Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G3524 Salvia bowleyana HOM05D005023 ORTHO05D006009 1.2e-189 666.4 333 100.0
SalBow6G3383 Salvia bowleyana HOM05D005023 ORTHO05D006009 4.9e-164 581.3 292 98.6
SalBow6G3389 Salvia bowleyana HOM05D005023 ORTHO05D006009 4.9e-164 581.3 307 95.4
SalBow6G6227 Salvia bowleyana HOM05D005023 ORTHO05D006009 4.9e-164 581.3 292 98.6
SalBow6G1717 Salvia bowleyana HOM05D005023 ORTHO05D006009 1.1e-163 580.1 303 96.0
SalBow6G4332 Salvia bowleyana HOM05D005023 ORTHO05D006009 1.1e-163 580.1 289 99.3
SalBow6G6031 Salvia bowleyana HOM05D005023 ORTHO05D006009 1.4e-163 579.7 307 95.4
SalBow6G2872 Salvia bowleyana HOM05D005023 ORTHO05D006009 2.4e-163 578.9 288 100.0
SalBow6G6846 Salvia bowleyana HOM05D005023 ORTHO05D006009 5.2e-158 561.2 285 97.5
SalBow6G6255 Salvia bowleyana HOM05D005023 ORTHO05D006009 6.8e-158 560.8 285 97.5
SalBow6G4088 Salvia bowleyana HOM05D005023 ORTHO05D006009 7.1e-147 524.2 266 98.5
SalBow8G0269 Salvia bowleyana HOM05D005023 ORTHO05D006009 2.8e-143 512.3 267 96.6
SalBow6G3781 Salvia bowleyana HOM05D005023 ORTHO05D006009 1.7e-140 503.1 249 99.2
SalBow6G0983 Salvia bowleyana HOM05D005023 ORTHO05D006009 2.7e-106 389.4 271 78.6
SalBow6G0969 Salvia bowleyana HOM05D005023 ORTHO05D006009 9.4e-99 364.4 198 94.4
SalBow6G5471 Salvia bowleyana HOM05D005023 ORTHO05D006009 1.8e-94 350.1 180 97.8
SalBow6G6268 Salvia bowleyana HOM05D005023 ORTHO05D006009 7.0e-94 348.2 178 96.1
SalBow6G1311 Salvia bowleyana HOM05D005023 ORTHO05D006009 1.6e-93 347.1 180 97.2
SalBow6G0951 Salvia bowleyana HOM05D005023 ORTHO05D006009 2.0e-88 330.1 162 98.8
Migut.E00780 Erythranthe guttata HOM05D005023 ORTHO05D006009 1.4e-81 307.4 272 58.5
SGA_v2.0_scaffold6G03150 Striga asiatica HOM05D005023 ORTHO05D006009 3.4e-80 302.8 310 54.5
MSTRG.1995 Avicennia marina HOM05D005023 ORTHO05D006009 3.7e-79 299.3 267 60.7
Cc08_g03230 Coffea canephora HOM05D005023 ORTHO05D006009 1.2e-64 251.1 276 47.8
Nitab4.5_0002380g0110 Nicotiana tabacum HOM05D005023 ORTHO05D006009 3.4e-64 249.6 275 47.6
PGSC0003DMG400014810 Solanum tuberosum HOM05D005023 ORTHO05D006009 3.4e-64 249.6 275 48.0
Lj2A234G45 Lonicera japonica HOM05D005023 ORTHO05D006009 3.7e-63 246.1 311 45.7
Sopen08g025130 Solanum pennellii HOM05D005023 ORTHO05D006009 8.3e-63 245.0 275 47.3
Dinv28986 Davidia involucrata HOM05D005023 ORTHO05D006009 2.4e-62 243.4 245 51.4
Solyc08g076570.3 Solanum lycopersicum HOM05D005023 ORTHO05D006009 2.4e-62 243.4 283 45.9
Nitab4.5_0004669g0010 Nicotiana tabacum HOM05D005023 ORTHO05D006009 4.1e-62 242.7 245 49.4
Peaxi162Scf00170g00918 Petunia axillaris HOM05D005023 ORTHO05D006009 1.6e-61 240.7 270 47.8
CSS0008599 Camellia sinensis var. sinensis HOM05D005023 ORTHO05D006009 1.7e-60 237.3 246 50.0
Nitab4.5_0000353g0050 Nicotiana tabacum HOM05D005023 ORTHO05D006009 1.7e-60 237.3 271 47.2
Nitab4.5_0004839g0010 Nicotiana tabacum HOM05D005023 ORTHO05D006009 3.0e-60 236.5 275 45.5
QL12p004398 Quercus lobata HOM05D005023 ORTHO05D006009 7.3e-59 231.9 262 46.9
Actinidia09175 Actinidia chinensis HOM05D005023 ORTHO05D006009 1.2e-58 231.1 246 48.8
Actinidia25987 Actinidia chinensis HOM05D005023 ORTHO05D006009 1.6e-58 230.7 245 49.8
CiPaw.11G096900 Carya illinoinensis HOM05D005023 ORTHO05D006009 3.6e-58 229.6 252 48.0
CAN.G298.60 Capsicum annuum HOM05D005023 ORTHO05D006009 4.7e-58 229.2 245 48.2
CAN.G298.61 Capsicum annuum HOM05D005023 ORTHO05D006009 4.7e-58 229.2 245 48.2
CAN.G726.32 Capsicum annuum HOM05D005023 ORTHO05D006009 4.7e-58 229.2 245 48.2
vmacro00304 Vaccinium macrocarpon HOM05D005023 ORTHO05D006009 1.8e-57 227.3 256 49.2
Hma1.2p1_2161F.1_g315620 Hydrangea macrophylla HOM05D005023 ORTHO05D006009 5.2e-57 225.7 246 49.6
Rhsim07G0130800 Rhododendron simsii HOM05D005023 ORTHO05D006009 1.2e-56 224.6 244 50.4
Aqoxy1G01584 Aquilegia oxysepala HOM05D005023 ORTHO05D006009 2.0e-56 223.8 243 46.9
Potri.003G095200 Populus trichocarpa HOM05D005023 ORTHO05D006009 2.0e-56 223.8 251 48.6
SalBow6G0459 Salvia bowleyana HOM05D005023 ORTHO05D006009 2.0e-56 223.8 106 99.1
PSO170G6706 Papaver somniferum HOM05D005023 ORTHO05D006009 9.8e-56 221.5 258 47.3
Manes.02G223400 Manihot esculenta HOM05D005023 ORTHO05D006009 1.3e-55 221.1 248 48.8
PSO302G0152 Papaver somniferum HOM05D005023 ORTHO05D006009 2.9e-55 219.9 257 47.5
Cfa012488 Carpinus fangiana HOM05D005023 ORTHO05D006009 7.1e-54 215.3 254 42.9
MD06G1038100 Malus domestica HOM05D005023 ORTHO05D006009 7.1e-54 215.3 259 43.2
Ciclev10016033m.g Citrus clementina HOM05D005023 ORTHO05D006009 6.0e-53 212.2 254 45.3
COL.COLO4_16967 Corchorus olitorius HOM05D005023 ORTHO05D006009 6.0e-53 212.2 249 46.2
TWI60G0688 Tripterygium wilfordii HOM05D005023 ORTHO05D006009 6.0e-53 212.2 275 43.3
Cpa.g.sc90.15 Carica papaya HOM05D005023 ORTHO05D006009 1.3e-52 211.1 257 44.4
Prupe.5G030700 Prunus persica HOM05D005023 ORTHO05D006009 1.3e-52 211.1 263 43.7
Lsat_1_v5_gn_6_80180 Lactuca sativa HOM05D005023 ORTHO05D006009 1.7e-52 210.7 274 41.2
PSO782G3892 Papaver somniferum HOM05D005023 ORTHO05D006009 3.0e-52 209.9 244 46.3
RcHm_v2.0_Chr7g0211361 Rosa chinensis HOM05D005023 ORTHO05D006009 3.0e-52 209.9 304 39.5
Phvul.009G009200 Phaseolus vulgaris HOM05D005023 ORTHO05D006009 3.9e-52 209.5 279 43.0
Thecc.03G307500 Theobroma cacao HOM05D005023 ORTHO05D006009 5.1e-52 209.1 243 47.3
PGR042G2438 Punica granatum HOM05D005023 ORTHO05D006009 8.6e-52 208.4 240 46.2
DCAR_031128 Daucus carota HOM05D005023 ORTHO05D006009 1.1e-51 208.0 258 43.4
FvH4_5g22760 Fragaria vesca HOM05D005023 ORTHO05D006009 1.1e-51 208.0 248 42.7
FAN18G3597 Fragaria x ananassa HOM05D005023 ORTHO05D006009 1.1e-51 208.0 248 42.7
GSVIVG01013101001 Vitis vinifera HOM05D005023 ORTHO05D006009 1.1e-51 208.0 247 45.7
FAN08G0704 Fragaria x ananassa HOM05D005023 ORTHO05D006009 1.9e-51 207.2 248 42.7
Duzib084G0965 Durio zibethinus HOM05D005023 ORTHO05D006009 3.3e-51 206.5 244 45.5
FAN13G2198 Fragaria x ananassa HOM05D005023 ORTHO05D006009 3.3e-51 206.5 248 42.7
FAN13G2978 Fragaria x ananassa HOM05D005023 ORTHO05D006009 3.3e-51 206.5 248 42.7
Atru.chr12.846 Acer truncatum HOM05D005023 ORTHO05D006009 5.6e-51 205.7 249 44.6
FAN18G4268 Fragaria x ananassa HOM05D005023 ORTHO05D006009 5.6e-51 205.7 248 42.3
Glyma.06G013600 Glycine max HOM05D005023 ORTHO05D006009 8.1e-50 201.8 246 43.9
Lj6g0028231 Lotus japonicus HOM05D005023 ORTHO05D006009 1.1e-49 201.4 246 43.9
Ca_22661_v3 Cicer arietinum L. HOM05D005023 ORTHO05D006009 1.8e-49 200.7 263 42.6
Lalb_Chr25g0286701 Lupinus albus HOM05D005023 ORTHO05D006009 3.1e-49 199.9 245 43.7
Hund11209 Selenicereus undatus HOM05D005023 ORTHO05D006009 4.0e-49 199.5 252 43.7
TPR.G14159 Trifolium pratense HOM05D005023 ORTHO05D006009 4.0e-49 199.5 252 44.8
Sabra01G0107600 Salix brachista HOM05D005023 ORTHO05D006009 6.8e-49 198.7 262 45.4
Aa31sc182G50 Aethionema arabicum HOM05D005023 ORTHO05D006009 1.5e-48 197.6 247 47.4
unitig_21.g20893 Utricularia gibba HOM05D005023 ORTHO05D004745 1.5e-48 197.6 237 46.0
Haze_08177 Corylus avellana HOM05D005023 ORTHO05D006009 2.6e-48 196.8 199 49.7
Carub.0008s0106 Capsella rubella HOM05D005023 ORTHO05D006009 4.4e-48 196.1 282 45.0
ECA240G3323 Erigeron canadensis HOM05D005023 ORTHO05D006009 4.4e-48 196.1 280 40.4
Psat4g122280 Pisum sativum HOM05D005023 ORTHO05D006009 7.6e-48 195.3 245 44.9
AL8G11450 Arabidopsis lyrata HOM05D005023 ORTHO05D006009 9.9e-48 194.9 248 48.0
Psat4g122680 Pisum sativum HOM05D005023 ORTHO05D006009 1.7e-47 194.1 224 45.1
Sp2g11650 Schrenkiella parvula HOM05D005023 ORTHO05D006009 1.7e-47 194.1 248 47.2
AT5G46850 Arabidopsis thaliana HOM05D005023 ORTHO05D006009 2.2e-47 193.7 249 45.8
Glyma.04G013700 Glycine max HOM05D005023 ORTHO05D006009 2.2e-47 193.7 267 41.9
Eucgr.E00250 Eucalyptus grandis HOM05D005023 ORTHO05D006009 3.7e-47 193.0 273 40.7
Medtr8g066330 Medicago truncatula HOM05D005023 ORTHO05D006009 3.7e-47 193.0 254 42.9
EL10Ac8g19220 Beta vulgaris HOM05D005023 ORTHO05D006009 8.3e-47 191.8 252 42.1
AUR62033976 Chenopodium quinoa HOM05D005023 ORTHO05D006009 1.4e-46 191.0 261 43.3
CANSAT54G0648 Cannabis sativa HOM05D005023 ORTHO05D006009 3.2e-46 189.9 255 40.8
CARHR174600 Cardamine hirsuta HOM05D005023 ORTHO05D006009 3.2e-46 189.9 248 44.8
ClCG04G001320 Citrullus lanatus HOM05D005023 ORTHO05D006009 5.4e-46 189.1 271 40.6
Sed0002054 Sechium edule HOM05D005023 ORTHO05D006009 1.2e-45 188.0 274 39.4
Sabra03G0064200 Salix brachista HOM05D005023 ORTHO05D006009 1.6e-45 187.6 217 46.1
FAN04G1126 Fragaria x ananassa HOM05D005023 ORTHO05D006009 2.7e-45 186.8 191 48.2
Gohir.A12G206900 Gossypium hirsutum HOM05D005023 ORTHO05D006009 2.7e-45 186.8 287 40.1
Thhalv10000976m.g Eutrema salsugineum HOM05D005023 ORTHO05D006009 3.5e-45 186.4 280 42.9
arahy.Tifrunner.gnm1.ann1.NK2KWA Arachis hypogaea HOM05D005023 ORTHO05D006009 4.6e-45 186.0 246 40.7
arahy.Tifrunner.gnm1.ann1.6CH5L4 Arachis hypogaea HOM05D005023 ORTHO05D006009 6.0e-45 185.7 246 40.7
HanXRQChr03g0083581 Helianthus annuus HOM05D005023 ORTHO05D006009 7.8e-45 185.3 238 39.9
THA.LOC104806696 Tarenaya hassleriana HOM05D005023 ORTHO05D006009 7.8e-45 185.3 246 44.3
Gohir.D12G209350 Gossypium hirsutum HOM05D005023 ORTHO05D006009 1.3e-44 184.5 278 39.9
arahy.Tifrunner.gnm1.ann1.J93PEP Arachis hypogaea HOM05D005023 ORTHO05D006009 1.7e-44 184.1 248 40.3
BraA06t27429Z Brassica rapa HOM05D005023 ORTHO05D006009 2.3e-44 183.7 244 44.7
CsaV3_1G033210 Cucumis sativus L. HOM05D000021 ORTHO05D000010 3.0e-44 183.3 290 37.6
A06p45570 Brassica napus HOM05D005023 ORTHO05D006009 3.9e-44 183.0 275 42.5
Gorai.008G224900 Gossypium raimondii HOM05D005023 ORTHO05D006009 5.1e-44 182.6 280 40.4
MBI02_g28332_MAGBIO Magnolia biondii HOM05D005023 ORTHO05D006009 5.1e-44 182.6 247 41.3
BcaC06g31439 Brassica carinata HOM05D005023 ORTHO05D006009 2.5e-43 180.3 244 43.9
BcaC06g34337 Brassica carinata HOM05D005023 ORTHO05D006009 1.2e-42 177.9 277 42.2
C07p30210 Brassica napus HOM05D005023 ORTHO05D006009 1.2e-42 177.9 277 42.2
BolC7t43557H Brassica oleracea HOM05D005023 ORTHO05D006009 1.2e-42 177.9 277 42.6
Ah.12g065340 Amaranthus hybridus HOM05D005023 ORTHO05D006009 2.8e-42 176.8 247 42.5
PSO063G5178 Papaver somniferum HOM05D005023 ORTHO05D006009 4.4e-40 169.5 166 52.4
SHI20240 Sapria himalayana HOM05D000452 ORTHO05D000647 4.4e-40 169.5 247 41.7
SalBow6G7173 Salvia bowleyana HOM05D005023 ORTHO05D006009 7.6e-40 168.7 81 97.5
Hma1.2p1_1594F.1_g292650 Hydrangea macrophylla HOM05D005023 ORTHO05D006009 1.7e-39 167.5 163 52.8
Nn7g38116 Nelumbo nucifera HOM05D005023 ORTHO05D006009 1.4e-38 164.5 244 36.1
TPR.G3350 Trifolium pratense HOM05D005023 ORTHO05D006009 2.1e-37 160.6 189 45.5
CDE02G4581 Ceratophyllum demersum HOM05D005023 ORTHO05D006009 2.7e-37 160.2 260 37.7
Hma1.2p1_2161F.1_g315630 Hydrangea macrophylla HOM05D005023 ORTHO05D006009 3.9e-36 156.4 182 46.2
Sc01g0007280 Simmondsia chinensis HOM05D005023 ORTHO05D006009 1.9e-35 154.1 244 36.5
arahy.Tifrunner.gnm1.ann1.GAHP45 Arachis hypogaea HOM05D005023 ORTHO05D006009 1.4e-33 147.9 242 35.5
Zm00001eb030880 Zea mays HOM05D005023 ORTHO05D006009 2.4e-33 147.1 216 41.7
ATR0580G166 Amborella trichopoda HOM05D005237 ORTHO05D006189 9.0e-33 145.2 192 42.2
Os12g0596900 Oryza sativa ssp. japonica HOM05D005023 ORTHO05D006009 4.4e-32 142.9 246 37.4
MELO3C033076.2 Cucumis melo HOM05D005023 ORTHO05D006009 9.9e-32 141.7 235 36.6
Solyc08g076550.3 Solanum lycopersicum HOM05D005023 ORTHO05D006009 1.7e-31 141.0 137 50.4
HPP92_014897 Vanilla planifolia HOM05D005023 ORTHO05D006009 6.4e-31 139.0 240 37.5
HPP92_014902 Vanilla planifolia HOM05D005023 ORTHO05D006009 6.4e-31 139.0 239 38.1
Actinidia09177 Actinidia chinensis HOM05D005023 ORTHO05D006009 1.7e-28 131.0 244 34.4
Hma1.2p1_0572F.1_g181170 Hydrangea macrophylla HOM05D005023 ORTHO05D006009 1.1e-25 121.7 125 52.0
SalBow6G3463 Salvia bowleyana HOM05D005023 ORTHO05D006009 4.6e-21 106.3 57 89.5
Mapoly0088s0063 Marchantia polymorpha HOM05D005023 ORTHO05D006009 1.0e-20 105.1 202 31.7
SMO358G0075 Selaginella moellendorffii HOM05D005023 ORTHO05D006009 2.3e-20 104.0 211 30.8
TAR375G0008 Trochodendron aralioides HOM05D005023 ORTHO05D006009 2.1e-18 97.4 157 38.2
MELO3C011047.2 Cucumis melo HOM05D005023 ORTHO05D006009 5.3e-17 92.8 96 47.9
Pp3c13_7870 Physcomitrium patens HOM05D005023 ORTHO05D006009 9.0e-17 92.0 211 27.5
AagrBONN_evm.TU.Sc2ySwM_344.1294 Anthoceros agrestis HOM05D005023 ORTHO05D006009 2.5e-11 73.9 147 33.3
CSS0036970 Camellia sinensis var. sinensis HOM05D005023 ORTHO05D006009 5.8e-08 62.8 83 43.4
SalBow4G2690 Salvia bowleyana HOM05D003965 ORTHO05D009845 1.1e-06 58.5 29 96.6
SalBow4G2960 Salvia bowleyana HOM05D003965 ORTHO05D357534 1.1e-06 58.5 29 96.6
SalBow8G2256 Salvia bowleyana HOM05D003965 ORTHO05D357552 1.1e-06 58.5 29 96.6
SalBow7G3739 Salvia bowleyana HOM05D003965 ORTHO05D356729 2.5e-06 57.4 38 73.7
SalBow1G0602 Salvia bowleyana HOM05D003965 ORTHO05D353312 4.2e-06 56.6 29 93.1
SalBow1G3693 Salvia bowleyana HOM05D003965 ORTHO05D354129 4.2e-06 56.6 29 93.1
SalBow1G5368 Salvia bowleyana HOM05D003965 ORTHO05D009845 4.2e-06 56.6 29 93.1
SalBow1G6769 Salvia bowleyana HOM05D003965 ORTHO05D353447 4.2e-06 56.6 29 93.1
SalBow6G2698 Salvia bowleyana HOM05D003965 ORTHO05D362587 4.2e-06 56.6 29 93.1
SalBow6G5353 Salvia bowleyana HOM05D003965 ORTHO05D353002 4.2e-06 56.6 29 93.1
SalBow6G6335 Salvia bowleyana HOM05D003965 ORTHO05D009845 4.2e-06 56.6 29 93.1
SalBow7G0711 Salvia bowleyana HOM05D003965 ORTHO05D004966 4.2e-06 56.6 29 93.1
SalBow7G2926 Salvia bowleyana HOM05D003965 ORTHO05D355356 4.2e-06 56.6 29 93.1
SalBow1G1313 Salvia bowleyana HOM05D003965 ORTHO05D351861 5.5e-06 56.2 31 83.9
SalBow1G5347 Salvia bowleyana HOM05D003965 ORTHO05D359372 9.3e-06 55.5 31 83.9
SalBow7G2257 Salvia bowleyana HOM05D003965 ORTHO05D352642 9.3e-06 55.5 31 87.1


User provided reference genes

Program Settings