Eucgr.L00778 Eucalyptus grandis HOM05D000358 ORTHO05D009346 7.0e-21 104.8 69 71.0
unitig_899.g15068 Utricularia gibba HOM05D000454 ORTHO05D000591 2.2e-19 99.8 71 67.6
Eucgr.C01960 Eucalyptus grandis HOM05D000358 ORTHO05D009346 2.0e-15 86.7 56 71.4
Oeu029468.1 Olea europaea HOM05D000358 ORTHO05D009346 2.6e-15 86.3 101 53.5
Ah.11g050550 Amaranthus hybridus HOM05D000358 ORTHO05D009346 8.3e-14 81.3 144 40.3
QL12p021343 Quercus lobata HOM05D000358 ORTHO05D009346 5.0e-11 72.0 91 48.4
MELO3C014393.2 Cucumis melo HOM05D000358 ORTHO05D009346 9.4e-10 67.8 67 52.2
Nn1g02275 Nelumbo nucifera HOM05D000358 ORTHO05D009346 9.4e-10 67.8 105 41.9
FAN20G1711 Fragaria x ananassa HOM05D000358 ORTHO05D009346 8.3e-06 54.7 159 30.2


User provided reference genes

Program Settings