Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G3731 Salvia bowleyana HOM05D007667 ORTHO05D008033 7.2e-257 890.2 488 100.0
SalBow6G3030 Salvia bowleyana HOM05D007667 ORTHO05D008033 1.5e-193 679.9 488 80.7
Migut.J01575 Erythranthe guttata HOM05D007667 ORTHO05D008033 7.1e-79 298.9 511 45.6
MSTRG.6277 Avicennia marina HOM05D007667 ORTHO05D008033 1.1e-68 265.0 512 40.6
SGA_v2.0_scaffold66G22329 Striga asiatica HOM05D007667 ORTHO05D008033 4.3e-60 236.5 503 41.2
Oeu041986.1 Olea europaea HOM05D007667 ORTHO05D008033 1.5e-52 211.5 500 36.0
Oeu060747.1 Olea europaea HOM05D007667 ORTHO05D008033 2.1e-46 191.0 491 34.8
MD12G1111200 Malus domestica HOM05D007667 ORTHO05D008033 8.2e-43 179.1 493 33.3
GSVIVG01025830001 Vitis vinifera HOM05D007667 ORTHO05D008033 1.7e-40 171.4 490 33.1
CiPaw.09G161700 Carya illinoinensis HOM05D007667 ORTHO05D008033 2.2e-40 171.0 472 30.7
Cfa019904 Carpinus fangiana HOM05D007667 ORTHO05D008033 4.2e-39 166.8 494 32.2
QL07p015392 Quercus lobata HOM05D007667 ORTHO05D008033 5.5e-39 166.4 491 31.8
PGR142G2092 Punica granatum HOM05D007667 ORTHO05D008033 3.9e-37 160.2 510 32.5
arahy.Tifrunner.gnm1.ann1.B2YDCU Arachis hypogaea HOM05D007667 ORTHO05D008033 1.5e-36 158.3 495 31.9
Sabra16G0030500 Salix brachista HOM05D007667 ORTHO05D008033 3.3e-36 157.1 504 32.1
arahy.Tifrunner.gnm1.ann1.2JVN0K Arachis hypogaea HOM05D007667 ORTHO05D008033 4.4e-36 156.8 496 31.7
Psat0s3111g0200 Pisum sativum HOM05D007667 ORTHO05D008033 9.7e-36 155.6 492 30.7
Phvul.001G101500 Phaseolus vulgaris HOM05D007667 ORTHO05D008033 2.8e-35 154.1 491 31.0
VMungo1383G2866 Vigna mungo HOM05D007667 ORTHO05D008033 6.3e-35 152.9 493 31.2
Glyma.19G122200 Glycine max HOM05D007667 ORTHO05D008033 8.2e-35 152.5 496 30.2
Lj1g0016001 Lotus japonicus HOM05D007667 ORTHO05D008033 1.8e-34 151.4 498 30.3
Potri.016G024600 Populus trichocarpa HOM05D007667 ORTHO05D008033 4.1e-34 150.2 499 31.3
Medtr7g087970 Medicago truncatula HOM05D007667 ORTHO05D008033 1.6e-33 148.3 492 30.3
Sc13g0000730 Simmondsia chinensis HOM05D007667 ORTHO05D008033 2.6e-33 147.5 487 31.6
Lalb_Chr14g0365211 Lupinus albus HOM05D007667 ORTHO05D008033 1.3e-32 145.2 493 28.8
Glyma.03G003800 Glycine max HOM05D007667 ORTHO05D008033 8.5e-32 142.5 490 30.8
Cc06_g20370 Coffea canephora HOM05D007667 ORTHO05D008033 1.1e-31 142.1 512 28.5
CANSAT01G1982 Cannabis sativa HOM05D007667 ORTHO05D008033 2.5e-31 141.0 478 29.3
Potri.006G026600 Populus trichocarpa HOM05D007667 ORTHO05D008033 1.2e-28 132.1 469 31.3
TWI77G1010 Tripterygium wilfordii HOM05D007667 ORTHO05D008033 7.5e-28 129.4 468 30.6
CSS0027019 Camellia sinensis var. sinensis HOM05D007667 ORTHO05D008033 9.7e-28 129.0 410 32.7
TAR623G0652 Trochodendron aralioides HOM05D007667 ORTHO05D008033 1.3e-27 128.6 498 29.7
Eucgr.K01702 Eucalyptus grandis HOM05D007667 ORTHO05D008033 2.8e-27 127.5 479 29.4
Sabra06G0019700 Salix brachista HOM05D007667 ORTHO05D008033 2.8e-27 127.5 477 29.1
Haze_20347 Corylus avellana HOM05D007667 ORTHO05D008033 1.4e-26 125.2 432 31.0
Sed0012185 Sechium edule HOM05D007667 ORTHO05D008033 4.1e-26 123.6 519 28.5
MBI13_g29622_MAGBIO Magnolia biondii HOM05D007667 ORTHO05D008033 7.0e-26 122.9 476 30.0
TPR.G23684 Trifolium pratense HOM05D007667 ORTHO05D008033 7.0e-26 122.9 454 29.5
Lj1A1064T35 Lonicera japonica HOM05D007667 ORTHO05D008033 2.7e-25 120.9 217 38.2
Hund19052 Selenicereus undatus HOM05D007667 ORTHO05D008033 1.0e-24 119.0 480 29.0
Prupe.7G023900 Prunus persica HOM05D007667 ORTHO05D008033 9.4e-23 112.5 260 40.0
Dinv02787 Davidia involucrata HOM05D007667 ORTHO05D008033 5.2e-21 106.7 200 42.5
CsaV3_4G028970 Cucumis sativus L. HOM05D007667 ORTHO05D008033 1.5e-20 105.1 515 28.2
Nn7g37184 Nelumbo nucifera HOM05D007667 ORTHO05D001109 2.0e-20 104.8 248 35.9
Thecc.05G130400 Theobroma cacao HOM05D007667 ORTHO05D008033 2.0e-20 104.8 459 26.6
ClCG04G005020 Citrullus lanatus HOM05D007667 ORTHO05D008033 2.6e-20 104.4 518 28.2
COL.COLO4_22773 Corchorus olitorius HOM05D007667 ORTHO05D008033 2.6e-20 104.4 144 43.8
RhsimUnG0021200 Rhododendron simsii HOM05D007667 ORTHO05D008033 7.5e-20 102.8 526 26.8
DCAR_020622 Daucus carota HOM05D007667 ORTHO05D008033 9.8e-20 102.4 108 52.8
Ciclev10012153m.g Citrus clementina HOM05D007667 ORTHO05D008033 1.3e-19 102.1 126 43.7
Ca_08329_v3 Cicer arietinum L. HOM05D007667 ORTHO05D008033 1.7e-19 101.7 252 36.9
vmacro07594 Vaccinium macrocarpon HOM05D007667 ORTHO05D008033 2.8e-19 100.9 493 26.4
Atru.chr8.918 Acer truncatum HOM05D007667 ORTHO05D008033 3.7e-19 100.5 103 53.4
Duzib128G0300 Durio zibethinus HOM05D007667 ORTHO05D008033 7.0e-18 96.3 109 46.8
unitig_744.g24157 Utricularia gibba HOM05D007667 ORTHO05D008033 2.0e-17 94.7 219 38.4
Manes.08G067300 Manihot esculenta HOM05D007667 ORTHO05D008033 5.9e-17 93.2 409 27.6
Cfa010473 Carpinus fangiana HOM05D007667 ORTHO05D008033 1.0e-16 92.4 182 39.6
arahy.Tifrunner.gnm1.ann1.EU10QV Arachis hypogaea HOM05D007667 ORTHO05D008033 2.3e-16 91.3 196 38.3
RcHm_v2.0_Chr3g0495051 Rosa chinensis HOM05D007667 ORTHO05D008033 2.9e-16 90.9 495 26.5
arahy.Tifrunner.gnm1.ann1.8XR3F9 Arachis hypogaea HOM05D007667 ORTHO05D008033 5.0e-16 90.1 196 39.8
Lalb_Chr22g0358171 Lupinus albus HOM05D007667 ORTHO05D008033 8.6e-16 89.4 170 40.0
Lalb_Chr22g0358161 Lupinus albus HOM05D007667 ORTHO05D008033 1.1e-15 89.0 103 42.7
ClCG10G016970 Citrullus lanatus HOM05D007667 ORTHO05D008033 4.2e-15 87.0 68 64.7
Aqoxy3G03841 Aquilegia oxysepala HOM05D007667 ORTHO05D008033 1.6e-14 85.1 471 24.2
HPP92_012452 Vanilla planifolia HOM05D007667 ORTHO05D008033 2.1e-14 84.7 208 38.0
MELO3C030720.2 Cucumis melo HOM05D007667 ORTHO05D008033 6.1e-14 83.2 68 61.8
PGSC0003DMG400029088 Solanum tuberosum HOM05D007667 ORTHO05D008033 1.0e-13 82.4 67 56.7
Ah.13g077440 Amaranthus hybridus HOM05D007667 ORTHO05D008033 1.4e-13 82.0 467 26.1
Nitab4.5_0002201g0030 Nicotiana tabacum HOM05D007667 ORTHO05D008033 1.4e-13 82.0 186 41.9
Solyc08g067000.3 Solanum lycopersicum HOM05D007667 ORTHO05D008033 1.5e-12 78.6 67 55.2
Actinidia37860 Actinidia chinensis HOM05D007667 ORTHO05D008033 4.4e-12 77.0 79 54.4
THA.LOC104803305 Tarenaya hassleriana HOM05D009749 ORTHO05D008033 9.8e-12 75.9 83 45.8
CsaV3_3G039420 Cucumis sativus L. HOM05D007667 ORTHO05D008033 1.7e-11 75.1 68 58.8
arahy.Tifrunner.gnm1.ann1.3W78Z9 Arachis hypogaea HOM05D007667 ORTHO05D008033 2.2e-11 74.7 162 40.1
PSO384G0308 Papaver somniferum HOM05D007667 ORTHO05D008033 1.4e-10 72.0 530 24.0
EL10Ac3g07362 Beta vulgaris HOM05D007667 ORTHO05D008033 2.4e-10 71.2 472 25.8
ATR1096G118 Amborella trichopoda HOM05D007667 ORTHO05D008033 7.0e-10 69.7 184 36.4
AUR62043193 Chenopodium quinoa HOM05D003743 ORTHO05D004311 7.0e-10 69.7 440 27.3
Sed0023543 Sechium edule HOM05D007667 ORTHO05D008033 9.2e-10 69.3 66 60.6
Sopen08g020950 Solanum pennellii HOM05D007667 ORTHO05D008033 2.0e-09 68.2 59 54.2
BcaC07g40118 Brassica carinata HOM05D009749 ORTHO05D008033 2.7e-09 67.8 88 40.9
A07p23080 Brassica napus HOM05D009749 ORTHO05D008033 2.7e-09 67.8 97 38.1
BraA07t29970Z Brassica rapa HOM05D009749 ORTHO05D008033 2.7e-09 67.8 97 38.1
AUR62020980 Chenopodium quinoa HOM05D007667 ORTHO05D008033 2.7e-09 67.8 75 52.0
MELO3C019169.2 Cucumis melo HOM05D007667 ORTHO05D008033 3.5e-09 67.4 76 46.1
BolC4t25234H Brassica oleracea HOM05D009749 ORTHO05D008033 4.5e-09 67.0 92 38.0
C04p35700 Brassica napus HOM05D009749 ORTHO05D008033 5.9e-09 66.6 92 38.0
BcaB02g08346 Brassica carinata HOM05D009749 ORTHO05D008033 7.8e-09 66.2 92 38.0
A04p03560 Brassica napus HOM05D009749 ORTHO05D008033 7.8e-09 66.2 92 39.1
BraA04t16080Z Brassica rapa HOM05D009749 ORTHO05D008033 7.8e-09 66.2 92 39.1
CARHR166960 Cardamine hirsuta HOM05D009749 ORTHO05D008033 1.0e-08 65.9 93 39.8
arahy.Tifrunner.gnm1.ann1.8931ZB Arachis hypogaea HOM05D007667 ORTHO05D008033 1.3e-08 65.5 123 44.7
Carub.0005s2354 Capsella rubella HOM05D009749 ORTHO05D008033 1.3e-08 65.5 95 36.8
Thhalv10006250m.g Eutrema salsugineum HOM05D009749 ORTHO05D008033 1.3e-08 65.5 89 40.4
AL5G38190 Arabidopsis lyrata HOM05D009749 ORTHO05D008033 1.7e-08 65.1 95 36.8
BcaC08g44807 Brassica carinata HOM05D009749 ORTHO05D008033 1.7e-08 65.1 97 37.1
A09p49630 Brassica napus HOM05D009749 ORTHO05D008033 1.7e-08 65.1 96 39.6
BolC6t37547H Brassica oleracea HOM05D009749 ORTHO05D008033 1.7e-08 65.1 97 37.1
BraA09t40416Z Brassica rapa HOM05D009749 ORTHO05D008033 1.7e-08 65.1 96 39.6
Sp5g05780 Schrenkiella parvula HOM05D009749 ORTHO05D008033 2.3e-08 64.7 49 55.1
BcaB02g07636 Brassica carinata HOM05D009749 ORTHO05D008033 3.8e-08 63.9 97 37.1
BcaC07g39991 Brassica carinata HOM05D009749 ORTHO05D008033 3.8e-08 63.9 96 37.5
BolC8t50822H Brassica oleracea HOM05D009749 ORTHO05D008033 3.8e-08 63.9 96 37.5
PSO339G5815 Papaver somniferum HOM05D007667 ORTHO05D008033 3.8e-08 63.9 500 24.0
AT3G56810 Arabidopsis thaliana HOM05D009749 ORTHO05D008033 5.0e-08 63.5 95 35.8
C06p23780 Brassica napus HOM05D009749 ORTHO05D008033 5.0e-08 63.5 97 36.1
Cpa.g.sc33.176 Carica papaya HOM05D007667 ORTHO05D008033 6.6e-08 63.2 159 34.0
Dinv21555 Davidia involucrata HOM05D007667 ORTHO05D008033 1.1e-07 62.4 130 36.9
arahy.Tifrunner.gnm1.ann1.S7MPKE Arachis hypogaea HOM05D007667 ORTHO05D008033 1.9e-07 61.6 152 36.8
arahy.Tifrunner.gnm1.ann1.W45WAC Arachis hypogaea HOM05D007667 ORTHO05D008033 5.6e-07 60.1 134 41.0
arahy.Tifrunner.gnm1.ann1.NYTL45 Arachis hypogaea HOM05D007667 ORTHO05D008033 7.3e-07 59.7 152 35.5
C08p32040 Brassica napus HOM05D009749 ORTHO05D008033 9.5e-07 59.3 96 35.4
MBI13_g08646_MAGBIO Magnolia biondii HOM05D007667 ORTHO05D008033 2.1e-06 58.2 79 40.5
HPP92_014340 Vanilla planifolia HOM05D007667 ORTHO05D008033 2.1e-06 58.2 170 32.4
arahy.Tifrunner.gnm1.ann1.48UEJW Arachis hypogaea HOM05D007667 ORTHO05D008033 4.7e-06 57.0 155 36.8


User provided reference genes

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