Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G4367 Salvia bowleyana HOM05D007662 ORTHO05D009666 4.7e-32 140.6 71 100.0
SalBow8G2777 Salvia bowleyana HOM05D007662 ORTHO05D009666 4.7e-32 140.6 71 100.0
Rhsim02G0233800 Rhododendron simsii HOM05D007662 ORTHO05D009666 2.6e-14 81.6 49 83.7
Hma1.2p1_0972F.1_g242860 Hydrangea macrophylla HOM05D007662 ORTHO05D009666 7.5e-14 80.1 69 65.2
Rhsim02G0233900 Rhododendron simsii HOM05D007662 ORTHO05D009666 1.7e-13 79.0 66 69.7
Cpa.g.sc119.89 Carica papaya HOM05D007662 ORTHO05D009666 8.3e-13 76.6 47 78.7
Cc01_g01030 Coffea canephora HOM05D007662 ORTHO05D009666 1.9e-12 75.5 71 63.4
Oeu002702.1 Olea europaea HOM05D007662 ORTHO05D009666 1.9e-12 75.5 47 80.9
PGR119G1192 Punica granatum HOM05D007662 ORTHO05D009666 2.4e-12 75.1 63 66.7
PSO384G2541 Papaver somniferum HOM05D007662 ORTHO05D009666 5.4e-12 73.9 46 78.3
TWI32G0733 Tripterygium wilfordii HOM05D007662 ORTHO05D009666 7.1e-12 73.6 64 64.1
TAR623G1524 Trochodendron aralioides HOM05D007662 ORTHO05D009666 9.2e-12 73.2 49 79.6
CSS0010518 Camellia sinensis var. sinensis HOM05D007662 ORTHO05D009666 1.6e-11 72.4 48 77.1
Gorai.004G017900 Gossypium raimondii HOM05D007662 ORTHO05D009666 1.6e-11 72.4 64 64.1
COL.COLO4_10450 Corchorus olitorius HOM05D007662 ORTHO05D009666 2.1e-11 72.0 64 64.1
MBI13_g29646_MAGBIO Magnolia biondii HOM05D007662 ORTHO05D009666 2.1e-11 72.0 40 87.5
Manes.15G104500 Manihot esculenta HOM05D007662 ORTHO05D009666 2.1e-11 72.0 39 84.6
Potri.001G009501 Populus trichocarpa HOM05D007662 ORTHO05D009666 2.7e-11 71.6 39 84.6
Thecc.09G214700 Theobroma cacao HOM05D007662 ORTHO05D009666 2.7e-11 71.6 64 65.6
unitig_8.g3321 Utricularia gibba HOM05D007662 ORTHO05D009666 2.7e-11 71.6 43 79.1
CANSAT54G1122 Cannabis sativa HOM05D007662 ORTHO05D009666 3.5e-11 71.2 64 62.5
Gohir.D08G022600 Gossypium hirsutum HOM05D007662 ORTHO05D009666 3.5e-11 71.2 64 62.5
HanXRQChr02g0056871 Helianthus annuus HOM05D007662 ORTHO05D009666 3.5e-11 71.2 45 82.2
Sabra01G0007400 Salix brachista HOM05D007662 ORTHO05D009666 3.5e-11 71.2 39 82.1
Gohir.A08G012100 Gossypium hirsutum HOM05D007662 ORTHO05D009666 4.6e-11 70.9 64 62.5
Nn7g35960 Nelumbo nucifera HOM05D007662 ORTHO05D009666 4.6e-11 70.9 42 81.0
Lsat_1_v5_gn_6_51400 Lactuca sativa HOM05D007662 ORTHO05D009666 6.0e-11 70.5 68 60.3
Duzib168G0137 Durio zibethinus HOM05D007662 ORTHO05D009666 1.0e-10 69.7 46 73.9
Migut.N02119 Erythranthe guttata HOM05D007662 ORTHO05D009666 1.0e-10 69.7 63 68.3
Aa31LG8G17430 Aethionema arabicum HOM05D007662 ORTHO05D009666 1.3e-10 69.3 63 58.7
Peaxi162Scf00336g00087 Petunia axillaris HOM05D007662 ORTHO05D009666 1.3e-10 69.3 47 76.6
Sopen01g015220 Solanum pennellii HOM05D007662 ORTHO05D009666 1.3e-10 69.3 49 73.5
Carub.0003s3492 Capsella rubella HOM05D007662 ORTHO05D009666 1.7e-10 68.9 63 60.3
MD03G1011000 Malus domestica HOM05D007662 ORTHO05D009666 1.7e-10 68.9 43 76.7
Peaxi162Scf00451g00322 Petunia axillaris HOM05D007662 ORTHO05D009666 1.7e-10 68.9 38 86.8
Solyc01g020320.3 Solanum lycopersicum HOM05D007662 ORTHO05D009666 1.7e-10 68.9 49 73.5
PGSC0003DMG400015999 Solanum tuberosum HOM05D007662 ORTHO05D009666 1.7e-10 68.9 38 86.8
Carub.0003s3490 Capsella rubella HOM05D007662 ORTHO05D009666 2.3e-10 68.6 63 58.7
Glyma.18G180600 Glycine max HOM05D007662 ORTHO05D009666 2.3e-10 68.6 37 89.2
Lj1g0001682 Lotus japonicus HOM05D007662 ORTHO05D009666 2.3e-10 68.6 42 81.0
GSVIVG01025388001 Vitis vinifera HOM05D007662 ORTHO05D009666 2.3e-10 68.6 54 68.5
AL3G53480 Arabidopsis lyrata HOM05D007662 ORTHO05D009666 3.0e-10 68.2 63 58.7
AT2G20480 Arabidopsis thaliana HOM05D007662 ORTHO05D009666 3.0e-10 68.2 63 58.7
Haze_22992 Corylus avellana HOM05D007662 ORTHO05D009666 3.0e-10 68.2 59 59.3
Nitab4.5_0000488g0050 Nicotiana tabacum HOM05D007662 ORTHO05D009666 3.0e-10 68.2 49 71.4
Nitab4.5_0007654g0010 Nicotiana tabacum HOM05D007662 ORTHO05D009666 3.0e-10 68.2 64 57.8
Atru.chr3.2207 Acer truncatum HOM05D007662 ORTHO05D009666 3.9e-10 67.8 62 58.1
Prupe.6G011500 Prunus persica HOM05D007662 ORTHO05D009666 5.1e-10 67.4 38 86.8
FAN11G0548 Fragaria x ananassa HOM05D007662 ORTHO05D009666 6.6e-10 67.0 42 76.2
FAN21G0034 Fragaria x ananassa HOM05D007662 ORTHO05D009666 6.6e-10 67.0 42 76.2
FAN25G2111 Fragaria x ananassa HOM05D007662 ORTHO05D009666 6.6e-10 67.0 42 76.2
Glyma.07G131900 Glycine max HOM05D007662 ORTHO05D009666 6.6e-10 67.0 36 88.9
Phvul.008G106450 Phaseolus vulgaris HOM05D007662 ORTHO05D009666 6.6e-10 67.0 36 88.9
Aqoxy1G00152 Aquilegia oxysepala HOM05D007662 ORTHO05D009666 1.1e-09 66.2 45 68.9
CiPaw.12G007400 Carya illinoinensis HOM05D007662 ORTHO05D009666 1.1e-09 66.2 38 81.6
Thhalv10002142m.g Eutrema salsugineum HOM05D007662 ORTHO05D009666 1.1e-09 66.2 49 71.4
CARHR111030 Cardamine hirsuta HOM05D007662 ORTHO05D009666 1.5e-09 65.9 63 57.1
FAN16G0597 Fragaria x ananassa HOM05D007662 ORTHO05D009666 1.5e-09 65.9 42 76.2
Cfa009623 Carpinus fangiana HOM05D007662 ORTHO05D009666 1.9e-09 65.5 64 57.8
Manes.04G126551 Manihot esculenta HOM05D007662 ORTHO05D009666 1.9e-09 65.5 39 79.5
PGSC0003DMG400017905 Solanum tuberosum HOM05D007662 ORTHO05D009666 1.9e-09 65.5 38 84.2
ATR0598G132 Amborella trichopoda HOM05D007662 ORTHO05D009666 3.3e-09 64.7 45 71.1
RcHm_v2.0_Chr5g0081401 Rosa chinensis HOM05D007662 ORTHO05D009666 3.3e-09 64.7 55 67.3
arahy.Tifrunner.gnm1.ann1.MELV6S Arachis hypogaea HOM05D007662 ORTHO05D009666 4.3e-09 64.3 42 76.2
BcaB03g16842 Brassica carinata HOM05D007662 ORTHO05D009666 4.3e-09 64.3 40 80.0
Eucgr.B02616 Eucalyptus grandis HOM05D007662 ORTHO05D009666 4.3e-09 64.3 37 86.5
Eucgr.L03549 Eucalyptus grandis HOM05D007662 ORTHO05D009666 4.3e-09 64.3 37 86.5
DCAR_024358 Daucus carota HOM05D007662 ORTHO05D009666 5.6e-09 63.9 61 65.6
BcaC06g36736 Brassica carinata HOM05D007662 ORTHO05D009666 7.3e-09 63.5 63 60.3
C07p00560 Brassica napus HOM05D007662 ORTHO05D009666 7.3e-09 63.5 63 60.3
BolC7t40501H Brassica oleracea HOM05D007662 ORTHO05D009666 7.3e-09 63.5 63 60.3
Lalb_Chr03g0042221 Lupinus albus HOM05D007662 ORTHO05D009666 7.3e-09 63.5 36 86.1
Psat3g140280 Pisum sativum HOM05D007662 ORTHO05D009666 7.3e-09 63.5 36 86.1
Prupe.2G113800 Prunus persica HOM05D007662 ORTHO05D009666 7.3e-09 63.5 37 86.5
Medtr4g095740 Medicago truncatula HOM05D007662 ORTHO05D009666 9.5e-09 63.2 36 86.1
Os09g0446000 Oryza sativa ssp. japonica HOM05D007662 ORTHO05D009666 1.2e-08 62.8 37 78.4
A07p00270 Brassica napus HOM05D007662 ORTHO05D009666 1.6e-08 62.4 42 76.2
BraA07t27819Z Brassica rapa HOM05D007662 ORTHO05D009666 1.6e-08 62.4 42 76.2
Sed0021510 Sechium edule HOM05D007662 ORTHO05D009666 2.1e-08 62.0 41 75.6
arahy.Tifrunner.gnm1.ann1.0G84UH Arachis hypogaea HOM05D007662 ORTHO05D009666 2.8e-08 61.6 42 73.8
Sp3g33680 Schrenkiella parvula HOM05D007662 ORTHO05D009666 3.6e-08 61.2 63 58.7
CsaV3_4G023520 Cucumis sativus L. HOM05D007662 ORTHO05D009666 4.7e-08 60.8 41 75.6
C08p42210 Brassica napus HOM05D007662 ORTHO05D009666 6.2e-08 60.5 48 66.7
BolC8t51780H Brassica oleracea HOM05D007662 ORTHO05D009666 1.1e-07 59.7 46 69.6
ECA233G5312 Erigeron canadensis HOM05D007662 ORTHO05D009666 1.8e-07 58.9 38 73.7
BcaB08g34910 Brassica carinata HOM05D007662 ORTHO05D009666 2.4e-07 58.5 56 58.9
ClCG02G023850 Citrullus lanatus HOM05D007662 ORTHO05D009666 2.4e-07 58.5 41 70.7
Zm00001eb314380 Zea mays HOM05D007662 ORTHO05D009666 2.4e-07 58.5 62 51.6
BcaC07g41215 Brassica carinata HOM05D007662 ORTHO05D009666 4.0e-07 57.8 64 57.8
A09p58880 Brassica napus HOM05D007662 ORTHO05D009666 4.0e-07 57.8 38 73.7
BraA09t41274Z Brassica rapa HOM05D007662 ORTHO05D009666 4.0e-07 57.8 38 73.7
Hund07566 Selenicereus undatus HOM05D007662 ORTHO05D009666 1.2e-06 56.2 48 58.3
HPP92_019156 Vanilla planifolia HOM05D007662 ORTHO05D009666 1.2e-06 56.2 43 62.8
EL10Ac4g10342 Beta vulgaris HOM05D007662 ORTHO05D009666 1.5e-06 55.8 51 52.9
SEGI_07868 Sequoiadendron giganteum HOM05D007662 ORTHO05D009666 7.6e-06 53.5 42 59.5


User provided reference genes

Program Settings