Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G3564 Salvia bowleyana HOM05D003975 ORTHO05D009899 1.5e-53 212.6 109 100.0
Migut.D02414 Erythranthe guttata HOM05D003975 ORTHO05D009899 1.8e-38 162.5 79 94.9
Thecc.09G275700 Theobroma cacao HOM05D003975 ORTHO05D009899 3.1e-35 151.8 79 81.0
CSS0027551 Camellia sinensis var. sinensis HOM05D003975 ORTHO05D009899 5.3e-35 151.0 79 86.1
RcHm_v2.0_Chr5g0047291 Rosa chinensis HOM05D003975 ORTHO05D009899 7.0e-35 150.6 79 83.5
GSVIVG01036058001 Vitis vinifera HOM05D003975 ORTHO05D009899 7.0e-35 150.6 79 83.5
Gorai.001G124000 Gossypium raimondii HOM05D003975 ORTHO05D009899 2.7e-34 148.7 79 78.5
Gohir.D07G115700 Gossypium hirsutum HOM05D003975 ORTHO05D009899 7.7e-34 147.1 79 77.2
Thecc.09G155000 Theobroma cacao HOM05D003975 ORTHO05D009899 7.7e-34 147.1 79 78.5
Duzib150G1666 Durio zibethinus HOM05D003975 ORTHO05D009899 1.0e-33 146.7 79 79.7
Atru.chr3.3141 Acer truncatum HOM05D003975 ORTHO05D009899 6.5e-33 144.1 83 79.5
Gohir.A07G112200 Gossypium hirsutum HOM05D003975 ORTHO05D009899 8.5e-33 143.7 79 75.9
FAN21G0333 Fragaria x ananassa HOM05D004708 ORTHO05D005573 1.1e-32 143.3 83 78.3
Hma1.2p1_0793F.1_g218650 Hydrangea macrophylla HOM05D003975 ORTHO05D009899 1.1e-32 143.3 79 81.0
ClCG02G022390 Citrullus lanatus HOM05D003975 ORTHO05D009899 1.5e-32 142.9 81 77.8
FAN11G2897 Fragaria x ananassa HOM05D004708 ORTHO05D009899 1.5e-32 142.9 83 78.3
CAN.G745.37 Capsicum annuum HOM05D003975 ORTHO05D009899 2.5e-32 142.1 79 78.5
MD03G1152900 Malus domestica HOM05D003975 ORTHO05D009899 2.5e-32 142.1 81 77.8
QL01p011344 Quercus lobata HOM05D003975 ORTHO05D009899 2.5e-32 142.1 81 70.4
Sed0002680 Sechium edule HOM05D003975 ORTHO05D009899 2.5e-32 142.1 80 77.5
Solyc11g068810.2 Solanum lycopersicum HOM05D003975 ORTHO05D009899 3.2e-32 141.7 79 77.2
Sopen11g027530 Solanum pennellii HOM05D003975 ORTHO05D009899 3.2e-32 141.7 79 77.2
Nitab4.5_0000893g0020 Nicotiana tabacum HOM05D003975 ORTHO05D009899 4.2e-32 141.4 79 78.5
Prupe.6G140000 Prunus persica HOM05D003975 ORTHO05D009899 4.2e-32 141.4 79 78.5
Nitab4.5_0001135g0190 Nicotiana tabacum HOM05D003975 ORTHO05D009899 5.5e-32 141.0 79 79.7
Cfa009967 Carpinus fangiana HOM05D003975 ORTHO05D009899 7.2e-32 140.6 79 72.2
CAN.G745.38 Capsicum annuum HOM05D003975 ORTHO05D009899 9.4e-32 140.2 79 77.2
DCAR_013070 Daucus carota HOM05D003975 ORTHO05D009899 2.7e-31 138.7 80 75.0
PGSC0003DMG400019630 Solanum tuberosum HOM05D003975 ORTHO05D009899 2.7e-31 138.7 79 75.9
Cc01_g08600 Coffea canephora HOM05D003975 ORTHO05D009899 4.7e-31 137.9 81 76.5
Dinv08130 Davidia involucrata HOM05D003975 ORTHO05D009899 4.7e-31 137.9 79 77.2
Haze_23328 Corylus avellana HOM05D003975 ORTHO05D009899 6.1e-31 137.5 79 70.9
Eucgr.J00540 Eucalyptus grandis HOM05D003975 ORTHO05D009899 6.1e-31 137.5 79 74.7
unitig_0.g1469 Utricularia gibba HOM05D003975 ORTHO05D009899 6.1e-31 137.5 79 77.2
COL.COLO4_22656 Corchorus olitorius HOM05D003975 ORTHO05D009899 8.0e-31 137.1 86 72.1
Nn6g34748 Nelumbo nucifera HOM05D003975 ORTHO05D009899 1.4e-30 136.3 82 74.4
PSO339G0200 Papaver somniferum HOM05D003975 ORTHO05D009899 1.8e-30 136.0 81 72.8
PSO384G0061 Papaver somniferum HOM05D003975 ORTHO05D009899 1.8e-30 136.0 81 72.8
MBI01_g04527_MAGBIO Magnolia biondii HOM05D003975 ORTHO05D009899 4.0e-30 134.8 79 73.4
HanXRQChr09g0248811 Helianthus annuus HOM05D003975 ORTHO05D009899 5.2e-30 134.4 77 72.7
Aqoxy4G02677 Aquilegia oxysepala HOM05D003975 ORTHO05D009899 6.8e-30 134.0 85 70.6
MELO3C014515.2 Cucumis melo HOM05D003975 ORTHO05D009899 8.8e-30 133.7 79 74.7
Lsat_1_v5_gn_2_56181 Lactuca sativa HOM05D000240 ORTHO05D001153 1.2e-29 133.3 84 72.6
ECA238G1997 Erigeron canadensis HOM05D003975 ORTHO05D009899 2.0e-29 132.5 79 73.4
TAR633G2299 Trochodendron aralioides HOM05D003975 ORTHO05D009899 2.6e-29 132.1 71 74.6
CANSAT54G1521 Cannabis sativa HOM05D003975 ORTHO05D009899 3.4e-29 131.7 77 72.7
Peaxi162Scf00224g00092 Petunia axillaris HOM05D003975 ORTHO05D009899 5.7e-29 131.0 74 78.4
TWI31G0968 Tripterygium wilfordii HOM05D003975 ORTHO05D009899 5.7e-29 131.0 78 73.1
Sabra04G0136000 Salix brachista HOM05D003975 ORTHO05D009762 2.8e-28 128.6 86 65.1
ATR0772G086 Amborella trichopoda HOM05D003975 ORTHO05D009899 3.7e-28 128.3 83 69.9
Lalb_Chr09g0335081 Lupinus albus HOM05D003975 ORTHO05D009899 6.3e-28 127.5 79 68.4
Potri.004G201000 Populus trichocarpa HOM05D003975 ORTHO05D009899 8.3e-28 127.1 86 65.1
Potri.009G162200 Populus trichocarpa HOM05D003975 ORTHO05D009899 3.1e-27 125.2 86 62.8
AUR62011465 Chenopodium quinoa HOM05D003975 ORTHO05D009899 4.1e-27 124.8 79 68.4
Ciclev10029713m.g Citrus clementina HOM05D003975 ORTHO05D009899 5.4e-27 124.4 83 67.5
CsaV3_6G038520 Cucumis sativus L. HOM05D003975 ORTHO05D009899 7.0e-27 124.0 74 68.9
THA.LOC104799562 Tarenaya hassleriana HOM05D003975 ORTHO05D009899 1.2e-26 123.2 80 70.0
arahy.Tifrunner.gnm1.ann1.QQFJ2J Arachis hypogaea HOM05D003975 ORTHO05D009899 2.7e-26 122.1 79 64.6
arahy.Tifrunner.gnm1.ann1.V52YDZ Arachis hypogaea HOM05D003975 ORTHO05D009899 2.7e-26 122.1 79 64.6
Glyma.08G290000 Glycine max HOM05D003975 ORTHO05D009899 2.7e-26 122.1 78 65.4
Glyma.18G134500 Glycine max HOM05D003975 ORTHO05D009899 5.9e-26 120.9 78 64.1
Sabra09G0126700 Salix brachista HOM05D003975 ORTHO05D009762 7.7e-26 120.6 86 59.3
Sabra15G0031600 Salix brachista HOM05D003975 ORTHO05D009899 7.7e-26 120.6 86 59.3
Sabra15G0048400 Salix brachista HOM05D003975 ORTHO05D009899 7.7e-26 120.6 86 59.3
Sabra15G0060100 Salix brachista HOM05D003975 ORTHO05D009899 7.7e-26 120.6 86 59.3
Sc03g0003650 Simmondsia chinensis HOM05D003975 ORTHO05D009899 7.7e-26 120.6 79 68.4
BcaC04g19558 Brassica carinata HOM05D003975 ORTHO05D009899 2.9e-25 118.6 81 66.7
C09p54430 Brassica napus HOM05D003975 ORTHO05D009899 2.9e-25 118.6 81 66.7
BolC9t58312H Brassica oleracea HOM05D003975 ORTHO05D009899 2.9e-25 118.6 81 66.7
AUR62016590 Chenopodium quinoa HOM05D003975 ORTHO05D009899 2.9e-25 118.6 79 65.8
Phvul.003G054000 Phaseolus vulgaris HOM05D003975 ORTHO05D009899 2.9e-25 118.6 78 61.5
Sabra15G0053200 Salix brachista HOM05D003975 ORTHO05D009899 2.9e-25 118.6 87 57.5
A10p18580 Brassica napus HOM05D003975 ORTHO05D009899 3.8e-25 118.2 81 66.7
Sabra15G0046300 Salix brachista HOM05D003975 ORTHO05D009899 3.8e-25 118.2 85 58.8
Sabra15G0052000 Salix brachista HOM05D003975 ORTHO05D009899 3.8e-25 118.2 85 58.8
Sabra15G0053900 Salix brachista HOM05D003975 ORTHO05D009899 3.8e-25 118.2 85 58.8
EL10Ac9g21860 Beta vulgaris HOM05D003975 ORTHO05D009899 5.0e-25 117.9 79 65.8
BraA10t43938Z Brassica rapa HOM05D003975 ORTHO05D009899 3.3e-24 115.2 81 65.4
Ah.01g020290 Amaranthus hybridus HOM05D003975 ORTHO05D009899 4.2e-24 114.8 80 62.5
CARHR191340 Cardamine hirsuta HOM05D003975 ORTHO05D009899 4.2e-24 114.8 81 66.7
Sp6g23020 Schrenkiella parvula HOM05D003975 ORTHO05D009899 4.2e-24 114.8 81 66.7
AT5G22210 Arabidopsis thaliana HOM05D003975 ORTHO05D009899 5.5e-24 114.4 81 66.7
BcaB08g36448 Brassica carinata HOM05D003975 ORTHO05D009899 1.2e-23 113.2 81 65.4
HPP92_009773 Vanilla planifolia HOM05D000917 ORTHO05D009899 1.6e-23 112.8 80 58.8
Carub.0006s1995 Capsella rubella HOM05D003975 ORTHO05D009899 4.7e-23 111.3 81 64.2
AL6G33210 Arabidopsis lyrata HOM05D003975 ORTHO05D009899 6.1e-23 110.9 81 65.4
HPP92_009742 Vanilla planifolia HOM05D000917 ORTHO05D000764 1.0e-22 110.2 81 58.0
TAR268G0001 Trochodendron aralioides HOM05D001423 ORTHO05D001412 1.2e-18 96.7 72 59.7
MBI04_g20761_MAGBIO Magnolia biondii HOM05D003975 ORTHO05D009899 9.5e-08 60.5 45 53.3
SEGI_31848 Sequoiadendron giganteum HOM05D003975 ORTHO05D009899 4.0e-06 55.1 40 52.5


User provided reference genes

Program Settings