Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G4332 Salvia bowleyana HOM05D005023 ORTHO05D006009 1.4e-195 686.0 339 100.0
SalBow6G3383 Salvia bowleyana HOM05D005023 ORTHO05D006009 1.0e-164 583.6 300 96.3
SalBow6G6227 Salvia bowleyana HOM05D005023 ORTHO05D006009 1.0e-164 583.6 300 96.3
SalBow6G3524 Salvia bowleyana HOM05D005023 ORTHO05D006009 2.2e-164 582.4 289 99.3
SalBow6G1717 Salvia bowleyana HOM05D005023 ORTHO05D006009 5.0e-164 581.3 291 98.3
SalBow6G3389 Salvia bowleyana HOM05D005023 ORTHO05D006009 6.5e-164 580.9 291 97.9
SalBow6G6031 Salvia bowleyana HOM05D005023 ORTHO05D006009 1.9e-163 579.3 291 97.9
SalBow6G2872 Salvia bowleyana HOM05D005023 ORTHO05D006009 2.5e-163 578.9 288 99.3
SalBow6G6846 Salvia bowleyana HOM05D005023 ORTHO05D006009 7.0e-158 560.8 285 96.8
SalBow6G6255 Salvia bowleyana HOM05D005023 ORTHO05D006009 9.1e-158 560.5 285 96.8
SalBow6G4088 Salvia bowleyana HOM05D005023 ORTHO05D006009 3.2e-147 525.4 265 98.1
SalBow8G0269 Salvia bowleyana HOM05D005023 ORTHO05D006009 1.3e-143 513.5 266 96.2
SalBow6G3781 Salvia bowleyana HOM05D005023 ORTHO05D006009 5.0e-140 501.5 249 98.4
SalBow6G0983 Salvia bowleyana HOM05D005023 ORTHO05D006009 3.6e-106 389.0 259 80.3
SalBow6G0969 Salvia bowleyana HOM05D005023 ORTHO05D006009 7.3e-99 364.8 186 97.8
SalBow6G5471 Salvia bowleyana HOM05D005023 ORTHO05D006009 3.2e-94 349.4 180 96.7
SalBow6G6268 Salvia bowleyana HOM05D005023 ORTHO05D006009 9.3e-94 347.8 178 95.5
SalBow6G1311 Salvia bowleyana HOM05D005023 ORTHO05D006009 2.7e-93 346.3 180 96.1
SalBow6G0951 Salvia bowleyana HOM05D005023 ORTHO05D006009 2.0e-88 330.1 162 98.1
Migut.E00780 Erythranthe guttata HOM05D005023 ORTHO05D006009 4.8e-82 308.9 266 59.4
SGA_v2.0_scaffold6G03150 Striga asiatica HOM05D005023 ORTHO05D006009 9.9e-80 301.2 285 56.1
MSTRG.1995 Avicennia marina HOM05D005023 ORTHO05D006009 2.2e-79 300.1 267 60.7
Nitab4.5_0002380g0110 Nicotiana tabacum HOM05D005023 ORTHO05D006009 8.2e-66 255.0 281 47.7
PGSC0003DMG400014810 Solanum tuberosum HOM05D005023 ORTHO05D006009 8.2e-66 255.0 281 48.0
Cc08_g03230 Coffea canephora HOM05D005023 ORTHO05D006009 9.0e-65 251.5 262 48.5
Lj2A234G45 Lonicera japonica HOM05D005023 ORTHO05D006009 3.8e-63 246.1 311 45.0
Solyc08g076570.3 Solanum lycopersicum HOM05D005023 ORTHO05D006009 5.0e-63 245.7 289 45.3
Sopen08g025130 Solanum pennellii HOM05D005023 ORTHO05D006009 1.1e-62 244.6 269 47.6
Nitab4.5_0004669g0010 Nicotiana tabacum HOM05D005023 ORTHO05D006009 3.2e-62 243.0 245 49.4
Nitab4.5_0004839g0010 Nicotiana tabacum HOM05D005023 ORTHO05D006009 5.5e-62 242.3 281 45.6
Peaxi162Scf00170g00918 Petunia axillaris HOM05D005023 ORTHO05D006009 5.5e-62 242.3 268 48.1
Dinv28986 Davidia involucrata HOM05D005023 ORTHO05D006009 7.2e-62 241.9 245 50.6
Nitab4.5_0000353g0050 Nicotiana tabacum HOM05D005023 ORTHO05D006009 2.7e-61 240.0 280 46.4
CSS0008599 Camellia sinensis var. sinensis HOM05D005023 ORTHO05D006009 2.3e-60 236.9 246 49.6
QL12p004398 Quercus lobata HOM05D005023 ORTHO05D006009 7.4e-59 231.9 262 46.6
CAN.G298.60 Capsicum annuum HOM05D005023 ORTHO05D006009 1.7e-58 230.7 285 44.9
CAN.G298.61 Capsicum annuum HOM05D005023 ORTHO05D006009 1.7e-58 230.7 285 44.9
CAN.G726.32 Capsicum annuum HOM05D005023 ORTHO05D006009 1.7e-58 230.7 285 44.9
Actinidia25987 Actinidia chinensis HOM05D005023 ORTHO05D006009 2.2e-58 230.3 245 49.4
Actinidia09175 Actinidia chinensis HOM05D005023 ORTHO05D006009 3.7e-58 229.6 246 48.0
CiPaw.11G096900 Carya illinoinensis HOM05D005023 ORTHO05D006009 4.8e-58 229.2 252 47.6
vmacro00304 Vaccinium macrocarpon HOM05D005023 ORTHO05D006009 1.1e-57 228.0 256 49.6
PSO170G6706 Papaver somniferum HOM05D005023 ORTHO05D006009 9.1e-57 224.9 258 47.3
Hma1.2p1_2161F.1_g315620 Hydrangea macrophylla HOM05D005023 ORTHO05D006009 1.5e-56 224.2 246 48.8
SalBow6G0459 Salvia bowleyana HOM05D005023 ORTHO05D006009 2.0e-56 223.8 106 99.1
PSO302G0152 Papaver somniferum HOM05D005023 ORTHO05D006009 2.6e-56 223.4 257 47.5
Potri.003G095200 Populus trichocarpa HOM05D005023 ORTHO05D006009 2.6e-56 223.4 251 48.6
Rhsim07G0130800 Rhododendron simsii HOM05D005023 ORTHO05D006009 3.4e-56 223.0 244 49.6
Aqoxy1G01584 Aquilegia oxysepala HOM05D005023 ORTHO05D006009 5.9e-56 222.2 243 46.1
Manes.02G223400 Manihot esculenta HOM05D005023 ORTHO05D006009 1.7e-55 220.7 248 48.4
MD06G1038100 Malus domestica HOM05D005023 ORTHO05D006009 7.2e-54 215.3 259 43.2
Cfa012488 Carpinus fangiana HOM05D005023 ORTHO05D006009 9.4e-54 214.9 254 42.9
TWI60G0688 Tripterygium wilfordii HOM05D005023 ORTHO05D006009 2.7e-53 213.4 275 43.3
COL.COLO4_16967 Corchorus olitorius HOM05D005023 ORTHO05D006009 6.1e-53 212.2 249 45.8
RcHm_v2.0_Chr7g0211361 Rosa chinensis HOM05D005023 ORTHO05D006009 6.1e-53 212.2 248 44.0
Ciclev10016033m.g Citrus clementina HOM05D005023 ORTHO05D006009 7.9e-53 211.8 254 45.3
Lsat_1_v5_gn_6_80180 Lactuca sativa HOM05D005023 ORTHO05D006009 1.4e-52 211.1 272 41.2
Prupe.5G030700 Prunus persica HOM05D005023 ORTHO05D006009 1.4e-52 211.1 263 43.7
Cpa.g.sc90.15 Carica papaya HOM05D005023 ORTHO05D006009 1.8e-52 210.7 257 44.4
Phvul.009G009200 Phaseolus vulgaris HOM05D005023 ORTHO05D006009 3.0e-52 209.9 275 42.9
Thecc.03G307500 Theobroma cacao HOM05D005023 ORTHO05D006009 5.1e-52 209.1 243 46.9
DCAR_031128 Daucus carota HOM05D005023 ORTHO05D006009 6.7e-52 208.8 258 43.4
FvH4_5g22760 Fragaria vesca HOM05D005023 ORTHO05D006009 1.1e-51 208.0 248 42.7
FAN18G3597 Fragaria x ananassa HOM05D005023 ORTHO05D006009 1.1e-51 208.0 248 42.7
PSO782G3892 Papaver somniferum HOM05D005023 ORTHO05D006009 1.1e-51 208.0 281 41.6
FAN08G0704 Fragaria x ananassa HOM05D005023 ORTHO05D006009 2.0e-51 207.2 248 42.7
GSVIVG01013101001 Vitis vinifera HOM05D005023 ORTHO05D006009 2.0e-51 207.2 247 45.3
PGR042G2438 Punica granatum HOM05D005023 ORTHO05D006009 2.6e-51 206.8 240 45.4
Duzib084G0965 Durio zibethinus HOM05D005023 ORTHO05D006009 3.3e-51 206.5 244 45.1
FAN13G2198 Fragaria x ananassa HOM05D005023 ORTHO05D006009 3.3e-51 206.5 248 42.7
FAN13G2978 Fragaria x ananassa HOM05D005023 ORTHO05D006009 3.3e-51 206.5 248 42.7
Atru.chr12.846 Acer truncatum HOM05D005023 ORTHO05D006009 5.7e-51 205.7 249 44.6
FAN18G4268 Fragaria x ananassa HOM05D005023 ORTHO05D006009 5.7e-51 205.7 248 42.3
Lj6g0028231 Lotus japonicus HOM05D005023 ORTHO05D006009 1.1e-49 201.4 246 43.9
Ca_22661_v3 Cicer arietinum L. HOM05D005023 ORTHO05D006009 1.8e-49 200.7 263 42.6
Glyma.06G013600 Glycine max HOM05D005023 ORTHO05D006009 2.4e-49 200.3 246 43.5
TPR.G14159 Trifolium pratense HOM05D005023 ORTHO05D006009 4.1e-49 199.5 252 44.8
Hund11209 Selenicereus undatus HOM05D005023 ORTHO05D006009 7.0e-49 198.7 252 43.7
Lalb_Chr25g0286701 Lupinus albus HOM05D005023 ORTHO05D006009 9.1e-49 198.4 245 43.3
Aa31sc182G50 Aethionema arabicum HOM05D005023 ORTHO05D006009 1.5e-48 197.6 247 47.0
unitig_21.g20893 Utricularia gibba HOM05D005023 ORTHO05D004745 1.5e-48 197.6 237 45.6
ECA240G3323 Erigeron canadensis HOM05D005023 ORTHO05D006009 2.0e-48 197.2 244 43.0
Sabra01G0107600 Salix brachista HOM05D005023 ORTHO05D006009 2.0e-48 197.2 262 45.0
Haze_08177 Corylus avellana HOM05D005023 ORTHO05D006009 3.5e-48 196.4 199 49.7
Psat4g122280 Pisum sativum HOM05D005023 ORTHO05D006009 1.0e-47 194.9 245 44.9
AL8G11450 Arabidopsis lyrata HOM05D005023 ORTHO05D006009 1.3e-47 194.5 252 46.4
Carub.0008s0106 Capsella rubella HOM05D005023 ORTHO05D006009 1.3e-47 194.5 285 42.8
Psat4g122680 Pisum sativum HOM05D005023 ORTHO05D006009 1.7e-47 194.1 224 45.1
Sp2g11650 Schrenkiella parvula HOM05D005023 ORTHO05D006009 1.7e-47 194.1 248 46.8
AT5G46850 Arabidopsis thaliana HOM05D005023 ORTHO05D006009 2.2e-47 193.7 249 45.4
Glyma.04G013700 Glycine max HOM05D005023 ORTHO05D006009 2.9e-47 193.4 267 41.6
Medtr8g066330 Medicago truncatula HOM05D005023 ORTHO05D006009 3.8e-47 193.0 254 42.9
Eucgr.E00250 Eucalyptus grandis HOM05D005023 ORTHO05D006009 8.5e-47 191.8 273 40.3
EL10Ac8g19220 Beta vulgaris HOM05D005023 ORTHO05D006009 1.4e-46 191.0 252 42.1
AUR62033976 Chenopodium quinoa HOM05D005023 ORTHO05D006009 1.4e-46 191.0 261 42.9
CARHR174600 Cardamine hirsuta HOM05D005023 ORTHO05D006009 2.5e-46 190.3 248 44.4
CANSAT54G0648 Cannabis sativa HOM05D005023 ORTHO05D006009 3.2e-46 189.9 255 40.8
ClCG04G001320 Citrullus lanatus HOM05D005023 ORTHO05D006009 3.2e-46 189.9 271 40.2
Gohir.A12G206900 Gossypium hirsutum HOM05D005023 ORTHO05D006009 1.2e-45 188.0 245 43.7
Sed0002054 Sechium edule HOM05D005023 ORTHO05D006009 1.2e-45 188.0 275 38.5
Thhalv10000976m.g Eutrema salsugineum HOM05D005023 ORTHO05D006009 1.6e-45 187.6 280 42.5
Sabra03G0064200 Salix brachista HOM05D005023 ORTHO05D006009 2.1e-45 187.2 216 46.3
FAN04G1126 Fragaria x ananassa HOM05D005023 ORTHO05D006009 3.6e-45 186.4 191 48.2
arahy.Tifrunner.gnm1.ann1.NK2KWA Arachis hypogaea HOM05D005023 ORTHO05D006009 4.7e-45 186.0 246 40.7
arahy.Tifrunner.gnm1.ann1.6CH5L4 Arachis hypogaea HOM05D005023 ORTHO05D006009 6.1e-45 185.7 246 40.7
CsaV3_1G033210 Cucumis sativus L. HOM05D000021 ORTHO05D000010 6.1e-45 185.7 296 37.5
Gohir.D12G209350 Gossypium hirsutum HOM05D005023 ORTHO05D006009 6.1e-45 185.7 276 39.9
Gorai.008G224900 Gossypium raimondii HOM05D005023 ORTHO05D006009 6.1e-45 185.7 245 43.3
THA.LOC104806696 Tarenaya hassleriana HOM05D005023 ORTHO05D006009 6.1e-45 185.7 244 44.7
HanXRQChr03g0083581 Helianthus annuus HOM05D005023 ORTHO05D006009 1.4e-44 184.5 238 39.5
arahy.Tifrunner.gnm1.ann1.J93PEP Arachis hypogaea HOM05D005023 ORTHO05D006009 2.3e-44 183.7 248 40.3
BraA06t27429Z Brassica rapa HOM05D005023 ORTHO05D006009 2.3e-44 183.7 270 42.6
A06p45570 Brassica napus HOM05D005023 ORTHO05D006009 5.2e-44 182.6 246 44.3
BcaC06g31439 Brassica carinata HOM05D005023 ORTHO05D006009 6.7e-44 182.2 242 43.4
MBI02_g28332_MAGBIO Magnolia biondii HOM05D005023 ORTHO05D006009 1.5e-43 181.0 247 40.5
BcaC06g34337 Brassica carinata HOM05D005023 ORTHO05D006009 9.7e-43 178.3 270 42.2
C07p30210 Brassica napus HOM05D005023 ORTHO05D006009 9.7e-43 178.3 270 42.2
BolC7t43557H Brassica oleracea HOM05D005023 ORTHO05D006009 9.7e-43 178.3 270 42.6
Ah.12g065340 Amaranthus hybridus HOM05D005023 ORTHO05D006009 1.3e-42 177.9 247 43.3
SHI20240 Sapria himalayana HOM05D000452 ORTHO05D000647 2.6e-40 170.2 247 42.1
PSO063G5178 Papaver somniferum HOM05D005023 ORTHO05D006009 5.9e-40 169.1 166 51.8
SalBow6G7173 Salvia bowleyana HOM05D005023 ORTHO05D006009 7.7e-40 168.7 81 97.5
Hma1.2p1_1594F.1_g292650 Hydrangea macrophylla HOM05D005023 ORTHO05D006009 6.5e-39 165.6 163 51.5
Nn7g38116 Nelumbo nucifera HOM05D005023 ORTHO05D006009 1.5e-38 164.5 244 36.5
TPR.G3350 Trifolium pratense HOM05D005023 ORTHO05D006009 1.6e-37 161.0 189 45.5
CDE02G4581 Ceratophyllum demersum HOM05D005023 ORTHO05D006009 8.0e-37 158.7 260 37.3
Sc01g0007280 Simmondsia chinensis HOM05D005023 ORTHO05D006009 5.2e-36 156.0 244 37.3
Hma1.2p1_2161F.1_g315630 Hydrangea macrophylla HOM05D005023 ORTHO05D006009 1.2e-35 154.8 182 45.1
ATR0580G166 Amborella trichopoda HOM05D005237 ORTHO05D006189 1.4e-33 147.9 193 42.0
arahy.Tifrunner.gnm1.ann1.GAHP45 Arachis hypogaea HOM05D005023 ORTHO05D006009 1.4e-33 147.9 242 35.5
Zm00001eb030880 Zea mays HOM05D005023 ORTHO05D006009 1.8e-33 147.5 216 41.7
MELO3C033076.2 Cucumis melo HOM05D005023 ORTHO05D006009 1.0e-31 141.7 235 36.2
Os12g0596900 Oryza sativa ssp. japonica HOM05D005023 ORTHO05D006009 1.0e-31 141.7 246 37.0
Solyc08g076550.3 Solanum lycopersicum HOM05D005023 ORTHO05D006009 1.3e-31 141.4 137 50.4
HPP92_014897 Vanilla planifolia HOM05D005023 ORTHO05D006009 1.1e-30 138.3 240 37.1
HPP92_014902 Vanilla planifolia HOM05D005023 ORTHO05D006009 1.1e-30 138.3 239 37.7
Actinidia09177 Actinidia chinensis HOM05D005023 ORTHO05D006009 5.2e-28 129.4 244 34.0
Hma1.2p1_0572F.1_g181170 Hydrangea macrophylla HOM05D005023 ORTHO05D006009 1.4e-25 121.3 125 51.2
Mapoly0088s0063 Marchantia polymorpha HOM05D005023 ORTHO05D006009 2.1e-21 107.5 220 30.9
SalBow6G3463 Salvia bowleyana HOM05D005023 ORTHO05D006009 6.1e-21 105.9 57 87.7
SMO358G0075 Selaginella moellendorffii HOM05D005023 ORTHO05D006009 5.2e-20 102.8 197 31.0
TAR375G0008 Trochodendron aralioides HOM05D005023 ORTHO05D006009 8.3e-18 95.5 157 36.9
Pp3c13_7870 Physcomitrium patens HOM05D005023 ORTHO05D006009 5.4e-17 92.8 211 28.0
MELO3C011047.2 Cucumis melo HOM05D005023 ORTHO05D006009 7.0e-17 92.4 96 47.9
AagrBONN_evm.TU.Sc2ySwM_344.1294 Anthoceros agrestis HOM05D005023 ORTHO05D006009 3.4e-11 73.6 147 32.7
CSS0036970 Camellia sinensis var. sinensis HOM05D005023 ORTHO05D006009 6.0e-08 62.8 83 43.4


User provided reference genes

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