Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G4078 Salvia bowleyana HOM05D007531 ORTHO05D009484 4.5e-50 201.1 109 100.0
Migut.L01591 Erythranthe guttata HOM05D007531 ORTHO05D009484 3.4e-29 131.7 110 66.4
MSTRG.19432 Avicennia marina HOM05D007531 ORTHO05D009484 6.3e-28 127.5 109 68.8
Oeu028116.1 Olea europaea HOM05D007531 ORTHO05D009484 1.6e-26 122.9 109 65.1
SGA_v2.0_scaffold296G47570 Striga asiatica HOM05D007531 ORTHO05D009484 2.1e-23 112.5 111 61.3
PGSC0003DMG400013576 Solanum tuberosum HOM05D007531 ORTHO05D009484 8.9e-22 107.1 107 57.9
unitig_578.g16405 Utricularia gibba HOM05D007531 ORTHO05D009484 1.5e-21 106.3 109 58.7
Sopen07g022090 Solanum pennellii HOM05D007531 ORTHO05D009484 2.8e-20 102.1 107 56.1
CAN.G660.22 Capsicum annuum HOM05D007531 ORTHO05D009484 4.9e-20 101.3 107 55.1
Solyc07g042450.3 Solanum lycopersicum HOM05D007531 ORTHO05D009484 8.3e-20 100.5 107 55.1
Nitab4.5_0001699g0060 Nicotiana tabacum HOM05D007531 ORTHO05D009484 2.4e-19 99.0 107 55.1
Nitab4.5_0001092g0060 Nicotiana tabacum HOM05D007531 ORTHO05D009484 4.1e-19 98.2 109 54.1
Dinv42427 Davidia involucrata HOM05D007531 ORTHO05D009484 5.4e-19 97.8 109 53.2
Nitab4.5_0007540g0040 Nicotiana tabacum HOM05D007531 ORTHO05D009484 5.4e-19 97.8 107 56.1
Peaxi162Scf00191g01018 Petunia axillaris HOM05D007531 ORTHO05D009484 2.7e-18 95.5 107 53.3
Sc14g0000480 Simmondsia chinensis HOM05D007531 ORTHO05D009484 7.8e-18 94.0 109 51.4
GSVIVG01015026001 Vitis vinifera HOM05D007531 ORTHO05D009484 1.3e-17 93.2 72 70.8
CSS0023587 Camellia sinensis var. sinensis HOM05D007531 ORTHO05D009484 2.3e-17 92.4 109 53.2
Thecc.09G071300 Theobroma cacao HOM05D007531 ORTHO05D009484 3.8e-17 91.7 72 66.7
Duzib168G1872 Durio zibethinus HOM05D007531 ORTHO05D009484 5.0e-17 91.3 109 49.5
CANSAT56G3767 Cannabis sativa HOM05D007531 ORTHO05D009484 6.6e-17 90.9 109 49.5
Duzib150G1567 Durio zibethinus HOM05D007531 ORTHO05D009484 6.6e-17 90.9 79 62.0
Rhsim05G0002900 Rhododendron simsii HOM05D007531 ORTHO05D009484 6.6e-17 90.9 57 70.2
DCAR_010491 Daucus carota HOM05D007531 ORTHO05D009484 1.5e-16 89.7 59 69.5
Actinidia39623 Actinidia chinensis HOM05D007531 ORTHO05D009484 3.3e-16 88.6 109 47.7
Cpa.g.sc82.75 Carica papaya HOM05D007531 ORTHO05D009484 4.3e-16 88.2 109 51.4
Carub.0001s1884 Capsella rubella HOM05D007531 ORTHO05D009484 7.3e-16 87.4 109 49.5
Aa31LG7G3950 Aethionema arabicum HOM05D007531 ORTHO05D009484 9.5e-16 87.0 112 49.1
Prupe.7G193100 Prunus persica HOM05D007531 ORTHO05D009484 1.2e-15 86.7 110 48.2
EL10Ac8g18992 Beta vulgaris HOM05D007531 ORTHO05D009484 6.1e-15 84.3 109 44.0
AL1G31820 Arabidopsis lyrata HOM05D007531 ORTHO05D009484 8.0e-15 84.0 109 49.5
Gohir.D08G267900 Gossypium hirsutum HOM05D007531 ORTHO05D009484 1.4e-14 83.2 76 55.3
Lsat_1_v5_gn_7_35440 Lactuca sativa HOM05D007531 ORTHO05D009484 1.8e-14 82.8 109 45.9
Potri.006G137401 Populus trichocarpa HOM05D007531 ORTHO05D009484 1.8e-14 82.8 72 56.9
ClCG11G000070 Citrullus lanatus HOM05D007531 ORTHO05D009484 2.3e-14 82.4 74 60.8
COL.COLO4_21218 Corchorus olitorius HOM05D007531 ORTHO05D009484 2.3e-14 82.4 111 46.8
Cc06_g12620 Coffea canephora HOM05D007531 ORTHO05D009484 3.0e-14 82.0 112 45.5
Aqoxy7G04136 Aquilegia oxysepala HOM05D007531 ORTHO05D009484 4.0e-14 81.6 109 45.9
Dinv25515 Davidia involucrata HOM05D007531 ORTHO05D009484 4.0e-14 81.6 79 57.0
Gorai.004G285500 Gossypium raimondii HOM05D007531 ORTHO05D009484 4.0e-14 81.6 109 45.0
MD15G1222700 Malus domestica HOM05D007531 ORTHO05D009484 4.0e-14 81.6 109 44.0
PGR042G0735 Punica granatum HOM05D007531 ORTHO05D009484 5.2e-14 81.3 112 48.2
Gohir.A08G246700 Gossypium hirsutum HOM05D007531 ORTHO05D009484 8.9e-14 80.5 109 46.8
TWI63G1700 Tripterygium wilfordii HOM05D007531 ORTHO05D009484 8.9e-14 80.5 109 45.9
Medtr4g124770 Medicago truncatula HOM05D007531 ORTHO05D009484 1.2e-13 80.1 62 64.5
THA.LOC104809045 Tarenaya hassleriana HOM05D007531 ORTHO05D009484 1.2e-13 80.1 109 49.5
Lj4g0024105 Lotus japonicus HOM05D007531 ORTHO05D009484 2.6e-13 79.0 66 65.2
Manes.16G092000 Manihot esculenta HOM05D007531 ORTHO05D009484 2.6e-13 79.0 72 56.9
CsaV3_5G027570 Cucumis sativus L. HOM05D007531 ORTHO05D009484 3.4e-13 78.6 72 59.7
Manes.03G043400 Manihot esculenta HOM05D007531 ORTHO05D009484 3.4e-13 78.6 109 46.8
TPR.G12718 Trifolium pratense HOM05D007531 ORTHO05D009484 3.4e-13 78.6 65 61.5
TAR626G0337 Trochodendron aralioides HOM05D007531 ORTHO05D009484 4.4e-13 78.2 74 55.4
Atru.chr7.1757 Acer truncatum HOM05D007531 ORTHO05D009484 5.8e-13 77.8 74 59.5
Thhalv10009175m.g Eutrema salsugineum HOM05D007531 ORTHO05D009484 5.8e-13 77.8 109 45.9
QL11p002692 Quercus lobata HOM05D007531 ORTHO05D009484 7.5e-13 77.4 76 60.5
Sabra06G0107500 Salix brachista HOM05D007531 ORTHO05D009484 7.5e-13 77.4 46 71.7
Sp1g17150 Schrenkiella parvula HOM05D007531 ORTHO05D009484 1.3e-12 76.6 109 45.0
AT1G19240 Arabidopsis thaliana HOM05D007531 ORTHO05D009484 1.7e-12 76.3 113 46.0
ECA246G1013 Erigeron canadensis HOM05D007531 ORTHO05D009484 1.7e-12 76.3 76 52.6
vmacro17085 Vaccinium macrocarpon HOM05D007531 ORTHO05D009484 2.2e-12 75.9 74 54.1
Ciclev10010006m.g Citrus clementina HOM05D007531 ORTHO05D009484 3.7e-12 75.1 111 44.1
FAN26G1659 Fragaria x ananassa HOM05D007531 ORTHO05D009484 3.7e-12 75.1 112 42.0
FAN26G1806 Fragaria x ananassa HOM05D007531 ORTHO05D009484 3.7e-12 75.1 112 42.0
CDE06G0851 Ceratophyllum demersum HOM05D007531 ORTHO05D009484 4.9e-12 74.7 73 53.4
FAN23G0531 Fragaria x ananassa HOM05D007531 ORTHO05D009484 4.9e-12 74.7 109 42.2
Eucgr.H05011 Eucalyptus grandis HOM05D007531 ORTHO05D009484 1.1e-11 73.6 114 42.1
BcaB07g31940 Brassica carinata HOM05D007531 ORTHO05D009484 1.9e-11 72.8 109 43.1
BcaC07g38992 Brassica carinata HOM05D007531 ORTHO05D009484 1.9e-11 72.8 109 43.1
FvH4_1g09260 Fragaria vesca HOM05D007531 ORTHO05D009484 2.4e-11 72.4 110 39.1
FAN19G1112 Fragaria x ananassa HOM05D007531 ORTHO05D009484 2.4e-11 72.4 110 39.1
RcHm_v2.0_Chr2g0095821 Rosa chinensis HOM05D007531 ORTHO05D009484 3.2e-11 72.0 109 44.0
CARHR019840 Cardamine hirsuta HOM05D007531 ORTHO05D009484 4.1e-11 71.6 117 43.6
Phvul.004G046500 Phaseolus vulgaris HOM05D007531 ORTHO05D009484 4.1e-11 71.6 54 61.1
Psat0s2373g0160 Pisum sativum HOM05D007531 ORTHO05D009484 5.4e-11 71.2 91 53.8
Hma1.2p1_0519F.1_g171380 Hydrangea macrophylla HOM05D007531 ORTHO05D009484 1.2e-10 70.1 109 41.3
HPP92_021129 Vanilla planifolia HOM05D007531 ORTHO05D009484 1.2e-10 70.1 57 50.9
C05p17640 Brassica napus HOM05D007531 ORTHO05D009484 1.6e-10 69.7 61 57.4
Cfa002948 Carpinus fangiana HOM05D007531 ORTHO05D009484 2.0e-10 69.3 116 47.4
MBI19_g38003_MAGBIO Magnolia biondii HOM05D007531 ORTHO05D009484 2.0e-10 69.3 72 52.8
BolC5t30467H Brassica oleracea HOM05D007531 ORTHO05D009484 3.5e-10 68.6 113 41.6
Sed0019513 Sechium edule HOM05D007531 ORTHO05D009484 4.6e-10 68.2 47 66.0
arahy.Tifrunner.gnm1.ann1.ETL5CI Arachis hypogaea HOM05D007531 ORTHO05D009484 1.0e-09 67.0 79 48.1
arahy.Tifrunner.gnm1.ann1.J82KAY Arachis hypogaea HOM05D007531 ORTHO05D009484 1.0e-09 67.0 79 48.1
VMungo1215G2546 Vigna mungo HOM05D007531 ORTHO05D009484 1.3e-09 66.6 42 69.0
Glyma.17G046400 Glycine max HOM05D007531 ORTHO05D009484 1.7e-09 66.2 46 65.2
Os01g0144700 Oryza sativa ssp. japonica HOM05D007531 ORTHO05D009484 1.7e-09 66.2 86 43.0
HPP92_021130 Vanilla planifolia HOM05D007531 ORTHO05D009484 1.7e-09 66.2 82 42.7
Glyma.13G113300 Glycine max HOM05D007531 ORTHO05D009484 3.9e-09 65.1 41 68.3
Phvul.003G128000 Phaseolus vulgaris HOM05D007531 ORTHO05D009484 8.6e-09 63.9 46 65.2
A06p15390 Brassica napus HOM05D007531 ORTHO05D009484 1.1e-08 63.5 109 38.5
BraA06t24652Z Brassica rapa HOM05D007531 ORTHO05D009484 1.1e-08 63.5 109 38.5
Lalb_Chr11g0074031 Lupinus albus HOM05D007531 ORTHO05D009484 1.1e-08 63.5 91 48.4
FAN28G0689 Fragaria x ananassa HOM05D007531 ORTHO05D009484 2.3e-06 55.8 109 33.9


User provided reference genes

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