Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G4465 Salvia bowleyana HOM05D003379 ORTHO05D003862 1.1e-63 246.9 163 100.0
MSTRG.2062 Avicennia marina HOM05D003379 ORTHO05D003862 8.9e-26 120.9 141 59.6
Migut.E00693 Erythranthe guttata HOM05D003379 ORTHO05D003862 5.4e-23 111.7 143 60.1
SGA_v2.0_scaffold306G48013 Striga asiatica HOM05D003379 ORTHO05D003862 3.3e-20 102.4 143 46.2
Oeu027918.1 Olea europaea HOM05D003379 ORTHO05D003862 3.0e-13 79.3 150 39.3
CiPaw.04G001500 Carya illinoinensis HOM05D003379 ORTHO05D003862 3.9e-13 79.0 155 32.9
Cfa007165 Carpinus fangiana HOM05D003379 ORTHO05D003862 6.6e-13 78.2 150 46.0
Dinv25618 Davidia involucrata HOM05D003379 ORTHO05D003862 1.9e-12 76.6 157 36.3
Haze_14949 Corylus avellana HOM05D003379 ORTHO05D003862 7.3e-12 74.7 156 41.7
Atru.chr6.2693 Acer truncatum HOM05D003379 ORTHO05D003862 1.2e-11 73.9 146 35.6
PGR142G1656 Punica granatum HOM05D003379 ORTHO05D003862 1.6e-11 73.6 153 33.3
Thecc.04G047800 Theobroma cacao HOM05D003379 ORTHO05D003862 1.4e-10 70.5 148 39.2
Duzib187G1855 Durio zibethinus HOM05D003379 ORTHO05D003862 4.0e-10 68.9 147 36.7
Dinv01473 Davidia involucrata HOM05D003379 ORTHO05D003862 5.2e-10 68.6 148 32.4
Ciclev10015333m.g Citrus clementina HOM05D003379 ORTHO05D003862 6.8e-10 68.2 149 33.6
MELO3C014781.2 Cucumis melo HOM05D003379 ORTHO05D003862 8.9e-10 67.8 147 30.6
Nn4g22138 Nelumbo nucifera HOM05D003379 ORTHO05D003862 1.5e-09 67.0 142 34.5
Hund04187 Selenicereus undatus HOM05D003379 ORTHO05D003862 5.8e-09 65.1 143 35.7
TWI32G0366 Tripterygium wilfordii HOM05D003379 ORTHO05D003862 7.5e-09 64.7 148 33.1
HanXRQChr17g0550921 Helianthus annuus HOM05D003379 ORTHO05D003862 9.8e-09 64.3 161 32.9
COL.COLO4_13374 Corchorus olitorius HOM05D003379 ORTHO05D003862 1.3e-08 63.9 151 40.4
Manes.09G187602 Manihot esculenta HOM05D003379 ORTHO05D003862 1.3e-08 63.9 43 62.8
CANSAT64G2275 Cannabis sativa HOM05D003379 ORTHO05D003862 1.7e-08 63.5 152 39.5
CAN.G1061.1 Capsicum annuum HOM05D003379 ORTHO05D003862 1.7e-08 63.5 154 33.8
Dinv19304 Davidia involucrata HOM05D003379 ORTHO05D003862 2.2e-08 63.2 156 28.8
Sed0002814 Sechium edule HOM05D003379 ORTHO05D003862 2.9e-08 62.8 152 32.2
CSS0041611 Camellia sinensis var. sinensis HOM05D003379 ORTHO05D003862 3.7e-08 62.4 86 43.0
Manes.11G076800 Manihot esculenta HOM05D003379 ORTHO05D003862 3.7e-08 62.4 159 32.7
CsaV3_3G027780 Cucumis sativus L. HOM05D003379 ORTHO05D003862 4.9e-08 62.0 162 31.5
Potri.002G238100 Populus trichocarpa HOM05D003379 ORTHO05D003862 4.9e-08 62.0 158 33.5
Ah.03g136390 Amaranthus hybridus HOM05D003379 ORTHO05D003862 6.4e-08 61.6 48 58.3
CiPaw.06G109000 Carya illinoinensis HOM05D003379 ORTHO05D003862 6.4e-08 61.6 153 32.0
MD17G1006900 Malus domestica HOM05D003379 ORTHO05D003862 6.4e-08 61.6 150 40.0
Nitab4.5_0007209g0030 Nicotiana tabacum HOM05D000225 ORTHO05D001595 8.3e-08 61.2 97 42.3
Sabra02G0181500 Salix brachista HOM05D003379 ORTHO05D003862 8.3e-08 61.2 147 32.0
MD09G1002700 Malus domestica HOM05D003379 ORTHO05D003862 1.1e-07 60.8 57 54.4
Nitab4.5_0001409g0240 Nicotiana tabacum HOM05D000225 ORTHO05D001595 1.1e-07 60.8 96 45.8
vmacro18379 Vaccinium macrocarpon HOM05D003379 ORTHO05D003862 1.1e-07 60.8 151 39.7
Cpa.g.sc70.68 Carica papaya HOM05D003379 ORTHO05D003862 1.9e-07 60.1 156 39.7
QL02p069539 Quercus lobata HOM05D003379 ORTHO05D003862 1.9e-07 60.1 163 33.7
Sed0021165 Sechium edule HOM05D003379 ORTHO05D003862 1.9e-07 60.1 159 31.4
Actinidia36245 Actinidia chinensis HOM05D003379 ORTHO05D003862 2.4e-07 59.7 57 52.6
Cfa009444 Carpinus fangiana HOM05D003379 ORTHO05D003862 3.2e-07 59.3 82 41.5
MBI07_g41898_MAGBIO Magnolia biondii HOM05D003379 ORTHO05D003862 3.2e-07 59.3 47 61.7
Prupe.3G313500 Prunus persica HOM05D003379 ORTHO05D003862 3.2e-07 59.3 48 62.5
TAR475G0001 Trochodendron aralioides HOM05D003379 ORTHO05D003862 4.1e-07 58.9 52 55.8
Aqoxy6G00186 Aquilegia oxysepala HOM05D003379 ORTHO05D003862 5.4e-07 58.5 60 50.0
TAR374G0325 Trochodendron aralioides HOM05D003379 ORTHO05D003862 5.4e-07 58.5 141 29.8
ClCG05G012630 Citrullus lanatus HOM05D003379 ORTHO05D003862 7.1e-07 58.2 162 29.6
Cc07_g01280 Coffea canephora HOM05D003379 ORTHO05D003862 7.1e-07 58.2 154 31.8
Gohir.A07G232700 Gossypium hirsutum HOM05D003379 ORTHO05D003862 7.1e-07 58.2 148 39.9
Lj7A617T72 Lonicera japonica HOM05D003379 ORTHO05D003862 7.1e-07 58.2 64 46.9
Prupe.1G216200 Prunus persica HOM05D003379 ORTHO05D003862 7.1e-07 58.2 69 43.5
Sc03g0005220 Simmondsia chinensis HOM05D003379 ORTHO05D003862 7.1e-07 58.2 149 32.9
Solyc02g091940.3 Solanum lycopersicum HOM05D003379 ORTHO05D003862 7.1e-07 58.2 156 32.1
Gorai.005G196800 Gossypium raimondii HOM05D003379 ORTHO05D003862 9.2e-07 57.8 45 55.6
RcHm_v2.0_Chr2g0176501 Rosa chinensis HOM05D003379 ORTHO05D003862 1.2e-06 57.4 82 46.3
Haze_12496 Corylus avellana HOM05D003379 ORTHO05D003862 1.6e-06 57.0 59 49.2
Hma1.2p1_0787F.1_g217850 Hydrangea macrophylla HOM05D003379 ORTHO05D003862 2.1e-06 56.6 93 36.6
Lsat_1_v5_gn_0_41321 Lactuca sativa HOM05D003379 ORTHO05D003862 2.1e-06 56.6 102 34.3
EL10Ac6g13403 Beta vulgaris HOM05D003379 ORTHO05D003862 2.7e-06 56.2 52 53.8
DCAR_002970 Daucus carota HOM05D003379 ORTHO05D003862 2.7e-06 56.2 50 56.0
FAN07G0868 Fragaria x ananassa HOM05D003379 ORTHO05D003862 2.7e-06 56.2 60 45.0
Gohir.D07G239900 Gossypium hirsutum HOM05D003379 ORTHO05D003862 2.7e-06 56.2 149 40.3
Sopen02g036510 Solanum pennellii HOM05D003379 ORTHO05D003862 2.7e-06 56.2 156 32.7
PGSC0003DMG400021424 Solanum tuberosum HOM05D003379 ORTHO05D003862 3.5e-06 55.8 156 32.7
ATR0582G197 Amborella trichopoda HOM05D003379 ORTHO05D003862 6.0e-06 55.1 55 41.8
Gohir.D02G175200 Gossypium hirsutum HOM05D003379 ORTHO05D003862 6.0e-06 55.1 45 55.6
Actinidia30590 Actinidia chinensis HOM05D003379 ORTHO05D003862 7.8e-06 54.7 141 38.3
Duzib132G1102 Durio zibethinus HOM05D003379 ORTHO05D003862 7.8e-06 54.7 45 51.1


User provided reference genes

Program Settings