Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G3864 Salvia bowleyana HOM05D001087 ORTHO05D004028 3.4e-121 438.3 218 100.0
SalBow1G1885 Salvia bowleyana HOM05D003448 ORTHO05D004028 2.0e-57 226.5 111 96.4
SalBow5G4342 Salvia bowleyana HOM05D003448 ORTHO05D004028 2.0e-57 226.5 111 96.4
SalBow8G2290 Salvia bowleyana HOM05D003448 ORTHO05D004028 4.8e-43 178.7 102 86.3
SalBow4G1044 Salvia bowleyana HOM05D001087 ORTHO05D005406 1.5e-33 147.1 114 70.2
SGA_v2.0_scaffold44G16961 Striga asiatica HOM05D001087 ORTHO05D005406 2.4e-26 123.2 80 76.2
MSTRG.3036 Avicennia marina HOM05D001087 ORTHO05D005406 5.3e-26 122.1 80 77.5
Migut.F00007 Erythranthe guttata HOM05D001087 ORTHO05D005406 6.9e-26 121.7 146 49.3
CSS0025073 Camellia sinensis var. sinensis HOM05D001087 ORTHO05D005406 2.6e-25 119.8 114 57.9
CiPaw.03G079200 Carya illinoinensis HOM05D001087 ORTHO05D005406 3.4e-25 119.4 114 57.9
Rhsim08G0036900 Rhododendron simsii HOM05D001087 ORTHO05D005406 1.0e-24 117.9 80 72.5
RcHm_v2.0_Chr2g0176781 Rosa chinensis HOM05D001087 ORTHO05D005406 1.3e-24 117.5 114 57.0
Atru.chr6.2747 Acer truncatum HOM05D001087 ORTHO05D005406 1.7e-24 117.1 80 75.0
Lj1g0002000 Lotus japonicus HOM05D001087 ORTHO05D005406 3.8e-24 115.9 80 72.5
Nn4g22026 Nelumbo nucifera HOM05D001087 ORTHO05D005406 3.8e-24 115.9 114 58.8
Ca_08243_v3 Cicer arietinum L. HOM05D001087 ORTHO05D005406 5.0e-24 115.5 80 71.2
Ciclev10014134m.g Citrus clementina HOM05D001087 ORTHO05D005406 5.0e-24 115.5 80 73.8
CsaV3_3G020140 Cucumis sativus L. HOM05D001087 ORTHO05D005406 5.0e-24 115.5 80 71.2
PGR042G1457 Punica granatum HOM05D001087 ORTHO05D005406 5.0e-24 115.5 78 73.1
QL02p063912 Quercus lobata HOM05D001087 ORTHO05D005406 5.0e-24 115.5 114 57.0
Oeu062515.1 Olea europaea HOM05D001087 ORTHO05D005406 6.5e-24 115.2 140 50.0
Actinidia19533 Actinidia chinensis HOM05D001087 ORTHO05D005406 1.1e-23 114.4 79 70.9
ClCG05G012380 Citrullus lanatus HOM05D001087 ORTHO05D005406 1.1e-23 114.4 80 71.2
MELO3C014745.2 Cucumis melo HOM05D001087 ORTHO05D005406 1.1e-23 114.4 80 71.2
MD09G1000300 Malus domestica HOM05D001087 ORTHO05D005406 1.1e-23 114.4 112 54.5
FAN27G2264 Fragaria x ananassa HOM05D001087 ORTHO05D005406 1.4e-23 114.0 114 55.3
PSO478G2418 Papaver somniferum HOM05D001087 ORTHO05D005406 1.4e-23 114.0 80 72.5
GSVIVG01032937001 Vitis vinifera HOM05D001087 ORTHO05D005406 1.4e-23 114.0 80 73.8
PSO017G2606 Papaver somniferum HOM05D001087 ORTHO05D005406 1.9e-23 113.6 80 72.5
Phvul.001G097600 Phaseolus vulgaris HOM05D001087 ORTHO05D005406 1.9e-23 113.6 114 55.3
AUR62032520 Chenopodium quinoa HOM05D001087 ORTHO05D005406 3.2e-23 112.8 140 48.6
FvH4_6g54490 Fragaria vesca HOM05D001087 ORTHO05D005406 3.2e-23 112.8 114 55.3
FAN14G5433 Fragaria x ananassa HOM05D001087 ORTHO05D005406 3.2e-23 112.8 114 55.3
TPR.G31052 Trifolium pratense HOM05D001087 ORTHO05D005406 3.2e-23 112.8 114 54.4
TAR629G2385 Trochodendron aralioides HOM05D001087 ORTHO05D005406 3.2e-23 112.8 78 74.4
CANSAT64G1951 Cannabis sativa HOM05D001087 ORTHO05D005406 4.2e-23 112.5 114 56.1
Thecc.04G053100 Theobroma cacao HOM05D001087 ORTHO05D005406 4.2e-23 112.5 114 55.3
EL10Ac6g13922 Beta vulgaris HOM05D001087 ORTHO05D005406 5.5e-23 112.1 114 52.6
Medtr7g084880 Medicago truncatula HOM05D001087 ORTHO05D005406 5.5e-23 112.1 114 54.4
Psat0s4626g0080 Pisum sativum HOM05D001087 ORTHO05D005406 5.5e-23 112.1 114 55.3
Glyma.16G044400 Glycine max HOM05D001087 ORTHO05D005406 7.2e-23 111.7 114 55.3
Prupe.3G316100 Prunus persica HOM05D001087 ORTHO05D005406 7.2e-23 111.7 114 52.6
DCAR_000957 Daucus carota HOM05D001087 ORTHO05D005406 9.4e-23 111.3 140 47.9
Glyma.19G107500 Glycine max HOM05D001087 ORTHO05D005406 9.4e-23 111.3 114 54.4
Gohir.A08G038200 Gossypium hirsutum HOM05D001087 ORTHO05D005406 1.6e-22 110.5 114 55.3
Lalb_Chr14g0364241 Lupinus albus HOM05D001087 ORTHO05D005406 1.6e-22 110.5 80 70.0
VMungo1383G1594 Vigna mungo HOM05D001087 ORTHO05D005406 1.6e-22 110.5 114 54.4
AUR62017451 Chenopodium quinoa HOM05D001087 ORTHO05D005406 3.6e-22 109.4 140 47.9
Manes.04G095500 Manihot esculenta HOM05D001087 ORTHO05D005406 4.7e-22 109.0 114 54.4
Sabra14G0106400 Salix brachista HOM05D001087 ORTHO05D005406 6.1e-22 108.6 82 70.7
Sed0004915 Sechium edule HOM05D001087 ORTHO05D005406 6.1e-22 108.6 80 70.0
Gohir.D08G048400 Gossypium hirsutum HOM05D001087 ORTHO05D005406 7.9e-22 108.2 114 54.4
Gorai.004G047900 Gossypium raimondii HOM05D001087 ORTHO05D005406 7.9e-22 108.2 114 54.4
COL.COLO4_13413 Corchorus olitorius HOM05D001087 ORTHO05D005406 1.0e-21 107.8 80 70.0
Duzib138G0185 Durio zibethinus HOM05D001087 ORTHO05D005406 1.4e-21 107.5 140 48.6
Lsat_1_v5_gn_3_103380 Lactuca sativa HOM05D001087 ORTHO05D005406 1.4e-21 107.5 140 50.7
TWI32G0903 Tripterygium wilfordii HOM05D001087 ORTHO05D005406 1.4e-21 107.5 114 53.5
arahy.Tifrunner.gnm1.ann1.C4QHPC Arachis hypogaea HOM05D001087 ORTHO05D005406 2.3e-21 106.7 114 51.8
Cc07_g01490 Coffea canephora HOM05D001087 ORTHO05D005406 3.0e-21 106.3 80 68.8
HanXRQChr17g0550851 Helianthus annuus HOM05D001087 ORTHO05D005406 3.9e-21 105.9 140 48.6
Potri.014G141100 Populus trichocarpa HOM05D001087 ORTHO05D005406 3.9e-21 105.9 114 54.4
ATR0582G201 Amborella trichopoda HOM05D001087 ORTHO05D005406 5.2e-21 105.5 140 47.9
HPP92_021688 Vanilla planifolia HOM05D001087 ORTHO05D005406 5.2e-21 105.5 80 67.5
HPP92_021715 Vanilla planifolia HOM05D001087 ORTHO05D005406 6.7e-21 105.1 80 66.2
Aqoxy3G01996 Aquilegia oxysepala HOM05D001087 ORTHO05D005406 1.1e-20 104.4 115 54.8
Eucgr.H05015 Eucalyptus grandis HOM05D001087 ORTHO05D005406 1.5e-20 104.0 80 68.8
Solyc02g094610.1 Solanum lycopersicum HOM05D001087 ORTHO05D005406 2.6e-20 103.2 79 63.3
Sopen02g039270 Solanum pennellii HOM05D001087 ORTHO05D005406 2.6e-20 103.2 79 63.3
Hund04150 Selenicereus undatus HOM05D001087 ORTHO05D005406 3.3e-20 102.8 114 49.1
Ah.02g128690 Amaranthus hybridus HOM05D001087 ORTHO05D005406 2.8e-19 99.8 114 46.5
ECA246G3450 Erigeron canadensis HOM05D001087 ORTHO05D005406 4.8e-19 99.0 140 46.4
Sc16g0004210 Simmondsia chinensis HOM05D001087 ORTHO05D005406 8.2e-19 98.2 79 62.0
THA.LOC104805290 Tarenaya hassleriana HOM05D001087 ORTHO05D005406 8.2e-19 98.2 112 48.2
Thhalv10006676m.g Eutrema salsugineum HOM05D001087 ORTHO05D005406 1.8e-18 97.1 77 63.6
Aa31LG1G1850 Aethionema arabicum HOM05D001087 ORTHO05D005406 3.1e-18 96.3 77 62.3
AL1G24570 Arabidopsis lyrata HOM05D001087 ORTHO05D005406 3.1e-18 96.3 77 63.6
AT1G12930 Arabidopsis thaliana HOM05D001087 ORTHO05D005406 3.1e-18 96.3 77 63.6
CARHR013280 Cardamine hirsuta HOM05D001087 ORTHO05D005406 4.1e-18 95.9 77 62.3
A06p08730 Brassica napus HOM05D001087 ORTHO05D005406 1.2e-17 94.4 77 62.3
C08p47020 Brassica napus HOM05D001087 ORTHO05D005406 1.2e-17 94.4 77 62.3
BolC8t52241H Brassica oleracea HOM05D001087 ORTHO05D005406 1.2e-17 94.4 77 62.3
Sp1g11500 Schrenkiella parvula HOM05D001087 ORTHO05D005406 1.2e-17 94.4 77 62.3
BcaB08g34240 Brassica carinata HOM05D001087 ORTHO05D005406 1.6e-17 94.0 77 62.3
Carub.0001s1270 Capsella rubella HOM05D001087 ORTHO05D005406 1.6e-17 94.0 77 59.7
QL02p063896 Quercus lobata HOM05D001087 ORTHO05D005406 4.5e-17 92.4 65 72.3
A09p63520 Brassica napus HOM05D001087 ORTHO05D005406 5.9e-17 92.0 77 61.0
SalBow5G1076 Salvia bowleyana HOM05D003448 ORTHO05D004028 1.7e-16 90.5 42 90.5
BolC5t29778H Brassica oleracea HOM05D001087 ORTHO05D005406 8.5e-16 88.2 79 60.8
CDE05G0125 Ceratophyllum demersum HOM05D001087 ORTHO05D005406 1.1e-15 87.8 114 47.4
C05p10320 Brassica napus HOM05D001087 ORTHO05D005406 2.5e-15 86.7 79 60.8
Lj7A620G41 Lonicera japonica HOM05D001087 ORTHO05D005406 2.5e-15 86.7 65 69.2
Mapoly0055s0098 Marchantia polymorpha HOM05D001087 ORTHO05D005406 7.2e-15 85.1 79 54.4
MBI07_g11062_MAGBIO Magnolia biondii HOM05D001087 ORTHO05D005406 1.6e-14 84.0 66 65.2
Zm00001eb197740 Zea mays HOM05D001087 ORTHO05D005406 1.6e-14 84.0 79 51.9
Pp3c10_7760 Physcomitrium patens HOM05D001087 ORTHO05D005406 4.7e-14 82.4 80 52.5
Pp3c14_8290 Physcomitrium patens HOM05D001087 ORTHO05D005406 6.1e-14 82.0 80 51.2
Pp3c14_8293 Physcomitrium patens HOM05D001087 ORTHO05D005406 6.1e-14 82.0 80 51.2
arahy.Tifrunner.gnm1.ann1.65DI7F Arachis hypogaea HOM05D001087 ORTHO05D005406 2.3e-13 80.1 97 48.5
SalBow6G2173 Salvia bowleyana HOM05D003098 ORTHO05D004028 8.8e-13 78.2 38 92.1
Nitab4.5_0000519g0400 Nicotiana tabacum HOM05D001087 ORTHO05D005406 1.5e-12 77.4 64 59.4
SEGI_07298 Sequoiadendron giganteum HOM05D001087 ORTHO05D005406 9.7e-12 74.7 74 56.8
Nitab4.5_0002901g0070 Nicotiana tabacum HOM05D001087 ORTHO05D005406 1.3e-11 74.3 62 59.7
CAN.G473.167 Capsicum annuum HOM05D001087 ORTHO05D005406 2.2e-11 73.6 62 58.1
Cc00_g11840 Coffea canephora HOM05D001087 ORTHO05D006222 1.1e-10 71.2 62 61.3
Cpa.g.sc70.26 Carica papaya HOM05D001087 ORTHO05D005406 7.0e-10 68.6 108 39.8
CBR_g30317 Chara braunii HOM05D001087 ORTHO05D005406 7.7e-09 65.1 80 42.5
BraA09t41703Z Brassica rapa HOM05D001087 ORTHO05D005406 1.3e-08 64.3 62 56.5
BcaC05g25140 Brassica carinata HOM05D001087 ORTHO05D005406 2.5e-07 60.1 81 46.9
SMO353G0092 Selaginella moellendorffii HOM05D001087 ORTHO05D005406 2.7e-06 56.6 79 32.9


User provided reference genes

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