Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G4122 Salvia bowleyana HOM05D005019 ORTHO05D006625 4.2e-298 1027.3 542 100.0
SalBow3G3235 Salvia bowleyana HOM05D005019 ORTHO05D006625 3.6e-273 944.5 557 91.0
Migut.N02183 Erythranthe guttata HOM05D005019 ORTHO05D006625 7.6e-223 777.3 552 73.6
MSTRG.12540 Avicennia marina HOM05D005019 ORTHO05D006625 1.7e-222 776.2 554 72.0
Lj1P543T22 Lonicera japonica HOM05D005019 ORTHO05D006625 1.3e-214 750.0 490 75.5
Dinv22477 Davidia involucrata HOM05D005019 ORTHO05D006625 3.2e-213 745.3 545 70.1
Actinidia21157 Actinidia chinensis HOM05D005019 ORTHO05D006625 1.6e-212 743.0 545 70.8
Dinv34572 Davidia involucrata HOM05D005019 ORTHO05D006625 2.7e-212 742.3 504 73.8
Lj1C59T1 Lonicera japonica HOM05D005019 ORTHO05D006625 1.3e-211 740.0 541 71.0
GSVIVG01000726001 Vitis vinifera HOM05D005019 ORTHO05D006625 1.3e-209 733.4 529 70.7
Cfa002330 Carpinus fangiana HOM05D005019 ORTHO05D006625 1.6e-209 733.0 543 69.2
Cc02_g22310 Coffea canephora HOM05D005019 ORTHO05D006625 6.2e-209 731.1 533 68.7
SGA_v2.0_scaffold80G25914 Striga asiatica HOM05D005019 ORTHO05D006625 4.2e-205 718.4 511 72.8
arahy.Tifrunner.gnm1.ann1.TZR8AU Arachis hypogaea HOM05D005019 ORTHO05D006625 7.1e-205 717.6 498 72.1
Haze_24536 Corylus avellana HOM05D005019 ORTHO05D006625 9.3e-205 717.2 530 69.2
Potri.005G218600 Populus trichocarpa HOM05D005019 ORTHO05D006625 2.1e-204 716.1 545 67.9
Sc04g0003030 Simmondsia chinensis HOM05D005019 ORTHO05D006625 3.0e-203 712.2 501 70.1
Nitab4.5_0010414g0010 Nicotiana tabacum HOM05D005019 ORTHO05D006625 5.1e-203 711.4 505 72.5
Nitab4.5_0008299g0020 Nicotiana tabacum HOM05D005019 ORTHO05D006625 6.7e-203 711.1 505 72.1
Ca_00175_v3 Cicer arietinum L. HOM05D005019 ORTHO05D006625 2.5e-202 709.1 554 66.2
PGSC0003DMG400023686 Solanum tuberosum HOM05D005019 ORTHO05D006625 4.3e-202 708.4 513 70.8
CiPaw.03G257900 Carya illinoinensis HOM05D005019 ORTHO05D006625 5.6e-202 708.0 555 66.5
Prupe.8G231800 Prunus persica HOM05D005019 ORTHO05D006625 5.6e-202 708.0 539 68.1
Rhsim07G0080400 Rhododendron simsii HOM05D005019 ORTHO05D006625 7.4e-202 707.6 502 71.5
Prupe.5G054300 Prunus persica HOM05D005019 ORTHO05D006625 1.3e-201 706.8 539 67.3
Peaxi162Scf00045g00177 Petunia axillaris HOM05D005019 ORTHO05D006625 6.2e-201 704.5 502 71.1
Psat1g046760 Pisum sativum HOM05D005019 ORTHO05D006625 1.8e-200 703.0 557 65.9
Nitab4.5_0003006g0020 Nicotiana tabacum HOM05D005019 ORTHO05D006625 2.4e-200 702.6 505 71.7
PGR044G0331 Punica granatum HOM05D005019 ORTHO05D006625 2.4e-200 702.6 541 67.8
Nitab4.5_0001370g0040 Nicotiana tabacum HOM05D005019 ORTHO05D006625 4.0e-200 701.8 502 71.7
MELO3C020849.2 Cucumis melo HOM05D005019 ORTHO05D006625 5.3e-200 701.4 545 67.3
Sopen10g030790 Solanum pennellii HOM05D005019 ORTHO05D006625 2.0e-199 699.5 511 71.8
Sed0015889 Sechium edule HOM05D005019 ORTHO05D006625 3.4e-199 698.7 506 69.8
TWI31G0602 Tripterygium wilfordii HOM05D005019 ORTHO05D006625 4.5e-199 698.4 531 67.0
RcHm_v2.0_Chr6g0289431 Rosa chinensis HOM05D005019 ORTHO05D006625 7.6e-199 697.6 559 64.9
Psat1g214520 Pisum sativum HOM05D005019 ORTHO05D006625 1.3e-198 696.8 544 66.0
TAR633G0331 Trochodendron aralioides HOM05D005019 ORTHO05D006625 1.3e-198 696.8 541 66.2
ClCG02G012250 Citrullus lanatus HOM05D005019 ORTHO05D006625 2.2e-198 696.0 545 66.4
Thecc.01G159500 Theobroma cacao HOM05D005019 ORTHO05D006625 2.2e-198 696.0 508 70.3
Glyma.13G255400 Glycine max HOM05D005019 ORTHO05D006625 3.8e-198 695.3 543 65.9
FvH4_2g22480 Fragaria vesca HOM05D005019 ORTHO05D006625 1.1e-197 693.7 528 67.2
Lalb_Chr19g0134621 Lupinus albus HOM05D005019 ORTHO05D006625 1.1e-197 693.7 544 65.8
FvH4_5g20520 Fragaria vesca HOM05D005019 ORTHO05D006625 1.9e-197 693.0 516 68.6
Solyc10g080180.3 Solanum lycopersicum HOM05D005019 ORTHO05D006625 1.9e-197 693.0 502 70.7
FAN20G1740 Fragaria x ananassa HOM05D005019 ORTHO05D006625 2.5e-197 692.6 544 65.6
FAN24G1214 Fragaria x ananassa HOM05D005019 ORTHO05D006625 2.5e-197 692.6 528 67.0
Glyma.15G059400 Glycine max HOM05D005019 ORTHO05D006625 2.5e-197 692.6 545 65.3
Medtr2g009800 Medicago truncatula HOM05D005019 ORTHO05D006625 3.2e-197 692.2 557 65.2
ECA247G2036 Erigeron canadensis HOM05D005019 ORTHO05D006625 5.5e-197 691.4 499 68.7
Eucgr.K03309 Eucalyptus grandis HOM05D005019 ORTHO05D006625 7.1e-197 691.0 549 65.6
Oeu018172.1 Olea europaea HOM05D005019 ORTHO05D006625 7.1e-197 691.0 548 66.4
CsaV3_2G016400 Cucumis sativus L. HOM05D005019 ORTHO05D006625 9.3e-197 690.6 545 66.2
FAN27G0650 Fragaria x ananassa HOM05D005019 ORTHO05D006625 9.3e-197 690.6 547 65.4
Ciclev10019516m.g Citrus clementina HOM05D005019 ORTHO05D006625 2.1e-196 689.5 548 66.4
VMungo0540G2473 Vigna mungo HOM05D005019 ORTHO05D006625 3.5e-196 688.7 552 63.4
FAN18G2643 Fragaria x ananassa HOM05D005019 ORTHO05D006625 1.8e-195 686.4 546 65.4
Manes.16G024300 Manihot esculenta HOM05D005019 ORTHO05D006625 6.7e-195 684.5 543 65.4
MD10G1192400 Malus domestica HOM05D005019 ORTHO05D006625 8.7e-195 684.1 544 66.2
Lsat_1_v5_gn_9_9921 Lactuca sativa HOM05D005019 ORTHO05D006625 1.1e-194 683.7 502 70.3
TPR.G9511 Trifolium pratense HOM05D005019 ORTHO05D006625 1.9e-194 682.9 546 65.0
Duzib147G1145 Durio zibethinus HOM05D005019 ORTHO05D006625 2.5e-194 682.6 505 69.3
HanXRQChr14g0454081 Helianthus annuus HOM05D005019 ORTHO05D006625 4.3e-194 681.8 496 68.5
Sabra05G0167700 Salix brachista HOM05D005019 ORTHO05D006625 7.4e-194 681.0 533 66.6
DCAR_002684 Daucus carota HOM05D005019 ORTHO05D006625 9.6e-194 680.6 554 63.5
FAN15G0975 Fragaria x ananassa HOM05D005019 ORTHO05D006625 9.6e-194 680.6 528 66.5
FAN04G2884 Fragaria x ananassa HOM05D005019 ORTHO05D006625 1.6e-193 679.9 516 67.4
Phvul.006G200700 Phaseolus vulgaris HOM05D005019 ORTHO05D006625 2.1e-193 679.5 555 63.6
MD05G1205400 Malus domestica HOM05D005019 ORTHO05D006625 2.8e-193 679.1 545 65.9
Medtr2g101620 Medicago truncatula HOM05D005019 ORTHO05D006625 3.7e-193 678.7 542 64.2
Lalb_Chr03g0030271 Lupinus albus HOM05D005019 ORTHO05D006625 4.8e-193 678.3 545 64.2
CANSAT35G0193 Cannabis sativa HOM05D005019 ORTHO05D006625 6.3e-193 677.9 557 65.2
Gohir.D11G348100 Gossypium hirsutum HOM05D005019 ORTHO05D006625 8.2e-193 677.6 506 68.6
Gorai.007G378500 Gossypium raimondii HOM05D005019 ORTHO05D006625 1.4e-192 676.8 506 68.4
EL10Ac5g11096 Beta vulgaris HOM05D005019 ORTHO05D006625 4.1e-192 675.2 544 63.4
Gohir.D04G014300 Gossypium hirsutum HOM05D005019 ORTHO05D006625 5.3e-192 674.9 507 68.0
Gorai.012G016900 Gossypium raimondii HOM05D005019 ORTHO05D006625 6.9e-192 674.5 507 68.2
Ah.02g113910 Amaranthus hybridus HOM05D005019 ORTHO05D006625 1.5e-191 673.3 550 62.7
Gohir.A11G329100 Gossypium hirsutum HOM05D005019 ORTHO05D006625 1.3e-190 670.2 506 68.0
Nn7g37931 Nelumbo nucifera HOM05D005019 ORTHO05D006625 8.4e-190 667.5 534 64.6
ClCG07G000610 Citrullus lanatus HOM05D005019 ORTHO05D006625 1.9e-189 666.4 532 65.8
Lsat_1_v5_gn_8_3120 Lactuca sativa HOM05D005019 ORTHO05D006625 4.2e-189 665.2 531 65.9
GSVIVG01003806001 Vitis vinifera HOM05D005019 ORTHO05D006625 9.3e-189 664.1 532 65.6
AUR62008493 Chenopodium quinoa HOM05D005019 ORTHO05D006625 2.1e-188 662.9 535 62.8
Lj1g0019097 Lotus japonicus HOM05D005019 ORTHO05D006625 2.1e-188 662.9 545 63.7
Hund02608 Selenicereus undatus HOM05D005019 ORTHO05D006625 1.8e-187 659.8 539 63.3
Cpa.g.sc200.5 Carica papaya HOM05D005019 ORTHO05D006625 3.9e-187 658.7 503 66.6
AUR62037688 Chenopodium quinoa HOM05D005019 ORTHO05D006625 6.7e-187 657.9 537 63.1
Atru.chr5.1578 Acer truncatum HOM05D005019 ORTHO05D006625 4.3e-186 655.2 552 62.1
Carub.0006s1224 Capsella rubella HOM05D005019 ORTHO05D006625 3.7e-185 652.1 549 62.7
CSS0021329 Camellia sinensis var. sinensis HOM05D005019 ORTHO05D006625 1.8e-184 649.8 545 65.3
THA.LOC104806394 Tarenaya hassleriana HOM05D005019 ORTHO05D006625 2.4e-184 649.4 500 65.6
PSO210G5187 Papaver somniferum HOM05D005019 ORTHO05D006625 2.6e-183 646.0 541 61.2
AT5G14050 Arabidopsis thaliana HOM05D005019 ORTHO05D006625 3.4e-183 645.6 547 62.7
PSO210G0391 Papaver somniferum HOM05D005019 ORTHO05D006625 4.5e-183 645.2 541 60.8
Aa31LG11G14850 Aethionema arabicum HOM05D005019 ORTHO05D006625 1.3e-182 643.7 544 64.2
AL6G24710 Arabidopsis lyrata HOM05D005019 ORTHO05D006625 1.1e-181 640.6 543 62.8
vmacro14869 Vaccinium macrocarpon HOM05D005019 ORTHO05D006625 3.2e-181 639.0 535 64.1
Thhalv10013183m.g Eutrema salsugineum HOM05D005019 ORTHO05D006625 7.2e-181 637.9 545 62.8
CARHR199310 Cardamine hirsuta HOM05D005019 ORTHO05D006625 4.6e-180 635.2 543 62.2
Sp6g29950 Schrenkiella parvula HOM05D005019 ORTHO05D006625 7.9e-180 634.4 530 63.8
Gohir.A05G401500 Gossypium hirsutum HOM05D005019 ORTHO05D006625 3.9e-179 632.1 507 65.3
AUR62021601 Chenopodium quinoa HOM05D005019 ORTHO05D006625 8.8e-179 630.9 436 69.7
unitig_8.g4702 Utricularia gibba HOM05D005019 ORTHO05D006625 2.2e-177 626.3 547 59.4
RcHm_v2.0_Chr7g0205871 Rosa chinensis HOM05D005019 ORTHO05D006625 6.3e-177 624.8 429 72.5
Aqoxy5G00344 Aquilegia oxysepala HOM05D005019 ORTHO05D006625 4.5e-175 618.6 501 62.9
MBI12_g17287_MAGBIO Magnolia biondii HOM05D005019 ORTHO05D006625 7.7e-175 617.8 544 60.7
AUR62025557 Chenopodium quinoa HOM05D005019 ORTHO05D006625 1.3e-174 617.1 522 60.9
Aqoxy6G01670 Aquilegia oxysepala HOM05D005019 ORTHO05D006625 4.2e-173 612.1 560 58.0
Lj6g0023367 Lotus japonicus HOM05D005019 ORTHO05D006625 9.4e-173 610.9 544 60.1
HPP92_026109 Vanilla planifolia HOM05D005019 ORTHO05D006625 1.2e-172 610.5 557 58.0
ATR0564G197 Amborella trichopoda HOM05D005019 ORTHO05D006625 2.1e-172 609.8 552 56.3
Os07g0603200 Oryza sativa ssp. japonica HOM05D005019 ORTHO05D006625 3.0e-171 605.9 495 61.4
Zm00001eb227850 Zea mays HOM05D005019 ORTHO05D006625 7.4e-170 601.3 495 60.6
Thecc.05G016300 Theobroma cacao HOM05D005019 ORTHO05D006625 1.1e-162 577.4 423 69.0
SHI13722 Sapria himalayana HOM05D005019 ORTHO05D006625 2.2e-161 573.2 504 58.1
Hma1.2p1_1029F.1_g249600 Hydrangea macrophylla HOM05D005019 ORTHO05D006625 1.7e-158 563.5 342 79.2
CDE04G3201 Ceratophyllum demersum HOM05D005019 ORTHO05D006625 5.4e-152 542.0 425 62.6
SEGI_19346 Sequoiadendron giganteum HOM05D005019 ORTHO05D006625 8.0e-148 528.1 544 52.0
HPP92_022900 Vanilla planifolia HOM05D005019 ORTHO05D006625 5.2e-147 525.4 382 66.5
Ciclev10006829m.g Citrus clementina HOM05D005019 ORTHO05D006625 1.6e-143 513.8 500 58.6
Mapoly0051s0055 Marchantia polymorpha HOM05D005019 ORTHO05D006625 1.3e-134 484.2 453 53.2
AagrBONN_evm.TU.Sc2ySwM_362.2571 Anthoceros agrestis HOM05D005019 ORTHO05D006625 1.2e-132 477.6 449 53.0
CDE02G2819 Ceratophyllum demersum HOM05D005019 ORTHO05D006625 4.3e-125 452.6 402 58.2
SMO356G0724 Selaginella moellendorffii HOM05D005019 ORTHO05D006625 7.1e-120 435.3 445 50.3
CBR_g21842 Chara braunii HOM05D005019 ORTHO05D006625 5.6e-117 425.6 545 41.8
Rhsim01G0269300 Rhododendron simsii HOM05D005019 ORTHO05D006625 2.8e-116 423.3 258 77.9
QL02p075842 Quercus lobata HOM05D005019 ORTHO05D006625 3.5e-111 406.4 539 46.6
Actinidia24938 Actinidia chinensis HOM05D005019 ORTHO05D006625 1.3e-110 404.4 452 53.1
Pp3c26_4890 Physcomitrium patens HOM05D005019 ORTHO05D006625 2.0e-106 390.6 444 45.0
AUR62008687 Chenopodium quinoa HOM05D005019 ORTHO05D006625 5.6e-101 372.5 455 47.9
CSS0011909 Camellia sinensis var. sinensis HOM05D005019 ORTHO05D006625 1.6e-95 354.4 502 44.8
MBI17_g40264_MAGBIO Magnolia biondii HOM05D005019 ORTHO05D006625 5.3e-91 339.3 289 63.0
Cre06.g255950 Chlamydomonas reinhardtii HOM05D005019 ORTHO05D006625 3.2e-88 330.1 469 38.8
AagrBONN_evm.TU.Sc2ySwM_228.5554 Anthoceros agrestis HOM05D005019 ORTHO05D006625 7.4e-85 318.9 307 51.1
MBI17_g13392_MAGBIO Magnolia biondii HOM05D005019 ORTHO05D012924 2.9e-73 280.4 368 45.9
MCO01G264 Micromonas commoda HOM05D005019 ORTHO05D006625 1.0e-70 271.9 455 36.0
PRCOL_00000196 Prasinoderma coloniale HOM05D005019 ORTHO05D006625 2.2e-65 254.2 326 40.2
BcaNung06034 Brassica carinata HOM05D005019 ORTHO05D006625 4.4e-61 240.0 235 57.9
TAR383G0651 Trochodendron aralioides HOM05D005019 ORTHO05D006625 3.3e-53 213.8 540 32.8
BcaB01g06348 Brassica carinata HOM05D005019 ORTHO05D006625 3.0e-38 164.1 242 43.0
Cfa024923 Carpinus fangiana HOM05D005019 ORTHO05D126389 1.9e-32 144.8 541 23.5
MD05G1205300 Malus domestica HOM05D005019 ORTHO05D048639 4.4e-29 133.7 154 53.2
QL02p076237 Quercus lobata HOM05D005019 ORTHO05D006625 5.6e-16 90.1 92 57.6
Zm00001eb227870 Zea mays HOM05D005019 ORTHO05D048639 2.3e-09 68.2 80 48.8


User provided reference genes

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