Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G3706 Salvia bowleyana HOM05D005503 ORTHO05D008949 1.1e-96 356.7 180 100.0
SalBow6G4155 Salvia bowleyana HOM05D005503 ORTHO05D008949 1.1e-96 356.7 180 100.0
Migut.J01714 Erythranthe guttata HOM05D005503 ORTHO05D008949 3.5e-39 165.6 182 53.3
SGA_v2.0_scaffold69G23127 Striga asiatica HOM05D005503 ORTHO05D008949 1.7e-30 136.7 174 48.3
unitig_22.g6053 Utricularia gibba HOM05D005503 ORTHO05D008949 1.0e-27 127.5 132 52.3
Aa31LG1G21320 Aethionema arabicum HOM05D005503 ORTHO05D008949 9.8e-18 94.4 95 55.8
Rhsim03G0032200 Rhododendron simsii HOM05D005503 ORTHO05D008949 1.7e-17 93.6 93 57.0
PGR004G2205 Punica granatum HOM05D005503 ORTHO05D008949 2.2e-17 93.2 115 47.0
Gohir.D09G116600 Gossypium hirsutum HOM05D005503 ORTHO05D008949 2.9e-17 92.8 124 44.4
Gorai.006G134900 Gossypium raimondii HOM05D005503 ORTHO05D008949 2.9e-17 92.8 124 44.4
Carub.0006s0293 Capsella rubella HOM05D005503 ORTHO05D008949 3.7e-17 92.4 67 67.2
AL6G13590 Arabidopsis lyrata HOM05D005503 ORTHO05D008949 4.9e-17 92.0 120 45.8
C09p72840 Brassica napus HOM05D005503 ORTHO05D008949 4.9e-17 92.0 89 55.1
BolC9t60020H Brassica oleracea HOM05D005503 ORTHO05D008949 4.9e-17 92.0 85 56.5
Gohir.A09G120500 Gossypium hirsutum HOM05D005503 ORTHO05D008949 4.9e-17 92.0 124 44.4
Aqoxy2G00233 Aquilegia oxysepala HOM05D005503 ORTHO05D008949 6.4e-17 91.7 63 71.4
CARHR209280 Cardamine hirsuta HOM05D005503 ORTHO05D008949 6.4e-17 91.7 70 62.9
Lsat_1_v5_gn_9_32141 Lactuca sativa HOM05D005503 ORTHO05D008949 6.4e-17 91.7 85 58.8
ATR0721G098 Amborella trichopoda HOM05D005503 ORTHO05D008949 8.3e-17 91.3 80 61.2
DCAR_013615 Daucus carota HOM05D005503 ORTHO05D008949 8.3e-17 91.3 69 65.2
MD12G1083400 Malus domestica HOM05D005503 ORTHO05D008949 8.3e-17 91.3 70 65.7
A10p32120 Brassica napus HOM05D005503 ORTHO05D008949 1.4e-16 90.5 70 64.3
BraA10t45255Z Brassica rapa HOM05D005503 ORTHO05D008949 1.4e-16 90.5 70 64.3
CSS0039750 Camellia sinensis var. sinensis HOM05D005503 ORTHO05D008949 1.4e-16 90.5 65 70.8
Thhalv10016002m.g Eutrema salsugineum HOM05D005503 ORTHO05D008949 1.4e-16 90.5 70 64.3
Oeu033023.1 Olea europaea HOM05D005503 ORTHO05D008949 1.4e-16 90.5 67 67.2
Psat3g074800 Pisum sativum HOM05D005503 ORTHO05D008949 1.4e-16 90.5 114 47.4
Sp6g38760 Schrenkiella parvula HOM05D005503 ORTHO05D008949 1.4e-16 90.5 78 60.3
TPR.G7098 Trifolium pratense HOM05D005503 ORTHO05D008949 1.4e-16 90.5 83 59.0
COL.COLO4_36524 Corchorus olitorius HOM05D005503 ORTHO05D008949 1.8e-16 90.1 68 64.7
Glyma.03G133400 Glycine max HOM05D005503 ORTHO05D008949 1.8e-16 90.1 84 57.1
Glyma.19G135200 Glycine max HOM05D005503 ORTHO05D008949 1.8e-16 90.1 84 57.1
Dinv39668 Davidia involucrata HOM05D005503 ORTHO05D008949 2.4e-16 89.7 110 51.8
Phvul.001G128900 Phaseolus vulgaris HOM05D005503 ORTHO05D008949 2.4e-16 89.7 83 57.8
RcHm_v2.0_Chr3g0483941 Rosa chinensis HOM05D005503 ORTHO05D008949 2.4e-16 89.7 113 49.6
vmacro21945 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 2.4e-16 89.7 127 44.9
CiPaw.10G036000 Carya illinoinensis HOM05D005503 ORTHO05D008949 3.2e-16 89.4 81 60.5
ECA247G0412 Erigeron canadensis HOM05D005503 ORTHO05D008949 3.2e-16 89.4 112 47.3
FvH4_6g24610 Fragaria vesca HOM05D005503 ORTHO05D008949 3.2e-16 89.4 66 68.2
FAN02G3508 Fragaria x ananassa HOM05D005503 ORTHO05D008949 3.2e-16 89.4 66 68.2
FAN14G5504 Fragaria x ananassa HOM05D005503 ORTHO05D008949 3.2e-16 89.4 66 68.2
Lalb_Chr20g0115621 Lupinus albus HOM05D005503 ORTHO05D008949 3.2e-16 89.4 93 54.8
VMungo1383G2568 Vigna mungo HOM05D005503 ORTHO05D008949 3.2e-16 89.4 100 52.0
Medtr7g090930 Medicago truncatula HOM05D005503 ORTHO05D008949 4.1e-16 89.0 82 59.8
Nn2g15105 Nelumbo nucifera HOM05D005503 ORTHO05D008949 4.1e-16 89.0 100 52.0
Actinidia39197 Actinidia chinensis HOM05D005503 ORTHO05D008949 5.4e-16 88.6 84 57.1
TWI77G0247 Tripterygium wilfordii HOM05D005503 ORTHO05D008949 5.4e-16 88.6 64 65.6
BcaC06g32102 Brassica carinata HOM05D005503 ORTHO05D008949 7.0e-16 88.2 93 52.7
Hma1.2p1_0110F.1_g052960 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 7.0e-16 88.2 60 73.3
Lalb_Chr20g0110371 Lupinus albus HOM05D005503 ORTHO05D008949 9.2e-16 87.8 93 53.8
Duzib093G0766 Durio zibethinus HOM05D005503 ORTHO05D008949 1.2e-15 87.4 143 40.6
Lj1g0008024 Lotus japonicus HOM05D005503 ORTHO05D008949 1.2e-15 87.4 110 50.0
FAN05G5816 Fragaria x ananassa HOM05D005503 ORTHO05D008949 1.6e-15 87.0 66 66.7
GSVIVG01005042001 Vitis vinifera HOM05D005503 ORTHO05D008949 1.6e-15 87.0 83 59.0
AT5G04000 Arabidopsis thaliana HOM05D005503 ORTHO05D008949 2.0e-15 86.7 66 63.6
ClCG10G015610 Citrullus lanatus HOM05D005503 ORTHO05D008949 2.0e-15 86.7 64 67.2
Oeu006918.1 Olea europaea HOM05D005503 ORTHO05D008949 2.0e-15 86.7 67 64.2
Potri.006G047800 Populus trichocarpa HOM05D005503 ORTHO05D008949 2.0e-15 86.7 63 66.7
Prupe.7G052400 Prunus persica HOM05D005503 ORTHO05D008949 2.0e-15 86.7 67 64.2
Cpa.g.sc1079.1 Carica papaya HOM05D005503 ORTHO05D008949 2.7e-15 86.3 63 65.1
Cc06_g18190 Coffea canephora HOM05D005503 ORTHO05D008949 2.7e-15 86.3 66 62.1
Manes.09G011000 Manihot esculenta HOM05D005503 ORTHO05D008949 2.7e-15 86.3 81 58.0
Atru.chr1.1203 Acer truncatum HOM05D005503 ORTHO05D008949 3.5e-15 85.9 86 55.8
arahy.Tifrunner.gnm1.ann1.Z9GIA8 Arachis hypogaea HOM05D005503 ORTHO05D008949 3.5e-15 85.9 128 46.1
Ca_22958_v3 Cicer arietinum L. HOM05D005503 ORTHO05D008949 3.5e-15 85.9 66 65.2
CsaV3_3G040800 Cucumis sativus L. HOM05D005503 ORTHO05D008949 3.5e-15 85.9 90 53.3
DCAR_020514 Daucus carota HOM05D005503 ORTHO05D008949 3.5e-15 85.9 113 48.7
Thecc.05G146600 Theobroma cacao HOM05D005503 ORTHO05D008949 4.6e-15 85.5 67 61.2
MELO3C009814.2 Cucumis melo HOM05D005503 ORTHO05D008949 5.9e-15 85.1 88 53.4
THA.LOC104816402 Tarenaya hassleriana HOM05D005503 ORTHO05D008949 5.9e-15 85.1 64 65.6
Ciclev10006881m.g Citrus clementina HOM05D005503 ORTHO05D008949 7.8e-15 84.7 67 59.7
QL07p004035 Quercus lobata HOM05D005503 ORTHO05D008949 7.8e-15 84.7 82 56.1
Ah.13g077080 Amaranthus hybridus HOM05D005503 ORTHO05D008949 1.0e-14 84.3 61 67.2
CANSAT80G2315 Cannabis sativa HOM05D005503 ORTHO05D008949 1.0e-14 84.3 95 51.6
HanXRQChr10g0298211 Helianthus annuus HOM05D005503 ORTHO05D008949 1.0e-14 84.3 79 59.5
arahy.Tifrunner.gnm1.ann1.BJA8E7 Arachis hypogaea HOM05D005503 ORTHO05D008949 1.7e-14 83.6 100 50.0
FAN09G2222 Fragaria x ananassa HOM05D005503 ORTHO05D008949 1.7e-14 83.6 66 65.2
TAR636G0173 Trochodendron aralioides HOM05D005503 ORTHO05D008949 1.7e-14 83.6 66 63.6
Sabra06G0033300 Salix brachista HOM05D005503 ORTHO05D008949 2.3e-14 83.2 63 65.1
HPP92_027974 Vanilla planifolia HOM05D005503 ORTHO05D008949 2.3e-14 83.2 66 60.6
MBI13_g26145_MAGBIO Magnolia biondii HOM05D005503 ORTHO05D008949 3.0e-14 82.8 174 35.1
Sed0013086 Sechium edule HOM05D005503 ORTHO05D008949 3.0e-14 82.8 84 53.6
Eucgr.A02305 Eucalyptus grandis HOM05D005503 ORTHO05D008949 6.6e-14 81.6 66 62.1
Hund24647 Selenicereus undatus HOM05D005503 ORTHO05D008949 6.6e-14 81.6 60 65.0
Haze_19781 Corylus avellana HOM05D005503 ORTHO05D008949 8.6e-14 81.3 66 63.6
AUR62024521 Chenopodium quinoa HOM05D005503 ORTHO05D008949 1.5e-13 80.5 60 63.3
Peaxi162Scf00130g00911 Petunia axillaris HOM05D005503 ORTHO05D008949 1.5e-13 80.5 89 48.3
Zm00001eb291660 Zea mays HOM05D005503 ORTHO05D008949 1.5e-13 80.5 83 51.8
EL10Ac3g07150 Beta vulgaris HOM05D005503 ORTHO05D008949 1.9e-13 80.1 60 61.7
Potri.016G044001 Populus trichocarpa HOM05D005503 ORTHO05D008949 1.9e-13 80.1 80 56.2
Os05g0496000 Oryza sativa ssp. japonica HOM05D005503 ORTHO05D008949 2.5e-13 79.7 71 56.3
Duzib128G0213 Durio zibethinus HOM05D005503 ORTHO05D008949 4.3e-13 79.0 67 55.2
PSO063G5603 Papaver somniferum HOM05D005503 ORTHO05D008949 5.6e-13 78.6 126 41.3
CDE09G0956 Ceratophyllum demersum HOM05D003424 ORTHO05D004025 7.3e-13 78.2 61 63.9
Sc13g0001540 Simmondsia chinensis HOM05D005503 ORTHO05D008949 2.8e-12 76.3 63 60.3
Solyc04g016420.3 Solanum lycopersicum HOM05D005503 ORTHO05D008949 4.7e-12 75.5 66 56.1
Sopen04g008520 Solanum pennellii HOM05D005503 ORTHO05D008949 4.7e-12 75.5 66 56.1
PGSC0003DMG400012701 Solanum tuberosum HOM05D005503 ORTHO05D008949 4.7e-12 75.5 66 56.1
Ah.04g151390 Amaranthus hybridus HOM05D005503 ORTHO05D008949 8.0e-12 74.7 59 62.7
CAN.G1237.11 Capsicum annuum HOM05D005503 ORTHO05D008949 1.1e-11 74.3 113 39.8
Dinv18679 Davidia involucrata HOM05D005503 ORTHO05D008949 1.4e-11 73.9 66 57.6
Nitab4.5_0001618g0220 Nicotiana tabacum HOM05D005503 ORTHO05D008949 1.4e-11 73.9 86 47.7
Nitab4.5_0000826g0100 Nicotiana tabacum HOM05D005503 ORTHO05D008949 6.8e-11 71.6 86 46.5
HPP92_018218 Vanilla planifolia HOM05D005503 ORTHO05D008949 1.3e-09 67.4 63 52.4
Mapoly0048s0063 Marchantia polymorpha HOM05D005503 ORTHO05D008949 4.9e-09 65.5 55 54.5
vmacro21963 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 2.0e-07 60.1 55 60.0
Hma1.2p1_0005F.1_g004410 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 5.0e-06 55.5 68 48.5


User provided reference genes

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