Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G4398 Salvia bowleyana HOM05D006466 ORTHO05D008084 1.9e-93 346.3 181 100.0
Migut.A00968 Erythranthe guttata HOM05D006466 ORTHO05D008084 1.6e-63 246.9 178 73.0
SGA_v2.0_scaffold120G32877 Striga asiatica HOM05D006466 ORTHO05D008084 2.7e-63 246.1 183 71.6
MSTRG.12091 Avicennia marina HOM05D006466 ORTHO05D008084 1.8e-62 243.4 183 73.2
unitig_61.g26196 Utricularia gibba HOM05D006466 ORTHO05D008084 2.6e-53 213.0 181 64.6
QL12p012545 Quercus lobata HOM05D006466 ORTHO05D008084 8.6e-49 198.0 179 63.1
Ah.12g056750 Amaranthus hybridus HOM05D006466 ORTHO05D008084 1.1e-48 197.6 174 66.1
Lj4g0024258 Lotus japonicus HOM05D006466 ORTHO05D008084 7.3e-48 194.9 181 61.9
FAN08G0853 Fragaria x ananassa HOM05D006466 ORTHO05D008084 9.5e-48 194.5 182 63.2
Lsat_1_v5_gn_3_521 Lactuca sativa HOM05D006466 ORTHO05D008084 9.5e-48 194.5 186 65.6
TWI81G0148 Tripterygium wilfordii HOM05D006466 ORTHO05D008084 1.2e-47 194.1 181 63.0
Cc08_g12600 Coffea canephora HOM05D006466 ORTHO05D008084 4.7e-47 192.2 176 64.2
Gohir.A12G217700 Gossypium hirsutum HOM05D006466 ORTHO05D008084 6.1e-47 191.8 179 64.2
Gorai.008G235900 Gossypium raimondii HOM05D006466 ORTHO05D008084 6.1e-47 191.8 179 64.2
FvH4_5g18710 Fragaria vesca HOM05D006466 ORTHO05D008084 1.4e-46 190.7 182 63.7
FAN04G2180 Fragaria x ananassa HOM05D006466 ORTHO05D008084 1.4e-46 190.7 182 63.7
FAN18G0606 Fragaria x ananassa HOM05D006466 ORTHO05D008084 1.4e-46 190.7 182 63.7
FAN13G1623 Fragaria x ananassa HOM05D006466 ORTHO05D008084 2.3e-46 189.9 182 61.5
Gohir.D12G220200 Gossypium hirsutum HOM05D006466 ORTHO05D008084 4.0e-46 189.1 179 63.7
Nitab4.5_0000312g0170 Nicotiana tabacum HOM05D006466 ORTHO05D008084 4.0e-46 189.1 177 59.9
DCAR_008489 Daucus carota HOM05D005079 ORTHO05D006362 6.8e-46 188.3 175 62.3
Manes.01G079600 Manihot esculenta HOM05D006466 ORTHO05D008084 1.2e-45 187.6 178 60.7
Thecc.03G253200 Theobroma cacao HOM05D006466 ORTHO05D008084 1.2e-45 187.6 178 62.9
Atru.chr2.1841 Acer truncatum HOM05D006466 ORTHO05D008084 1.5e-45 187.2 176 61.4
CsaV3_5G004180 Cucumis sativus L. HOM05D006466 ORTHO05D008084 1.5e-45 187.2 182 59.3
Nitab4.5_0008481g0010 Nicotiana tabacum HOM05D006466 ORTHO05D008084 1.5e-45 187.2 177 59.9
Manes.15G178400 Manihot esculenta HOM05D006466 ORTHO05D008084 2.0e-45 186.8 178 60.1
Haze_07889 Corylus avellana HOM05D006466 ORTHO05D008084 2.6e-45 186.4 182 61.0
ECA232G3467 Erigeron canadensis HOM05D006466 ORTHO05D008084 2.6e-45 186.4 178 63.5
PGR031G1557 Punica granatum HOM05D006466 ORTHO05D008084 2.6e-45 186.4 177 61.0
ClCG01G004000 Citrullus lanatus HOM05D006466 ORTHO05D008084 4.4e-45 185.7 183 59.6
MELO3C005537.2 Cucumis melo HOM05D006466 ORTHO05D008084 4.4e-45 185.7 178 60.1
Hma1.2p1_2380F.1_g320960 Hydrangea macrophylla HOM05D006466 ORTHO05D008084 5.7e-45 185.3 187 62.0
CANSAT21G1921 Cannabis sativa HOM05D006466 ORTHO05D008084 9.8e-45 184.5 180 59.4
RcHm_v2.0_Chr7g0203001 Rosa chinensis HOM05D006466 ORTHO05D008084 1.3e-44 184.1 177 62.7
Ciclev10005762m.g Citrus clementina HOM05D006466 ORTHO05D008084 2.2e-44 183.3 177 61.6
Potri.001G123200 Populus trichocarpa HOM05D006466 ORTHO05D008084 2.2e-44 183.3 178 59.6
Eucgr.D02068 Eucalyptus grandis HOM05D006466 ORTHO05D008084 2.9e-44 183.0 174 59.2
Medtr4g101030 Medicago truncatula HOM05D006466 ORTHO05D008084 2.9e-44 183.0 175 59.4
Rhsim07G0108000 Rhododendron simsii HOM05D006466 ORTHO05D008084 8.3e-44 181.4 179 63.1
Manes.15G178500 Manihot esculenta HOM05D006466 ORTHO05D008084 1.8e-43 180.3 178 60.1
Actinidia27463 Actinidia chinensis HOM05D006466 ORTHO05D008084 2.4e-43 179.9 181 60.8
Sabra01G0094900 Salix brachista HOM05D006466 ORTHO05D008084 2.4e-43 179.9 178 58.4
Cfa012739 Carpinus fangiana HOM05D006466 ORTHO05D008084 4.1e-43 179.1 180 60.0
Dinv39131 Davidia involucrata HOM05D006466 ORTHO05D008084 7.0e-43 178.3 181 59.7
Solyc08g078740.1 Solanum lycopersicum HOM05D006466 ORTHO05D008084 1.2e-42 177.6 177 58.8
Sopen08g027210 Solanum pennellii HOM05D006466 ORTHO05D008084 1.2e-42 177.6 177 58.8
MD04G1088600 Malus domestica HOM05D006466 ORTHO05D008084 1.6e-42 177.2 180 58.9
PGSC0003DMG401004755 Solanum tuberosum HOM05D006466 ORTHO05D008084 2.0e-42 176.8 179 58.1
Psat4g071640 Pisum sativum HOM05D006466 ORTHO05D008084 3.5e-42 176.0 176 58.5
Sed0026776 Sechium edule HOM05D006466 ORTHO05D008084 7.8e-42 174.9 181 56.9
Lj1A353T9 Lonicera japonica HOM05D006466 ORTHO05D008084 1.3e-41 174.1 181 59.1
GSVIVG01001313001 Vitis vinifera HOM05D006466 ORTHO05D008084 1.3e-41 174.1 178 56.7
Prupe.5G071300 Prunus persica HOM05D006466 ORTHO05D008084 1.7e-41 173.7 184 57.6
Sed0012351 Sechium edule HOM05D006466 ORTHO05D008084 6.6e-41 171.8 174 59.8
TPR.G37616 Trifolium pratense HOM05D006466 ORTHO05D008084 2.5e-40 169.9 186 54.8
Peaxi162Scf00002g00172 Petunia axillaris HOM05D006466 ORTHO05D008084 4.3e-40 169.1 197 53.8
SHI10480 Sapria himalayana HOM05D006466 ORTHO05D008084 1.2e-39 167.5 186 54.3
CiPaw.11G153200 Carya illinoinensis HOM05D006466 ORTHO05D008084 4.7e-39 165.6 178 54.5
TAR375G0032 Trochodendron aralioides HOM05D006466 ORTHO05D008084 1.8e-38 163.7 184 56.0
CDE02G4728 Ceratophyllum demersum HOM05D006466 ORTHO05D008084 1.5e-37 160.6 181 53.0
Aa31LG2G12660 Aethionema arabicum HOM05D006466 ORTHO05D008084 2.0e-37 160.2 186 52.7
GSVIVG01030884001 Vitis vinifera HOM05D006466 ORTHO05D008084 1.7e-36 157.1 174 55.2
ATR0193G040 Amborella trichopoda HOM05D006466 ORTHO05D008084 2.2e-36 156.8 178 51.7
Thhalv10026056m.g Eutrema salsugineum HOM05D006466 ORTHO05D008084 2.2e-36 156.8 188 53.2
Nn1g01036 Nelumbo nucifera HOM05D006466 ORTHO05D008084 2.9e-36 156.4 172 54.1
A03p49940 Brassica napus HOM05D006466 ORTHO05D008084 6.4e-36 155.2 183 51.9
BraA03t14087Z Brassica rapa HOM05D006466 ORTHO05D008084 6.4e-36 155.2 183 51.9
Cpa.g.sc29.144 Carica papaya HOM05D006466 ORTHO05D008084 6.4e-36 155.2 188 51.1
AUR62007505 Chenopodium quinoa HOM05D006466 ORTHO05D008084 6.4e-36 155.2 174 54.6
arahy.Tifrunner.gnm1.ann1.MY6G43 Arachis hypogaea HOM05D006466 ORTHO05D008084 8.3e-36 154.8 184 52.2
BcaNung02868 Brassica carinata HOM05D006466 ORTHO05D008084 1.1e-35 154.5 185 52.4
Lalb_Chr16g0389331 Lupinus albus HOM05D006466 ORTHO05D008084 1.1e-35 154.5 176 54.0
arahy.Tifrunner.gnm1.ann1.VT8LY8 Arachis hypogaea HOM05D006466 ORTHO05D008084 3.2e-35 152.9 180 53.3
Carub.0007s2494 Capsella rubella HOM05D006466 ORTHO05D008084 4.1e-35 152.5 186 52.2
Ca_21959_v3 Cicer arietinum L. HOM05D006466 ORTHO05D008084 4.1e-35 152.5 176 51.7
PSO528G0015 Papaver somniferum HOM05D006466 ORTHO05D008084 7.0e-35 151.8 182 51.6
Sp7g15110 Schrenkiella parvula HOM05D006466 ORTHO05D008084 7.0e-35 151.8 190 50.0
CARHR222950 Cardamine hirsuta HOM05D006466 ORTHO05D008084 9.2e-35 151.4 187 52.4
Lj8A452G56 Lonicera japonica HOM05D006466 ORTHO05D008084 9.2e-35 151.4 157 59.9
Nn6g33981 Nelumbo nucifera HOM05D006466 ORTHO05D008084 9.2e-35 151.4 180 53.9
PSO170G1975 Papaver somniferum HOM05D006466 ORTHO05D008084 9.2e-35 151.4 182 51.1
Oeu019590.1 Olea europaea HOM05D006466 ORTHO05D008084 3.5e-34 149.4 154 61.0
AL7G38350 Arabidopsis lyrata HOM05D006466 ORTHO05D008084 4.6e-34 149.1 190 51.1
AL7G38400 Arabidopsis lyrata HOM05D006466 ORTHO05D008084 4.6e-34 149.1 190 51.1
BcaC06g33488 Brassica carinata HOM05D006466 ORTHO05D008084 6.0e-34 148.7 184 50.0
C07p47980 Brassica napus HOM05D006466 ORTHO05D008084 6.0e-34 148.7 184 50.0
BolC7t45321H Brassica oleracea HOM05D006466 ORTHO05D008084 6.0e-34 148.7 184 50.0
Aqoxy6G01886 Aquilegia oxysepala HOM05D006466 ORTHO05D008084 7.8e-34 148.3 184 50.0
arahy.Tifrunner.gnm1.ann1.LISY29 Arachis hypogaea HOM05D006466 ORTHO05D008084 7.8e-34 148.3 180 51.1
arahy.Tifrunner.gnm1.ann1.HK6I2L Arachis hypogaea HOM05D006466 ORTHO05D008084 1.3e-33 147.5 180 50.0
HPP92_014482 Vanilla planifolia HOM05D006466 ORTHO05D008084 1.3e-33 147.5 192 51.0
Phvul.003G219800 Phaseolus vulgaris HOM05D006466 ORTHO05D008084 1.1e-32 144.4 182 50.0
SEGI_30297 Sequoiadendron giganteum HOM05D006466 ORTHO05D008084 1.2e-31 141.0 174 51.7
Os10g0507500 Oryza sativa ssp. japonica HOM05D006466 ORTHO05D008084 8.1e-31 138.3 188 47.3
AT4G16535 Arabidopsis thaliana HOM05D006466 ORTHO05D008084 8.9e-30 134.8 184 47.8
Eucgr.D02058 Eucalyptus grandis HOM05D006466 ORTHO05D008084 2.0e-29 133.7 173 46.8
VMungo0251G3296 Vigna mungo HOM05D006466 ORTHO05D008084 4.9e-28 129.0 172 49.4
AUR62039958 Chenopodium quinoa HOM05D006466 ORTHO05D008084 3.5e-26 122.9 172 47.7
Glyma.17G140900 Glycine max HOM05D006466 ORTHO05D008084 1.5e-24 117.5 182 45.6
AagrBONN_evm.TU.Sc2ySwM_228.639 Anthoceros agrestis HOM05D007188 ORTHO05D009102 2.8e-23 113.2 189 41.3
CDE11G0010 Ceratophyllum demersum HOM05D006466 ORTHO05D008084 1.4e-22 110.9 155 47.1
Pp3c3_19850 Physcomitrium patens HOM05D006466 ORTHO05D008084 1.8e-22 110.5 202 40.1
Mapoly0015s0012 Marchantia polymorpha HOM05D006466 ORTHO05D008084 3.1e-22 109.8 187 37.4
arahy.Tifrunner.gnm1.ann1.Y2DLV0 Arachis hypogaea HOM05D006466 ORTHO05D008084 1.3e-20 104.4 123 49.6
arahy.Tifrunner.gnm1.ann1.AC5BZW Arachis hypogaea HOM05D006466 ORTHO05D008084 4.9e-20 102.4 153 47.1
Zm00001eb044010 Zea mays HOM05D006466 ORTHO05D008084 6.6e-17 92.0 112 51.8
Oeu039628.1 Olea europaea HOM05D006466 ORTHO05D008084 7.3e-16 88.6 53 81.1
arahy.Tifrunner.gnm1.ann1.W2BU8F Arachis hypogaea HOM05D004339 ORTHO05D002389 2.8e-15 86.7 151 44.4
Eucgr.L01522 Eucalyptus grandis HOM05D006466 ORTHO05D008084 9.0e-14 81.6 50 78.0
unitig_0.g1068 Utricularia gibba HOM05D006466 ORTHO05D008084 3.0e-09 66.6 42 66.7
HanXRQChr02g0051581 Helianthus annuus HOM05D006466 ORTHO05D008084 1.9e-08 63.9 52 67.3
BcaC01g01648 Brassica carinata HOM05D006466 ORTHO05D008084 3.6e-07 59.7 78 44.9
C03p73400 Brassica napus HOM05D006466 ORTHO05D008084 3.6e-07 59.7 83 43.4
Sc22g0000810 Simmondsia chinensis HOM05D006466 ORTHO05D008084 1.4e-06 57.8 42 71.4
C03p59450 Brassica napus HOM05D006466 ORTHO05D008084 2.4e-06 57.0 64 46.9
unitig_0.g1067 Utricularia gibba HOM05D006466 ORTHO05D008084 6.9e-06 55.5 73 50.7


User provided reference genes

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