Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G3791 Salvia bowleyana HOM05D006343 ORTHO05D005694 1.1e-142 510.0 266 100.0
MSTRG.18339 Avicennia marina HOM05D006343 ORTHO05D005694 1.3e-63 247.3 271 55.7
MSTRG.12522 Avicennia marina HOM05D006343 ORTHO05D005694 1.1e-62 244.2 281 55.5
Oeu055797.1 Olea europaea HOM05D006343 ORTHO05D005694 9.6e-62 241.1 285 53.3
Oeu035725.1 Olea europaea HOM05D003054 ORTHO05D003376 3.1e-52 209.5 243 51.9
Oeu035731.1 Olea europaea HOM05D006343 ORTHO05D005694 2.4e-49 199.9 292 45.5
Dinv43841 Davidia involucrata HOM05D006343 ORTHO05D005694 7.1e-49 198.4 275 48.7
Oeu035719.1 Olea europaea HOM05D003054 ORTHO05D003376 2.3e-47 193.4 249 47.4
Oeu035722.1 Olea europaea HOM05D006343 ORTHO05D005694 8.2e-45 184.9 286 44.8
Rhsim01G0164400 Rhododendron simsii HOM05D006343 ORTHO05D005694 5.1e-39 165.6 297 42.1
Actinidia20887 Actinidia chinensis HOM05D006343 ORTHO05D005694 2.5e-38 163.3 277 38.6
Ciclev10021525m.g Citrus clementina HOM05D006343 ORTHO05D005694 3.3e-38 162.9 294 40.5
SGA_v2.0_scaffold1G00635 Striga asiatica HOM05D006343 ORTHO05D005694 5.7e-38 162.2 328 38.7
CiPaw.02G033200 Carya illinoinensis HOM05D006343 ORTHO05D005694 7.4e-38 161.8 310 40.6
Hma1.2p1_0702F.1_g206150 Hydrangea macrophylla HOM05D006343 ORTHO05D005694 1.4e-36 157.5 296 41.9
Sabra14G0063500 Salix brachista HOM05D006343 ORTHO05D005694 1.4e-36 157.5 311 40.8
TAR629G3314 Trochodendron aralioides HOM05D006343 ORTHO05D005694 4.1e-36 156.0 288 42.7
Cc02_g38320 Coffea canephora HOM05D006343 ORTHO05D005694 1.5e-35 154.1 301 38.5
unitig_22.g5289 Utricularia gibba HOM05D006343 ORTHO05D005694 1.7e-34 150.6 269 46.1
Nitab4.5_0001040g0020 Nicotiana tabacum HOM05D006343 ORTHO05D005694 2.9e-34 149.8 319 37.3
Prupe.2G173800 Prunus persica HOM05D006343 ORTHO05D005694 8.5e-34 148.3 285 40.0
Potri.014G087500 Populus trichocarpa HOM05D006343 ORTHO05D005694 1.4e-33 147.5 304 37.8
Oeu035728.1 Olea europaea HOM05D006343 ORTHO05D005694 1.9e-33 147.1 276 38.4
GSVIVG01026998001 Vitis vinifera HOM05D006343 ORTHO05D005694 2.5e-33 146.7 301 42.2
Nitab4.5_0001655g0110 Nicotiana tabacum HOM05D006343 ORTHO05D005694 3.2e-33 146.4 321 38.3
Manes.01G254700 Manihot esculenta HOM05D006343 ORTHO05D005694 2.7e-32 143.3 314 39.5
Manes.05G031900 Manihot esculenta HOM05D006343 ORTHO05D005694 6.1e-32 142.1 308 38.6
Phvul.010G101000 Phaseolus vulgaris HOM05D006343 ORTHO05D005694 7.9e-32 141.7 289 39.4
Glyma.07G068200 Glycine max HOM05D006343 ORTHO05D005694 1.4e-31 141.0 302 36.8
Dinv32502 Davidia involucrata HOM05D006343 ORTHO05D005694 5.1e-31 139.0 221 41.2
Potri.002G161700 Populus trichocarpa HOM05D006343 ORTHO05D005694 6.7e-31 138.7 312 38.1
CiPaw.01G064000 Carya illinoinensis HOM05D006343 ORTHO05D005694 1.7e-29 134.0 322 37.9
CSS0004449 Camellia sinensis var. sinensis HOM05D006343 ORTHO05D005694 2.8e-29 133.3 293 39.2
vmacro20913 Vaccinium macrocarpon HOM05D006343 ORTHO05D005694 2.8e-29 133.3 304 38.5
VMungo0331G0061 Vigna mungo HOM05D006343 ORTHO05D005694 1.1e-28 131.3 291 39.9
Nn1g01591 Nelumbo nucifera HOM05D006343 ORTHO05D005694 1.8e-28 130.6 307 36.8
RcHm_v2.0_Chr1g0357021 Rosa chinensis HOM05D006343 ORTHO05D005694 1.8e-28 130.6 304 34.2
Sabra02G0128600 Salix brachista HOM05D006343 ORTHO05D005694 1.8e-28 130.6 304 37.2
CANSAT56G2487 Cannabis sativa HOM05D006343 ORTHO05D005694 4.1e-28 129.4 323 38.1
vmacro20912 Vaccinium macrocarpon HOM05D006343 ORTHO05D005694 9.1e-28 128.3 296 37.2
Rhsim01G0164000 Rhododendron simsii HOM05D006343 ORTHO05D005694 3.4e-27 126.3 297 37.0
Atru.chr5.528 Acer truncatum HOM05D006343 ORTHO05D005694 1.3e-26 124.4 302 38.4
Rhsim06G0236200 Rhododendron simsii HOM05D006343 ORTHO05D005694 8.5e-26 121.7 286 37.8
CAN.G650.25 Capsicum annuum HOM05D006343 ORTHO05D005694 1.4e-25 120.9 328 33.8
Lsat_1_v5_gn_7_4100 Lactuca sativa HOM05D006343 ORTHO05D005694 1.2e-24 117.9 294 34.4
FAN01G0301 Fragaria x ananassa HOM05D006343 ORTHO05D005694 3.6e-24 116.3 306 32.0
FAN10G3829 Fragaria x ananassa HOM05D006343 ORTHO05D005694 6.1e-24 115.5 305 32.8
Nitab4.5_0002749g0010 Nicotiana tabacum HOM05D006343 ORTHO05D005694 6.1e-24 115.5 302 35.4
FAN10G0914 Fragaria x ananassa HOM05D006343 ORTHO05D005694 7.9e-24 115.2 305 32.8
Glyma.16G034200 Glycine max HOM05D006343 ORTHO05D005694 1.0e-23 114.8 317 34.4
Nitab4.5_0003369g0030 Nicotiana tabacum HOM05D006343 ORTHO05D005694 1.4e-23 114.4 299 34.8
MD01G1067400 Malus domestica HOM05D006343 ORTHO05D005694 1.8e-23 114.0 312 33.7
Lsat_1_v5_gn_7_4060 Lactuca sativa HOM05D006343 ORTHO05D005694 2.3e-23 113.6 302 32.5
Lj3g0021957 Lotus japonicus HOM05D006343 ORTHO05D005694 3.0e-23 113.2 219 38.8
Eucgr.I00992 Eucalyptus grandis HOM05D006343 ORTHO05D005694 6.7e-23 112.1 303 35.3
Sopen02g019780 Solanum pennellii HOM05D006343 ORTHO05D005694 6.7e-23 112.1 306 37.3
DCAR_015701 Daucus carota HOM05D006343 ORTHO05D005694 1.1e-22 111.3 268 34.7
Migut.D00457 Erythranthe guttata HOM05D006343 ORTHO05D005694 3.3e-22 109.8 177 45.2
FvH4_7g14980 Fragaria vesca HOM05D006343 ORTHO05D005694 4.4e-22 109.4 304 31.2
Solyc02g070700.3 Solanum lycopersicum HOM05D006343 ORTHO05D005694 5.7e-22 109.0 307 36.5
FAN06G0921 Fragaria x ananassa HOM05D006343 ORTHO05D005694 9.7e-22 108.2 304 30.9
FvH4_7g14870 Fragaria vesca HOM05D006343 ORTHO05D005694 1.3e-21 107.8 297 34.0
CDE02G1832 Ceratophyllum demersum HOM05D006343 ORTHO05D005694 1.7e-21 107.5 284 32.4
FAN10G3557 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.7e-21 107.5 304 35.5
CAN.G650.32 Capsicum annuum HOM05D006343 ORTHO05D005694 2.2e-21 107.1 329 32.5
FAN03G1905 Fragaria x ananassa HOM05D006343 ORTHO05D005694 2.8e-21 106.7 297 30.6
Duzib138G0695 Durio zibethinus HOM05D006343 ORTHO05D005694 6.3e-21 105.5 291 38.5
FAN03G1311 Fragaria x ananassa HOM05D006343 ORTHO05D005694 3.1e-20 103.2 304 33.6
MD07G1133500 Malus domestica HOM05D006343 ORTHO05D005694 3.1e-20 103.2 299 32.4
QL04p054168 Quercus lobata HOM05D006343 ORTHO05D005694 5.3e-20 102.4 235 34.0
Aqoxy7G00256 Aquilegia oxysepala HOM05D006343 ORTHO05D005694 9.1e-20 101.7 326 35.6
CAN.G650.35 Capsicum annuum HOM05D006343 ORTHO05D005694 9.1e-20 101.7 324 31.8
FAN06G4353 Fragaria x ananassa HOM05D006343 ORTHO05D005694 9.1e-20 101.7 298 33.9
TWI23G0998 Tripterygium wilfordii HOM05D006343 ORTHO05D005694 9.1e-20 101.7 288 38.9
Lalb_Chr17g0339411 Lupinus albus HOM05D006343 ORTHO05D005694 1.5e-19 100.9 308 35.1
CAN.G2424.1 Capsicum annuum HOM05D006343 ORTHO05D005694 3.4e-19 99.8 359 30.4
CsaV3_6G000720 Cucumis sativus L. HOM05D006343 ORTHO05D005694 1.3e-18 97.8 306 35.6
Cpa.g.sc11.35 Carica papaya HOM05D006343 ORTHO05D005694 2.2e-18 97.1 309 35.0
FAN10G3545 Fragaria x ananassa HOM05D006343 ORTHO05D005694 6.5e-18 95.5 342 32.2
CAN.G650.28 Capsicum annuum HOM05D006343 ORTHO05D005694 1.4e-17 94.4 246 32.9
Gorai.007G101600 Gossypium raimondii HOM05D006343 ORTHO05D005694 3.2e-17 93.2 284 37.3
Potri.014G099800 Populus trichocarpa HOM05D006343 ORTHO05D005694 1.6e-16 90.9 235 31.1
CDE06G1281 Ceratophyllum demersum HOM05D006343 ORTHO05D005694 2.1e-16 90.5 211 34.1
Sed0018743 Sechium edule HOM05D006343 ORTHO05D005694 2.1e-16 90.5 286 35.3
SGA_v2.0_scaffold138G35202 Striga asiatica HOM05D004007 ORTHO05D005127 3.6e-16 89.7 265 33.2
Gohir.D11G095300 Gossypium hirsutum HOM05D006343 ORTHO05D005694 8.0e-16 88.6 288 35.4
unitig_8.g3737 Utricularia gibba HOM05D006343 ORTHO05D005694 1.4e-15 87.8 296 34.1
COL.COLO4_12739 Corchorus olitorius HOM05D006343 ORTHO05D005694 1.8e-15 87.4 290 34.1
Thhalv10028840m.g Eutrema salsugineum HOM05D012121 ORTHO05D005694 6.7e-15 85.5 324 32.7
DCAR_015699 Daucus carota HOM05D006343 ORTHO05D005694 1.1e-14 84.7 271 34.7
THA.LOC104825850 Tarenaya hassleriana HOM05D012121 ORTHO05D005694 7.4e-14 82.0 323 30.7
ECA233G1044 Erigeron canadensis HOM05D006343 ORTHO05D005694 2.2e-13 80.5 273 32.6
PGR042G0313 Punica granatum HOM05D006343 ORTHO05D005694 2.2e-13 80.5 195 34.9
TWI14G1134 Tripterygium wilfordii HOM05D006343 ORTHO05D005694 3.7e-13 79.7 283 34.3
FAN01G2602 Fragaria x ananassa HOM05D006343 ORTHO05D005694 8.2e-13 78.6 193 37.8
FAN10G1634 Fragaria x ananassa HOM05D006343 ORTHO05D005694 4.1e-12 76.3 192 30.2
FAN10G3360 Fragaria x ananassa HOM05D006343 ORTHO05D005694 4.1e-12 76.3 192 30.2
FAN06G3127 Fragaria x ananassa HOM05D006343 ORTHO05D005694 5.3e-12 75.9 192 30.2
PSO478G0137 Papaver somniferum HOM05D020029 ORTHO05D005694 9.1e-12 75.1 210 33.8
FvH4_7g14880 Fragaria vesca HOM05D006343 ORTHO05D005694 1.2e-11 74.7 192 30.2
FAN06G0140 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.2e-11 74.7 192 30.2
Cfa003895 Carpinus fangiana HOM05D006343 ORTHO05D005694 3.5e-11 73.2 281 32.4
PSO782G1147 Papaver somniferum HOM05D020029 ORTHO05D005694 4.5e-11 72.8 215 28.8
PSO478G4526 Papaver somniferum HOM05D020029 ORTHO05D005694 1.0e-10 71.6 121 36.4
PSO782G1271 Papaver somniferum HOM05D020029 ORTHO05D005694 1.7e-10 70.9 191 32.5
CARHR248400 Cardamine hirsuta HOM05D012121 ORTHO05D005694 2.2e-10 70.5 328 26.8
Actinidia10044 Actinidia chinensis HOM05D006343 ORTHO05D005694 2.9e-10 70.1 110 43.6
AL6G53170 Arabidopsis lyrata HOM05D012121 ORTHO05D005694 5.0e-10 69.3 320 30.0
Sp6g00380 Schrenkiella parvula HOM05D012121 ORTHO05D005694 1.1e-09 68.2 324 27.8
Zm00001eb222450 Zea mays HOM05D024295 ORTHO05D020951 1.5e-09 67.8 188 31.9
Medtr3g015950 Medicago truncatula HOM05D006343 ORTHO05D005694 4.2e-09 66.2 285 31.2
Sc01g0003550 Simmondsia chinensis HOM05D006343 ORTHO05D005694 9.4e-09 65.1 272 31.2
AT4G00310 Arabidopsis thaliana HOM05D012121 ORTHO05D005694 1.2e-08 64.7 324 29.3
BcaB01g02239 Brassica carinata HOM05D012121 ORTHO05D005694 1.6e-08 64.3 325 28.6
Medtr8g028845 Medicago truncatula HOM05D006343 ORTHO05D005694 2.7e-08 63.5 206 34.5
MELO3C021196.2 Cucumis melo HOM05D006343 ORTHO05D005694 1.0e-07 61.6 307 30.3
Thecc.01G356100 Theobroma cacao HOM05D006343 ORTHO05D005694 1.8e-07 60.8 284 30.3
Carub.0006s3693 Capsella rubella HOM05D012121 ORTHO05D005694 2.3e-07 60.5 321 28.7
Gohir.D08G153300 Gossypium hirsutum HOM05D006343 ORTHO05D005694 1.2e-06 58.2 282 31.9
Zm00001eb047020 Zea mays HOM05D024295 ORTHO05D020951 2.0e-06 57.4 103 36.9
Duzib133G0920 Durio zibethinus HOM05D006343 ORTHO05D005694 3.3e-06 56.6 291 30.9
ClCG06G003540 Citrullus lanatus HOM05D006343 ORTHO05D005694 5.7e-06 55.8 41 65.9
HPP92_025480 Vanilla planifolia HOM05D049984 ORTHO05D020951 5.7e-06 55.8 212 23.6
PSO782G0031 Papaver somniferum HOM05D020029 ORTHO05D005694 7.5e-06 55.5 216 28.7
PGSC0003DMG400008290 Solanum tuberosum HOM05D006343 ORTHO05D005694 7.5e-06 55.5 168 32.1
Solyc03g095830.3 Solanum lycopersicum HOM05D064734 ORTHO05D005694 9.7e-06 55.1 220 30.0


User provided reference genes

Program Settings