Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G4034 Salvia bowleyana HOM05D001128 ORTHO05D000721 2.1e-192 675.6 361 100.0
SalBow6G5364 Salvia bowleyana HOM05D001128 ORTHO05D000721 1.4e-151 540.0 329 90.6
MSTRG.8291 Avicennia marina HOM05D001128 ORTHO05D000721 2.1e-75 287.0 390 48.5
MSTRG.27358 Avicennia marina HOM05D001128 ORTHO05D000721 3.6e-51 206.5 403 40.0
Migut.F01305 Erythranthe guttata HOM05D001128 ORTHO05D000721 1.7e-40 171.0 357 41.7
Dinv16282 Davidia involucrata HOM05D001128 ORTHO05D000721 3.2e-36 156.8 475 32.6
Nitab4.5_0000243g0040 Nicotiana tabacum HOM05D001128 ORTHO05D000721 1.6e-35 154.5 464 33.2
Dinv34448 Davidia involucrata HOM05D001128 ORTHO05D000721 3.6e-35 153.3 440 34.8
Migut.F00730 Erythranthe guttata HOM05D001128 ORTHO05D000721 3.0e-34 150.2 387 36.2
Actinidia02898 Actinidia chinensis HOM05D001128 ORTHO05D000721 1.4e-31 141.4 483 32.9
Nitab4.5_0002822g0050 Nicotiana tabacum HOM05D001128 ORTHO05D000721 1.8e-31 141.0 464 32.5
Potri.010G195800 Populus trichocarpa HOM05D001128 ORTHO05D000721 4.5e-30 136.3 473 31.7
Oeu035129.1 Olea europaea HOM05D001128 ORTHO05D000721 3.8e-29 133.3 326 36.5
FvH4_7g23630 Fragaria vesca HOM05D001128 ORTHO05D000721 2.5e-28 130.6 446 30.3
QL08p062120 Quercus lobata HOM05D001128 ORTHO05D000721 3.2e-28 130.2 475 31.4
Hma1.2p1_0026F.1_g016650 Hydrangea macrophylla HOM05D001128 ORTHO05D000721 4.2e-28 129.8 489 30.5
Rhsim03G0138400 Rhododendron simsii HOM05D001128 ORTHO05D000721 9.4e-28 128.6 452 31.2
RcHm_v2.0_Chr1g0368901 Rosa chinensis HOM05D001128 ORTHO05D000721 9.4e-28 128.6 465 30.1
Cpa.g.sc19.247 Carica papaya HOM05D001128 ORTHO05D000721 1.2e-27 128.3 468 29.7
Manes.07G123000 Manihot esculenta HOM05D001128 ORTHO05D000721 1.2e-27 128.3 479 30.3
Prupe.2G243200 Prunus persica HOM05D001128 ORTHO05D000721 4.7e-27 126.3 467 30.2
FAN03G2145 Fragaria x ananassa HOM05D001128 ORTHO05D000721 8.0e-27 125.6 448 29.9
CSS0030928 Camellia sinensis var. sinensis HOM05D001128 ORTHO05D000721 4.0e-26 123.2 455 29.5
FAN01G1897 Fragaria x ananassa HOM05D001128 ORTHO05D000721 1.5e-25 121.3 446 29.4
CANSAT56G3374 Cannabis sativa HOM05D001128 ORTHO05D000721 2.6e-25 120.6 493 28.4
vmacro07011 Vaccinium macrocarpon HOM05D001128 ORTHO05D000721 3.3e-25 120.2 451 31.7
TAR633G0212 Trochodendron aralioides HOM05D001128 ORTHO05D000721 5.7e-25 119.4 454 29.5
Cc02_g07190 Coffea canephora HOM05D001128 ORTHO05D000721 7.5e-25 119.0 463 28.5
Sabra10G0150300 Salix brachista HOM05D001128 ORTHO05D000721 1.3e-24 118.2 473 29.8
COL.COLO4_25581 Corchorus olitorius HOM05D001128 ORTHO05D000721 1.7e-24 117.9 469 29.0
Haze_17155 Corylus avellana HOM05D001128 ORTHO05D000721 1.7e-24 117.9 477 29.1
FAN10G3504 Fragaria x ananassa HOM05D001128 ORTHO05D000721 1.7e-24 117.9 446 30.0
CSS0013156 Camellia sinensis var. sinensis HOM05D001128 ORTHO05D000721 2.2e-24 117.5 462 30.3
Manes.10G020800 Manihot esculenta HOM05D001128 ORTHO05D000721 2.8e-24 117.1 478 29.7
Thecc.10G030500 Theobroma cacao HOM05D001128 ORTHO05D000721 3.7e-24 116.7 470 29.4
Duzib128G2050 Durio zibethinus HOM05D001128 ORTHO05D000721 4.8e-24 116.3 465 29.5
TAR623G0478 Trochodendron aralioides HOM05D001128 ORTHO05D000721 1.1e-23 115.2 470 28.9
Gohir.D04G065500 Gossypium hirsutum HOM05D001128 ORTHO05D000721 5.3e-23 112.8 428 30.6
Potri.008G062200 Populus trichocarpa HOM05D001128 ORTHO05D000721 2.0e-22 110.9 471 29.3
CSS0047983 Camellia sinensis var. sinensis HOM05D001128 ORTHO05D000721 7.7e-22 109.0 422 32.0
Psat2g036720 Pisum sativum HOM05D001128 ORTHO05D000721 7.7e-22 109.0 416 29.8
TWI09G0818 Tripterygium wilfordii HOM05D001128 ORTHO05D000721 1.3e-21 108.2 464 28.7
Gorai.012G073700 Gossypium raimondii HOM05D001128 ORTHO05D000721 1.7e-21 107.8 428 30.4
MD01G1142200 Malus domestica HOM05D001128 ORTHO05D000721 1.7e-21 107.8 466 28.1
Cfa001394 Carpinus fangiana HOM05D001128 ORTHO05D000721 2.2e-21 107.5 364 29.7
CiPaw.01G293700 Carya illinoinensis HOM05D001128 ORTHO05D000721 2.2e-21 107.5 465 27.5
Gohir.A05G346700 Gossypium hirsutum HOM05D001128 ORTHO05D000721 2.2e-21 107.5 428 30.1
Phvul.001G238700 Phaseolus vulgaris HOM05D001128 ORTHO05D000721 2.2e-21 107.5 439 27.8
Glyma.11G225400 Glycine max HOM05D001128 ORTHO05D000721 6.5e-21 105.9 419 27.9
PSO384G2375 Papaver somniferum HOM05D001128 ORTHO05D000721 6.5e-21 105.9 483 28.8
Sabra08G0045800 Salix brachista HOM05D001128 ORTHO05D000721 6.5e-21 105.9 373 30.8
Medtr5g081460 Medicago truncatula HOM05D001128 ORTHO05D000721 3.2e-20 103.6 409 29.1
Gohir.D10G238700 Gossypium hirsutum HOM05D001128 ORTHO05D000721 5.5e-20 102.8 453 28.9
PSO339G4622 Papaver somniferum HOM05D001128 ORTHO05D000721 5.5e-20 102.8 485 28.0
Gorai.011G274600 Gossypium raimondii HOM05D001128 ORTHO05D000721 1.6e-19 101.3 459 28.5
Lj6g0007644 Lotus japonicus HOM05D001128 ORTHO05D000721 1.6e-19 101.3 430 28.1
SalBow5G3624 Salvia bowleyana HOM05D001128 ORTHO05D000721 1.6e-19 101.3 238 36.1
TAR636G2726 Trochodendron aralioides HOM05D001128 ORTHO05D000721 2.1e-19 100.9 442 30.1
Ah.10g036830 Amaranthus hybridus HOM05D001128 ORTHO05D000721 4.7e-19 99.8 430 29.8
CiPaw.02G188400 Carya illinoinensis HOM05D001128 ORTHO05D000721 4.7e-19 99.8 468 28.2
Glyma.18G031800 Glycine max HOM05D001128 ORTHO05D000721 6.1e-19 99.4 422 27.5
Ca_05916_v3 Cicer arietinum L. HOM05D001128 ORTHO05D000721 1.0e-18 98.6 429 28.2
Lj1A945T19 Lonicera japonica HOM05D001128 ORTHO05D000721 1.0e-18 98.6 441 27.4
Lalb_Chr18g0052901 Lupinus albus HOM05D001128 ORTHO05D000721 1.4e-18 98.2 326 31.3
arahy.Tifrunner.gnm1.ann1.U326PE Arachis hypogaea HOM05D001128 ORTHO05D000721 2.3e-18 97.4 440 28.6
Ciclev10031729m.g Citrus clementina HOM05D001128 ORTHO05D000721 2.3e-18 97.4 457 29.1
FAN06G3577 Fragaria x ananassa HOM05D001128 ORTHO05D000721 2.3e-18 97.4 400 28.2
arahy.Tifrunner.gnm1.ann1.1NAQ44 Arachis hypogaea HOM05D001128 ORTHO05D000721 3.0e-18 97.1 446 28.0
Duzib106G0526 Durio zibethinus HOM05D001128 ORTHO05D000721 4.0e-18 96.7 464 26.9
Hma1.2p1_0039F.1_g024950 Hydrangea macrophylla HOM05D001128 ORTHO05D000721 4.0e-18 96.7 434 29.0
Glyma.02G252700 Glycine max HOM05D001128 ORTHO05D000721 6.8e-18 95.9 434 29.7
Nn2g13535 Nelumbo nucifera HOM05D001128 ORTHO05D000721 8.8e-18 95.5 447 28.0
vmacro20201 Vaccinium macrocarpon HOM05D001128 ORTHO05D000721 8.8e-18 95.5 437 29.3
FAN06G2816 Fragaria x ananassa HOM05D001128 ORTHO05D000721 1.2e-17 95.1 400 28.0
Nn2g11296 Nelumbo nucifera HOM05D001128 ORTHO05D000721 1.5e-17 94.7 478 27.4
MBI14_g02856_MAGBIO Magnolia biondii HOM05D001128 ORTHO05D000721 2.0e-17 94.4 474 30.0
Actinidia29161 Actinidia chinensis HOM05D001128 ORTHO05D000721 3.4e-17 93.6 466 27.0
Gohir.A10G226400 Gossypium hirsutum HOM05D001128 ORTHO05D000721 3.4e-17 93.6 459 28.1
Actinidia13814 Actinidia chinensis HOM05D001128 ORTHO05D000721 4.4e-17 93.2 467 27.4
Glyma.14G063900 Glycine max HOM05D001128 ORTHO05D000721 4.4e-17 93.2 350 30.3
VMungo0647G0267 Vigna mungo HOM05D001128 ORTHO05D000721 5.7e-17 92.8 433 28.4
Aqoxy1G00786 Aquilegia oxysepala HOM05D001128 ORTHO05D000721 7.5e-17 92.4 466 29.6
ClCG07G003770 Citrullus lanatus HOM05D001128 ORTHO05D000721 7.5e-17 92.4 432 28.9
AUR62022804 Chenopodium quinoa HOM05D001128 ORTHO05D000721 1.3e-16 91.7 425 28.5
EL10Ac2g04665 Beta vulgaris HOM05D001128 ORTHO05D000721 1.7e-16 91.3 436 28.9
MELO3C026566.2 Cucumis melo HOM05D001128 ORTHO05D000721 2.8e-16 90.5 430 27.9
CsaV3_5G008580 Cucumis sativus L. HOM05D001128 ORTHO05D000721 2.8e-16 90.5 430 28.1
Hund16030 Selenicereus undatus HOM05D001128 ORTHO05D000721 4.8e-16 89.7 365 29.6
unitig_748.g6991 Utricularia gibba HOM05D001128 ORTHO05D000721 4.8e-16 89.7 240 32.9
Lsat_1_v5_gn_2_116981 Lactuca sativa HOM05D001128 ORTHO05D000721 1.1e-15 88.6 415 27.2
Hma1.2p1_1521F.1_g288670 Hydrangea macrophylla HOM05D001128 ORTHO05D000721 1.8e-15 87.8 369 27.4
Oeu018987.1 Olea europaea HOM05D001128 ORTHO05D000721 1.8e-15 87.8 360 30.3
Lj3C959G13 Lonicera japonica HOM05D001128 ORTHO05D000721 3.1e-15 87.0 445 26.3
Cpa.g.sc56.66 Carica papaya HOM05D001128 ORTHO05D000721 5.4e-15 86.3 468 26.3
Ca_17132_v3 Cicer arietinum L. HOM05D001128 ORTHO05D000721 7.0e-15 85.9 391 28.6
arahy.Tifrunner.gnm1.ann1.EVQB8B Arachis hypogaea HOM05D001128 ORTHO05D000721 1.2e-14 85.1 360 28.1
Manes.09G099100 Manihot esculenta HOM05D001128 ORTHO05D000721 1.2e-14 85.1 472 27.3
Phvul.008G228300 Phaseolus vulgaris HOM05D001128 ORTHO05D000721 2.0e-14 84.3 428 28.3
Hma1.2p1_0671F.1_g200660 Hydrangea macrophylla HOM05D001128 ORTHO05D000721 4.5e-14 83.2 475 27.6
arahy.Tifrunner.gnm1.ann1.RKI1B6 Arachis hypogaea HOM05D001128 ORTHO05D000721 5.9e-14 82.8 360 27.5
CSS0004370 Camellia sinensis var. sinensis HOM05D001128 ORTHO05D000721 2.3e-13 80.9 441 25.9
LjContig00141g0001836 Lotus japonicus HOM05D001128 ORTHO05D000721 6.5e-13 79.3 344 28.2
THA.LOC104824295 Tarenaya hassleriana HOM05D001128 ORTHO05D000721 6.5e-13 79.3 360 28.3
Rhsim05G0200600 Rhododendron simsii HOM05D001128 ORTHO05D000721 8.6e-13 79.0 474 26.8
Thecc.05G027900 Theobroma cacao HOM05D001128 ORTHO05D000721 8.6e-13 79.0 348 27.9
Haze_20899 Corylus avellana HOM05D001128 ORTHO05D000721 1.1e-12 78.6 480 26.0
Lj1A946G35 Lonicera japonica HOM05D001128 ORTHO05D000721 1.5e-12 78.2 325 28.3
GSVIVG01034054001 Vitis vinifera HOM05D001128 ORTHO05D000721 2.5e-12 77.4 360 26.4
MSTRG.5621 Avicennia marina HOM05D001128 ORTHO05D000721 3.2e-12 77.0 442 25.3
TWI77G0372 Tripterygium wilfordii HOM05D001128 ORTHO05D000721 3.2e-12 77.0 451 25.9
VMungo1383G0733 Vigna mungo HOM05D001128 ORTHO05D000721 4.2e-12 76.6 434 26.5
Gorai.006G178800 Gossypium raimondii HOM05D001128 ORTHO05D000721 7.2e-12 75.9 350 29.4
DCAR_028803 Daucus carota HOM05D001128 ORTHO05D000721 9.5e-12 75.5 417 27.6
Duzib114G0703 Durio zibethinus HOM05D001128 ORTHO05D000721 9.5e-12 75.5 186 34.4
GSVIVG01016431001 Vitis vinifera HOM05D001128 ORTHO05D000721 1.6e-11 74.7 285 29.1
MD07G1207900 Malus domestica HOM05D001128 ORTHO05D000721 2.1e-11 74.3 343 28.6
Gohir.A09G161600 Gossypium hirsutum HOM05D001128 ORTHO05D000721 2.8e-11 73.9 354 28.2
Lalb_Chr17g0346461 Lupinus albus HOM05D001128 ORTHO05D000721 2.8e-11 73.9 436 25.5
Potri.006G093000 Populus trichocarpa HOM05D001128 ORTHO05D000721 2.8e-11 73.9 375 26.1
Gohir.D09G157200 Gossypium hirsutum HOM05D001128 ORTHO05D000721 4.7e-11 73.2 349 28.9
TWI53G0706 Tripterygium wilfordii HOM05D001128 ORTHO05D000721 6.1e-11 72.8 481 26.2
CANSAT35G1304 Cannabis sativa HOM05D001128 ORTHO05D000721 8.0e-11 72.4 438 27.6
PGR044G0160 Punica granatum HOM05D001128 ORTHO05D000721 8.0e-11 72.4 353 27.2
Cfa017294 Carpinus fangiana HOM05D001128 ORTHO05D000721 1.0e-10 72.0 483 25.9
Lalb_Chr04g0250911 Lupinus albus HOM05D001128 ORTHO05D000721 1.0e-10 72.0 422 24.4
MD12G1155400 Malus domestica HOM05D001128 ORTHO05D000721 1.4e-10 71.6 468 25.6
Potri.016G105000 Populus trichocarpa HOM05D001128 ORTHO05D000721 1.4e-10 71.6 491 27.7
Prupe.6G265300 Prunus persica HOM05D001128 ORTHO05D000721 3.0e-10 70.5 368 28.8
ATR0210G013 Amborella trichopoda HOM05D001128 ORTHO05D000721 4.0e-10 70.1 360 27.5
Lsat_1_v5_gn_9_31700 Lactuca sativa HOM05D001128 ORTHO05D000721 4.0e-10 70.1 401 26.7
Actinidia13898 Actinidia chinensis HOM05D001128 ORTHO05D000721 5.2e-10 69.7 421 27.1
TPR.G11407 Trifolium pratense HOM05D001128 ORTHO05D000721 5.2e-10 69.7 399 28.8
CiPaw.10G150200 Carya illinoinensis HOM05D001128 ORTHO05D000721 6.8e-10 69.3 479 26.3
AUR62012167 Chenopodium quinoa HOM05D001128 ORTHO05D000721 6.8e-10 69.3 394 27.2
Dinv37107 Davidia involucrata HOM05D001128 ORTHO05D000721 6.8e-10 69.3 205 30.7
Medtr3g069670 Medicago truncatula HOM05D001128 ORTHO05D000721 6.8e-10 69.3 379 30.6
Hund13813 Selenicereus undatus HOM05D001128 ORTHO05D000721 6.8e-10 69.3 344 29.4
Actinidia02379 Actinidia chinensis HOM05D001128 ORTHO05D000721 2.6e-09 67.4 424 26.7
Gohir.A04G086100 Gossypium hirsutum HOM05D001128 ORTHO05D000721 5.7e-09 66.2 339 27.4
Lsat_1_v5_gn_8_14501 Lactuca sativa HOM05D001128 ORTHO05D000721 7.5e-09 65.9 394 24.9
TWI74G1371 Tripterygium wilfordii HOM05D001128 ORTHO05D000721 7.5e-09 65.9 348 27.0
Cc06_g02010 Coffea canephora HOM05D001128 ORTHO05D000721 1.3e-08 65.1 225 31.1
MD04G1140200 Malus domestica HOM05D001128 ORTHO05D000721 1.3e-08 65.1 402 25.9
Sabra16G0104100 Salix brachista HOM05D001128 ORTHO05D000721 1.3e-08 65.1 361 27.1
Sed0015993 Sechium edule HOM05D001128 ORTHO05D000721 1.3e-08 65.1 412 26.2
Sc11g0007590 Simmondsia chinensis HOM05D001128 ORTHO05D000721 1.7e-08 64.7 413 25.7
COL.COLO4_14683 Corchorus olitorius HOM05D001128 ORTHO05D000721 2.2e-08 64.3 347 26.5
HanXRQChr14g0458491 Helianthus annuus HOM05D001128 ORTHO05D000721 2.2e-08 64.3 409 27.4
Nitab4.5_0000008g0230 Nicotiana tabacum HOM05D001128 ORTHO05D000721 2.2e-08 64.3 354 27.4
Gohir.D04G126000 Gossypium hirsutum HOM05D001128 ORTHO05D000721 2.8e-08 63.9 336 26.2
PGSC0003DMG400019191 Solanum tuberosum HOM05D001128 ORTHO05D000721 2.8e-08 63.9 420 28.3
CsaV3_4G025740 Cucumis sativus L. HOM05D001128 ORTHO05D000721 3.7e-08 63.5 455 25.3
Eucgr.J00969 Eucalyptus grandis HOM05D001128 ORTHO05D000721 3.7e-08 63.5 344 25.3
Oeu001830.1 Olea europaea HOM05D001128 ORTHO05D000721 1.1e-07 62.0 355 26.8
MSTRG.10240 Avicennia marina HOM05D001128 ORTHO05D000721 1.4e-07 61.6 431 26.0
Migut.J00260 Erythranthe guttata HOM05D001128 ORTHO05D000721 1.4e-07 61.6 447 25.1
ClCG04G007510 Citrullus lanatus HOM05D001128 ORTHO05D000721 1.8e-07 61.2 458 26.0
Nitab4.5_0002823g0030 Nicotiana tabacum HOM05D001128 ORTHO05D000721 1.8e-07 61.2 436 28.4
Sc10g0001950 Simmondsia chinensis HOM05D001128 ORTHO05D000721 1.8e-07 61.2 267 26.6
Gorai.012G109000 Gossypium raimondii HOM05D001128 ORTHO05D000721 3.1e-07 60.5 336 25.6
TPR.G7175 Trifolium pratense HOM05D001128 ORTHO05D000721 3.1e-07 60.5 78 47.4
MELO3C009213.2 Cucumis melo HOM05D001128 ORTHO05D000721 4.1e-07 60.1 435 25.7
CsaV3_3G034430 Cucumis sativus L. HOM05D001128 ORTHO05D000721 4.1e-07 60.1 439 25.7
MBI05_g02674_MAGBIO Magnolia biondii HOM05D001128 ORTHO05D000721 4.1e-07 60.1 217 33.6
Manes.07G123100 Manihot esculenta HOM05D001128 ORTHO05D000721 4.1e-07 60.1 261 29.1
MELO3C003199.2 Cucumis melo HOM05D001128 ORTHO05D000721 5.4e-07 59.7 351 26.8
Dinv35538 Davidia involucrata HOM05D001128 ORTHO05D000721 7.0e-07 59.3 232 28.0
Nitab4.5_0003264g0030 Nicotiana tabacum HOM05D001128 ORTHO05D000721 7.0e-07 59.3 364 25.8
Duzib128G0075 Durio zibethinus HOM05D001128 ORTHO05D000721 9.2e-07 58.9 377 24.4
Lalb_Chr15g0084451 Lupinus albus HOM05D001128 ORTHO05D000721 9.2e-07 58.9 314 26.8
SalBow4G0348 Salvia bowleyana HOM05D001128 ORTHO05D000721 9.2e-07 58.9 401 25.2
Manes.10G020700 Manihot esculenta HOM05D001128 ORTHO05D000721 1.6e-06 58.2 436 22.9
Oeu013161.1 Olea europaea HOM05D001128 ORTHO05D000721 1.6e-06 58.2 346 25.1
SalBow1G2079 Salvia bowleyana HOM05D001128 ORTHO05D000721 1.6e-06 58.2 442 25.6
Lj1g0009897 Lotus japonicus HOM05D001128 ORTHO05D000721 2.0e-06 57.8 360 26.9
THA.LOC104810062 Tarenaya hassleriana HOM05D001128 ORTHO05D000721 2.0e-06 57.8 68 51.5
Gohir.A11G328200 Gossypium hirsutum HOM05D001128 ORTHO05D000721 3.5e-06 57.0 400 23.2
Peaxi162Scf00132g00911 Petunia axillaris HOM05D001128 ORTHO05D000721 5.9e-06 56.2 229 30.6
PGSC0003DMG400011730 Solanum tuberosum HOM05D001128 ORTHO05D000721 5.9e-06 56.2 450 27.1


User provided reference genes

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