Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G4116 Salvia bowleyana HOM05D006111 ORTHO05D007683 1.5e-220 769.2 382 100.0
SalBow6G6970 Salvia bowleyana HOM05D006111 ORTHO05D007683 4.2e-220 767.7 382 99.7
Migut.N01606 Erythranthe guttata HOM05D006111 ORTHO05D007683 2.1e-179 632.5 384 82.3
SGA_v2.0_scaffold24G10670 Striga asiatica HOM05D006111 ORTHO05D007683 3.3e-172 608.6 385 80.8
Oeu014586.1 Olea europaea HOM05D006111 ORTHO05D007683 1.2e-171 606.7 389 80.5
MSTRG.17026 Avicennia marina HOM05D006111 ORTHO05D007683 3.5e-166 588.6 386 78.8
Dinv43431 Davidia involucrata HOM05D006111 ORTHO05D007683 5.6e-164 581.3 394 75.9
Peaxi162Scf00818g00127 Petunia axillaris HOM05D006111 ORTHO05D007683 1.6e-163 579.7 402 75.4
FvH4_7g01190 Fragaria vesca HOM05D006111 ORTHO05D007683 5.3e-162 574.7 382 75.1
FAN06G2641 Fragaria x ananassa HOM05D006111 ORTHO05D007683 5.3e-162 574.7 382 75.1
MD02G1308600 Malus domestica HOM05D006111 ORTHO05D007683 5.3e-162 574.7 392 76.3
Duzib268G0420 Durio zibethinus HOM05D006111 ORTHO05D007683 6.9e-162 574.3 392 76.8
MD07G1013000 Malus domestica HOM05D006111 ORTHO05D007683 1.2e-161 573.5 391 76.0
FAN10G2658 Fragaria x ananassa HOM05D006111 ORTHO05D007683 2.0e-161 572.8 383 74.9
FAN03G2464 Fragaria x ananassa HOM05D006111 ORTHO05D007683 2.6e-161 572.4 383 74.9
Gohir.D08G164600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 2.6e-161 572.4 394 74.4
CAN.G666.14 Capsicum annuum HOM05D006111 ORTHO05D007683 3.4e-161 572.0 392 74.0
Manes.10G140800 Manihot esculenta HOM05D006111 ORTHO05D007683 7.6e-161 570.9 383 75.7
Aqoxy1G00288 Aquilegia oxysepala HOM05D006111 ORTHO05D007683 9.9e-161 570.5 393 74.6
FAN01G0043 Fragaria x ananassa HOM05D006111 ORTHO05D007683 9.9e-161 570.5 383 74.7
EL10Ac2g04342 Beta vulgaris HOM05D006111 ORTHO05D007683 1.3e-160 570.1 398 72.4
QL04p008312 Quercus lobata HOM05D006111 ORTHO05D007683 1.3e-160 570.1 393 74.8
Gorai.004G171600 Gossypium raimondii HOM05D006111 ORTHO05D007683 1.7e-160 569.7 393 75.8
Atru.chr11.2607 Acer truncatum HOM05D006111 ORTHO05D007683 2.9e-160 568.9 390 76.2
RcHm_v2.0_Chr1g0316521 Rosa chinensis HOM05D006111 ORTHO05D007683 2.9e-160 568.9 384 74.7
Prupe.2G015400 Prunus persica HOM05D006111 ORTHO05D007683 3.8e-160 568.5 386 74.9
PGR044G0412 Punica granatum HOM05D006111 ORTHO05D007683 4.9e-160 568.2 394 74.1
CSS0012829 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 6.4e-160 567.8 389 74.3
CSS0034733 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 6.4e-160 567.8 389 74.3
Thecc.01G409400 Theobroma cacao HOM05D006111 ORTHO05D007683 8.4e-160 567.4 390 75.6
Ciclev10031806m.g Citrus clementina HOM05D006111 ORTHO05D007683 3.2e-159 565.5 388 73.7
Eucgr.J01211 Eucalyptus grandis HOM05D006111 ORTHO05D007683 9.3e-159 563.9 391 74.4
Cc01_g06700 Coffea canephora HOM05D006111 ORTHO05D007683 4.6e-158 561.6 391 74.7
Nn7g36241 Nelumbo nucifera HOM05D006111 ORTHO05D007683 2.3e-157 559.3 399 72.2
CiPaw.13G006200 Carya illinoinensis HOM05D006111 ORTHO05D007683 3.0e-157 558.9 384 74.2
Potri.009G059600 Populus trichocarpa HOM05D006111 ORTHO05D007683 3.0e-157 558.9 386 73.3
Hund21484 Selenicereus undatus HOM05D006111 ORTHO05D007683 3.9e-157 558.5 397 70.5
Ah.10g038770 Amaranthus hybridus HOM05D006111 ORTHO05D007683 5.1e-157 558.1 400 70.5
CsaV3_7G030960 Cucumis sativus L. HOM05D006111 ORTHO05D007683 5.1e-157 558.1 390 73.1
HanXRQChr09g0260521 Helianthus annuus HOM05D006111 ORTHO05D007683 6.6e-157 557.8 386 75.1
ClCG09G004060 Citrullus lanatus HOM05D006111 ORTHO05D007683 8.7e-157 557.4 390 73.8
Lalb_Chr01g0015831 Lupinus albus HOM05D006111 ORTHO05D007683 1.5e-156 556.6 383 73.6
TAR623G0061 Trochodendron aralioides HOM05D006111 ORTHO05D007683 3.3e-156 555.4 391 73.4
MBI02_g05669_MAGBIO Magnolia biondii HOM05D006111 ORTHO05D007683 4.3e-156 555.1 389 71.2
DCAR_015173 Daucus carota HOM05D006111 ORTHO05D007683 2.1e-155 552.7 388 72.2
Sopen02g001570 Solanum pennellii HOM05D006111 ORTHO05D007683 2.8e-155 552.4 310 83.9
GSVIVG01032129001 Vitis vinifera HOM05D006111 ORTHO05D007683 2.8e-155 552.4 299 88.3
PSO339G0604 Papaver somniferum HOM05D006111 ORTHO05D007683 4.8e-155 551.6 389 72.2
MELO3C023560.2 Cucumis melo HOM05D006111 ORTHO05D007683 8.1e-155 550.8 408 70.6
Nitab4.5_0001001g0030 Nicotiana tabacum HOM05D006111 ORTHO05D007683 1.1e-154 550.4 390 71.0
PSO384G4428 Papaver somniferum HOM05D006111 ORTHO05D007683 1.4e-154 550.1 389 72.5
Potri.009G059800 Populus trichocarpa HOM05D006111 ORTHO05D007683 1.4e-154 550.1 391 72.1
Solyc02g005200.4 Solanum lycopersicum HOM05D006111 ORTHO05D007683 1.4e-154 550.1 331 79.8
TWI09G1338 Tripterygium wilfordii HOM05D006111 ORTHO05D007683 1.8e-154 549.7 389 72.5
Sc10g0000130 Simmondsia chinensis HOM05D006111 ORTHO05D007683 3.1e-154 548.9 395 70.9
arahy.Tifrunner.gnm1.ann1.M31XXH Arachis hypogaea HOM05D006111 ORTHO05D007683 4.0e-154 548.5 388 72.4
arahy.Tifrunner.gnm1.ann1.YZE6TL Arachis hypogaea HOM05D006111 ORTHO05D007683 4.0e-154 548.5 388 72.4
THA.LOC104819080 Tarenaya hassleriana HOM05D006111 ORTHO05D007683 4.0e-154 548.5 385 72.7
COL.COLO4_04864 Corchorus olitorius HOM05D006111 ORTHO05D007683 5.3e-154 548.1 386 73.6
PGSC0003DMG400006635 Solanum tuberosum HOM05D006111 ORTHO05D007683 3.4e-153 545.4 369 73.7
CARHR082760 Cardamine hirsuta HOM05D006111 ORTHO05D007683 1.3e-152 543.5 389 72.0
Sed0027336 Sechium edule HOM05D006111 ORTHO05D007683 1.3e-152 543.5 390 72.3
Lsat_1_v5_gn_4_136121 Lactuca sativa HOM05D006111 ORTHO05D007683 3.8e-152 542.0 383 72.8
Carub.0003s0759 Capsella rubella HOM05D006111 ORTHO05D007683 4.9e-152 541.6 385 71.2
AL3G19390 Arabidopsis lyrata HOM05D006111 ORTHO05D007683 6.4e-152 541.2 385 71.2
Thhalv10020943m.g Eutrema salsugineum HOM05D006111 ORTHO05D007683 8.4e-152 540.8 391 70.6
Sp3g06920 Schrenkiella parvula HOM05D006111 ORTHO05D007683 1.1e-151 540.4 383 71.3
vmacro21191 Vaccinium macrocarpon HOM05D006111 ORTHO05D007683 3.2e-151 538.9 465 63.0
CANSAT80G0546 Cannabis sativa HOM05D006111 ORTHO05D007683 7.1e-151 537.7 385 69.1
AT3G08010 Arabidopsis thaliana HOM05D006111 ORTHO05D007683 6.0e-150 534.6 385 70.1
C03p43240 Brassica napus HOM05D006111 ORTHO05D007683 3.3e-148 528.9 383 70.0
Aa31LG5G18560 Aethionema arabicum HOM05D006111 ORTHO05D007683 5.6e-148 528.1 310 81.0
Sabra09G0044000 Salix brachista HOM05D006111 ORTHO05D007683 2.8e-147 525.8 433 64.9
Ca_14461_v3 Cicer arietinum L. HOM05D006111 ORTHO05D007683 6.2e-147 524.6 386 68.7
unitig_749.g14328 Utricularia gibba HOM05D006111 ORTHO05D007683 8.1e-147 524.2 369 70.2
Lj3g0026579 Lotus japonicus HOM05D006111 ORTHO05D007683 1.2e-145 520.4 386 67.4
Medtr3g030950 Medicago truncatula HOM05D006111 ORTHO05D007683 1.7e-144 516.5 383 68.1
Rhsim01G0128600 Rhododendron simsii HOM05D006111 ORTHO05D007683 8.4e-144 514.2 497 58.1
ATR0332G055 Amborella trichopoda HOM05D006111 ORTHO05D007683 3.2e-143 512.3 311 77.5
Lj5C169G9 Lonicera japonica HOM05D006111 ORTHO05D007683 3.2e-143 512.3 283 85.2
Cfa010790 Carpinus fangiana HOM05D006111 ORTHO05D007683 3.5e-142 508.8 385 68.8
Cpa.g.sc125.25 Carica papaya HOM05D006111 ORTHO05D007683 1.5e-140 503.4 425 62.4
Nitab4.5_0000139g0200 Nicotiana tabacum HOM05D006111 ORTHO05D007683 3.7e-139 498.8 392 66.3
Glyma.10G089700 Glycine max HOM05D006111 ORTHO05D007683 6.9e-138 494.6 383 66.3
Glyma.15G275900 Glycine max HOM05D006111 ORTHO05D007683 1.2e-137 493.8 384 65.9
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 4.5e-137 491.9 281 84.3
Phvul.005G024500 Phaseolus vulgaris HOM05D006111 ORTHO05D007683 1.0e-136 490.7 382 65.4
AUR62043480 Chenopodium quinoa HOM05D006111 ORTHO05D007683 8.4e-136 487.6 397 63.7
Psat5g208360 Pisum sativum HOM05D006111 ORTHO05D007683 2.5e-135 486.1 394 64.5
VMungo1080G1123 Vigna mungo HOM05D006111 ORTHO05D007683 2.1e-134 483.0 382 65.2
HPP92_009763 Vanilla planifolia HOM05D006111 ORTHO05D007683 3.9e-133 478.8 396 63.9
Psat3g069160 Pisum sativum HOM05D006111 ORTHO05D007683 1.9e-132 476.5 296 75.7
Os02g0610800 Oryza sativa ssp. japonica HOM05D006111 ORTHO05D007683 3.1e-130 469.2 304 71.4
AUR62009394 Chenopodium quinoa HOM05D006111 ORTHO05D007683 2.0e-129 466.5 398 61.3
AUR62023076 Chenopodium quinoa HOM05D006111 ORTHO05D007683 3.4e-129 465.7 397 61.2
CDE05G1285 Ceratophyllum demersum HOM05D006111 ORTHO05D007683 9.1e-122 441.0 356 64.9
Actinidia21546 Actinidia chinensis HOM05D006111 ORTHO05D007683 4.2e-111 405.6 389 59.4
BcaB03g11554 Brassica carinata HOM05D006111 ORTHO05D007683 2.6e-108 396.4 228 82.0
Haze_03183 Corylus avellana HOM05D006111 ORTHO05D007683 2.8e-107 392.9 326 64.4
Pp3c6_22710 Physcomitrium patens HOM05D006111 ORTHO05D007683 2.2e-104 383.3 330 56.4
Pp3c5_6760 Physcomitrium patens HOM05D006111 ORTHO05D007683 1.1e-103 380.9 348 54.9
Mapoly0153s0005 Marchantia polymorpha HOM05D006111 ORTHO05D007683 9.4e-103 377.9 293 58.7
A03p35610 Brassica napus HOM05D006111 ORTHO05D007683 5.2e-101 372.1 213 81.7
BolC3t16593H Brassica oleracea HOM05D006111 ORTHO05D007683 5.2e-101 372.1 213 81.7
BraA03t12736Z Brassica rapa HOM05D006111 ORTHO05D007683 5.2e-101 372.1 213 81.7
AagrBONN_evm.TU.Sc2ySwM_344.1799 Anthoceros agrestis HOM05D006111 ORTHO05D007683 5.0e-96 355.5 293 55.3
Medtr3g030975 Medicago truncatula HOM05D006111 ORTHO05D007683 4.2e-95 352.4 213 77.5
Zm00001eb246820 Zea mays HOM05D006111 ORTHO05D007683 2.1e-94 350.1 223 71.3
Gohir.A08G143600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 2.4e-90 336.7 260 69.2
Actinidia20661 Actinidia chinensis HOM05D006111 ORTHO05D007683 3.6e-86 322.8 291 60.1
SMO353G0296 Selaginella moellendorffii HOM05D006111 ORTHO05D007683 1.5e-84 317.4 290 51.4
TPR.G35304 Trifolium pratense HOM05D006111 ORTHO05D007683 2.8e-78 296.6 230 64.3
PRCOL_00003534 Prasinoderma coloniale HOM05D006111 ORTHO05D007683 6.4e-75 285.4 304 45.7
HPP92_009753 Vanilla planifolia HOM05D006111 ORTHO05D007683 1.9e-74 283.9 177 76.8
Cre17.g702500 Chlamydomonas reinhardtii HOM05D006111 ORTHO05D007683 8.6e-72 275.0 285 45.6
MCO10G268 Micromonas commoda HOM05D006111 ORTHO05D007683 2.6e-68 263.5 278 46.4
Prupe.2G016000 Prunus persica HOM05D006111 ORTHO05D007683 2.6e-68 263.5 157 81.5
QL04p008446 Quercus lobata HOM05D006111 ORTHO05D007683 5.8e-60 235.7 135 83.7
SEGI_32608 Sequoiadendron giganteum HOM05D006111 ORTHO05D007683 1.1e-39 168.3 108 69.4
A03p35600 Brassica napus HOM05D006111 ORTHO05D007683 1.9e-39 167.5 168 57.7
CBR_g5582 Chara braunii HOM05D006111 ORTHO05D007683 2.5e-39 167.2 161 49.1
HanXRQChr12g0362881 Helianthus annuus HOM05D006111 ORTHO05D007683 5.8e-36 156.0 108 69.4
CBR_g5588 Chara braunii HOM05D006111 ORTHO05D007683 2.5e-31 140.6 97 64.9
HPP92_009752 Vanilla planifolia HOM05D006111 ORTHO05D007683 1.0e-27 128.6 183 43.2
SEGI_00353 Sequoiadendron giganteum HOM05D006111 ORTHO05D007683 9.3e-26 122.1 100 60.0
Medtr8g104810 Medicago truncatula HOM05D006111 ORTHO05D007683 4.3e-23 113.2 66 77.3
C03p43260 Brassica napus HOM05D006111 ORTHO05D007683 1.2e-17 95.1 48 89.6
BolC3t16595H Brassica oleracea HOM05D006111 ORTHO05D007683 1.2e-17 95.1 48 89.6
TPR.G36152 Trifolium pratense HOM05D006111 ORTHO05D007683 5.0e-11 73.2 113 46.0
TAR628G1549 Trochodendron aralioides HOM05D006111 ORTHO05D414729 1.1e-07 62.0 41 70.7
Medtr5g055880 Medicago truncatula HOM05D007086 ORTHO05D008927 9.7e-07 58.9 43 62.8


User provided reference genes

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