Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G3501 Salvia bowleyana HOM05D005957 ORTHO05D007318 1.6e-55 219.2 106 100.0
Nitab4.5_0000002g0080 Nicotiana tabacum HOM05D005957 ORTHO05D007318 1.1e-32 143.3 104 68.3
Hma1.2p1_0119F.1_g056870 Hydrangea macrophylla HOM05D005957 ORTHO05D007318 3.2e-32 141.7 105 69.5
Peaxi162Scf01692g00003 Petunia axillaris HOM05D005957 ORTHO05D007318 3.2e-32 141.7 106 67.9
Nitab4.5_0007927g0010 Nicotiana tabacum HOM05D005957 ORTHO05D007318 9.2e-32 140.2 106 66.0
Lsat_1_v5_gn_0_40840 Lactuca sativa HOM05D005957 ORTHO05D007318 1.2e-31 139.8 108 66.7
ECA236G1285 Erigeron canadensis HOM05D005957 ORTHO05D007318 2.7e-31 138.7 110 65.5
Cfa011817 Carpinus fangiana HOM05D005957 ORTHO05D007318 5.9e-31 137.5 107 66.4
Haze_24453 Corylus avellana HOM05D005957 ORTHO05D007318 7.8e-31 137.1 107 66.4
HanXRQChr01g0028631 Helianthus annuus HOM05D005957 ORTHO05D007318 1.3e-30 136.3 105 64.8
CSS0038993 Camellia sinensis var. sinensis HOM05D005957 ORTHO05D007318 5.0e-30 134.4 105 66.7
COL.COLO4_11196 Corchorus olitorius HOM05D005957 ORTHO05D007318 8.6e-30 133.7 108 66.7
HanXRQChr17g0565391 Helianthus annuus HOM05D005957 ORTHO05D007318 8.6e-30 133.7 105 61.0
Potri.013G155300 Populus trichocarpa HOM05D005957 ORTHO05D007318 1.5e-29 132.9 104 65.4
Sabra13G0125100 Salix brachista HOM05D005957 ORTHO05D007318 1.5e-29 132.9 104 63.5
Solyc01g090870.1 Solanum lycopersicum HOM05D005957 ORTHO05D007318 1.5e-29 132.9 107 62.6
Sopen01g036610 Solanum pennellii HOM05D005957 ORTHO05D007318 1.5e-29 132.9 107 62.6
PGSC0003DMG400046061 Solanum tuberosum HOM05D005957 ORTHO05D007318 1.5e-29 132.9 107 63.6
Cc01_g15210 Coffea canephora HOM05D005957 ORTHO05D007318 2.5e-29 132.1 107 65.4
Peaxi162Scf00390g00049 Petunia axillaris HOM05D005957 ORTHO05D007318 4.3e-29 131.3 104 63.5
QL01p025125 Quercus lobata HOM05D005957 ORTHO05D007318 5.6e-29 131.0 105 62.9
Thecc.09G362300 Theobroma cacao HOM05D005957 ORTHO05D007318 1.2e-28 129.8 106 64.2
FAN25G1085 Fragaria x ananassa HOM05D005957 ORTHO05D007318 2.8e-28 128.6 106 59.4
Solyc06g082450.1 Solanum lycopersicum HOM05D005957 ORTHO05D007318 2.8e-28 128.6 102 64.7
CAN.G1872.4 Capsicum annuum HOM05D005957 ORTHO05D007318 3.6e-28 128.3 108 61.1
FAN21G1009 Fragaria x ananassa HOM05D005957 ORTHO05D007318 3.6e-28 128.3 106 59.4
FvH4_3g40300 Fragaria vesca HOM05D005957 ORTHO05D007318 6.2e-28 127.5 106 58.5
FAN11G2330 Fragaria x ananassa HOM05D005957 ORTHO05D007318 6.2e-28 127.5 106 58.5
FAN16G3236 Fragaria x ananassa HOM05D005957 ORTHO05D007318 6.2e-28 127.5 106 58.5
Oeu064677.1 Olea europaea HOM05D005957 ORTHO05D007318 6.2e-28 127.5 105 61.9
Dinv04837 Davidia involucrata HOM05D005957 ORTHO05D007318 8.0e-28 127.1 102 63.7
SGA_v2.0_scaffold77G25368 Striga asiatica HOM05D005957 ORTHO05D007318 8.0e-28 127.1 105 61.0
Duzib168G0649 Durio zibethinus HOM05D005957 ORTHO05D007318 1.0e-27 126.7 106 62.3
TWI79G1455 Tripterygium wilfordii HOM05D005957 ORTHO05D007318 1.0e-27 126.7 104 64.4
Manes.18G139500 Manihot esculenta HOM05D005957 ORTHO05D007318 1.8e-27 125.9 110 63.6
RcHm_v2.0_Chr5g0072641 Rosa chinensis HOM05D005957 ORTHO05D007318 2.3e-27 125.6 103 60.2
Atru.chr1.2524 Acer truncatum HOM05D005957 ORTHO05D007318 3.1e-27 125.2 109 60.6
CiPaw.14G051700 Carya illinoinensis HOM05D005957 ORTHO05D007318 4.0e-27 124.8 109 59.6
Sopen06g033830 Solanum pennellii HOM05D005957 ORTHO05D007318 4.0e-27 124.8 97 66.0
GSVIVG01024580001 Vitis vinifera HOM05D005957 ORTHO05D007318 4.0e-27 124.8 106 62.3
Potri.019G128400 Populus trichocarpa HOM05D005957 ORTHO05D007318 5.2e-27 124.4 104 63.5
Sabra19G0126000 Salix brachista HOM05D005957 ORTHO05D007318 6.8e-27 124.0 104 62.5
MSTRG.17909 Avicennia marina HOM05D005957 ORTHO05D007318 8.9e-27 123.6 106 58.5
Nitab4.5_0002091g0020 Nicotiana tabacum HOM05D005957 ORTHO05D007318 1.2e-26 123.2 104 59.6
Migut.D00827 Erythranthe guttata HOM05D005957 ORTHO05D007318 1.5e-26 122.9 106 60.4
CANSAT54G0691 Cannabis sativa HOM05D005957 ORTHO05D007318 4.4e-26 121.3 109 57.8
Ah.08g217120 Amaranthus hybridus HOM05D005957 ORTHO05D007318 7.5e-26 120.6 96 58.3
Cpa.g.sc2.317 Carica papaya HOM05D005957 ORTHO05D007318 7.5e-26 120.6 105 61.9
Migut.N00743 Erythranthe guttata HOM05D005957 ORTHO05D007318 7.5e-26 120.6 109 61.5
TAR623G0423 Trochodendron aralioides HOM05D005957 ORTHO05D007318 9.8e-26 120.2 105 62.9
Aqoxy2G00718 Aquilegia oxysepala HOM05D005957 ORTHO05D007318 1.7e-25 119.4 83 66.3
CiPaw.13G065100 Carya illinoinensis HOM05D005957 ORTHO05D007318 2.2e-25 119.0 105 61.9
Prupe.6G042800 Prunus persica HOM05D005957 ORTHO05D007318 2.2e-25 119.0 107 57.9
Psat2g052120 Pisum sativum HOM05D005957 ORTHO05D007318 2.9e-25 118.6 88 63.6
Gohir.D05G134050 Gossypium hirsutum HOM05D005957 ORTHO05D007318 6.4e-25 117.5 109 57.8
LjContig00141g0008224 Lotus japonicus HOM05D005957 ORTHO05D007318 6.4e-25 117.5 86 65.1
Gohir.A05G129400 Gossypium hirsutum HOM05D005957 ORTHO05D007318 8.3e-25 117.1 109 57.8
MD03G1053700 Malus domestica HOM05D005957 ORTHO05D007318 8.3e-25 117.1 106 56.6
MD11G1055300 Malus domestica HOM05D005957 ORTHO05D007318 8.3e-25 117.1 107 57.0
Gorai.009G137600 Gossypium raimondii HOM05D005957 ORTHO05D007318 1.1e-24 116.7 109 57.8
Oeu011373.1 Olea europaea HOM05D005957 ORTHO05D007318 1.1e-24 116.7 102 59.8
Rhsim13G0060900 Rhododendron simsii HOM05D005957 ORTHO05D007318 3.2e-24 115.2 104 61.5
vmacro02888 Vaccinium macrocarpon HOM05D005957 ORTHO05D007318 5.4e-24 114.4 104 61.5
Lalb_Chr17g0345591 Lupinus albus HOM05D005957 ORTHO05D007318 7.0e-24 114.0 103 58.3
TPR.G25771 Trifolium pratense HOM05D005957 ORTHO05D007318 2.0e-23 112.5 88 61.4
Ciclev10003853m.g Citrus clementina HOM05D005957 ORTHO05D007318 3.5e-23 111.7 81 64.2
Glyma.14G203500 Glycine max HOM05D005957 ORTHO05D007318 3.5e-23 111.7 84 67.9
ClCG02G019100 Citrullus lanatus HOM05D005957 ORTHO05D007318 4.6e-23 111.3 89 62.9
CsaV3_6G019090 Cucumis sativus L. HOM05D005957 ORTHO05D007318 4.6e-23 111.3 114 54.4
Glyma.02G235500 Glycine max HOM05D005957 ORTHO05D007318 4.6e-23 111.3 83 68.7
MBI03_g02190_MAGBIO Magnolia biondii HOM05D005957 ORTHO05D007318 4.6e-23 111.3 86 62.8
Sed0019639 Sechium edule HOM05D005957 ORTHO05D007318 6.0e-23 110.9 108 55.6
EL10Ac7g16454 Beta vulgaris HOM05D005957 ORTHO05D007318 7.8e-23 110.5 89 59.6
Dinv28722 Davidia involucrata HOM05D005957 ORTHO05D007318 7.8e-23 110.5 90 64.4
Nitab4.5_0002759g0020 Nicotiana tabacum HOM05D005957 ORTHO05D007318 7.8e-23 110.5 100 58.0
Phvul.006G076900 Phaseolus vulgaris HOM05D005957 ORTHO05D007318 7.8e-23 110.5 84 59.5
Ca_05700_v3 Cicer arietinum L. HOM05D005957 ORTHO05D007318 1.0e-22 110.2 89 59.6
Ca_30026_v3 Cicer arietinum L. HOM05D005957 ORTHO05D007318 1.0e-22 110.2 89 59.6
Medtr5g075190 Medicago truncatula HOM05D005957 ORTHO05D007318 1.0e-22 110.2 88 61.4
ATR0681G143 Amborella trichopoda HOM05D005957 ORTHO05D007318 1.3e-22 109.8 103 58.3
VMungo0647G0754 Vigna mungo HOM05D005957 ORTHO05D007318 2.3e-22 109.0 84 65.5
Nn5g26879 Nelumbo nucifera HOM05D005957 ORTHO05D007318 3.9e-22 108.2 86 64.0
PSO017G7297 Papaver somniferum HOM05D005957 ORTHO05D007318 5.0e-22 107.8 98 58.2
PSO170G5428 Papaver somniferum HOM05D005957 ORTHO05D007318 8.6e-22 107.1 98 58.2
MELO3C026874.2 Cucumis melo HOM05D005957 ORTHO05D007318 1.1e-21 106.7 88 61.4
Os07g0679100 Oryza sativa ssp. japonica HOM05D005957 ORTHO05D007318 1.5e-21 106.3 102 59.8
Phvul.008G248400 Phaseolus vulgaris HOM05D005957 ORTHO05D007318 1.5e-21 106.3 84 64.3
Eucgr.J01842 Eucalyptus grandis HOM05D005957 ORTHO05D007318 1.9e-21 105.9 105 57.1
Sc21g0004870 Simmondsia chinensis HOM05D005957 ORTHO05D007318 3.3e-21 105.1 96 52.1
PGR119G2032 Punica granatum HOM05D005957 ORTHO05D007318 4.3e-21 104.8 98 56.1
Carub.0004s1155 Capsella rubella HOM05D005957 ORTHO05D007318 1.2e-20 103.2 97 55.7
Aa31LG5G6330 Aethionema arabicum HOM05D005957 ORTHO05D007318 1.6e-20 102.8 97 53.6
AL4G25260 Arabidopsis lyrata HOM05D005957 ORTHO05D007318 3.6e-20 101.7 96 55.2
AT2G30395 Arabidopsis thaliana HOM05D005957 ORTHO05D007318 3.6e-20 101.7 96 55.2
CARHR123750 Cardamine hirsuta HOM05D005957 ORTHO05D007318 6.2e-20 100.9 86 58.1
DCAR_023195 Daucus carota HOM05D005957 ORTHO05D007318 6.2e-20 100.9 126 45.2
BcaC02g11133 Brassica carinata HOM05D005957 ORTHO05D007318 1.4e-19 99.8 97 53.6
Dinv12270 Davidia involucrata HOM05D005957 ORTHO05D007318 1.8e-19 99.4 86 60.5
THA.LOC104800785 Tarenaya hassleriana HOM05D005957 ORTHO05D007318 2.3e-19 99.0 84 56.0
Zm00001eb350230 Zea mays HOM05D005957 ORTHO05D007318 2.3e-19 99.0 100 56.0
A05p15090 Brassica napus HOM05D005957 ORTHO05D007318 3.1e-19 98.6 97 52.6
BolC4t23551H Brassica oleracea HOM05D005957 ORTHO05D007318 3.1e-19 98.6 97 52.6
BcaB02g10322 Brassica carinata HOM05D005957 ORTHO05D007318 4.0e-19 98.2 64 68.8
C04p20120 Brassica napus HOM05D005957 ORTHO05D007318 4.0e-19 98.2 97 52.6
CARHR006600 Cardamine hirsuta HOM05D005957 ORTHO05D007318 5.2e-19 97.8 87 52.9
Thhalv10017867m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 5.2e-19 97.8 86 54.7
Sp4g12950 Schrenkiella parvula HOM05D005957 ORTHO05D007318 5.2e-19 97.8 97 51.5
Os05g0328300 Oryza sativa ssp. japonica HOM05D005957 ORTHO05D007318 6.8e-19 97.4 76 64.5
Ah.15g095100 Amaranthus hybridus HOM05D005957 ORTHO05D007318 5.8e-18 94.4 76 56.6
BcaB06g28364 Brassica carinata HOM05D005957 ORTHO05D007318 5.8e-18 94.4 86 51.2
BraA05t20430Z Brassica rapa HOM05D005957 ORTHO05D007318 9.8e-18 93.6 64 67.2
AT1G06923 Arabidopsis thaliana HOM05D005957 ORTHO05D007318 1.7e-17 92.8 67 59.7
Carub.0001s0622 Capsella rubella HOM05D005957 ORTHO05D007318 1.7e-17 92.8 66 60.6
BcaC02g08022 Brassica carinata HOM05D005957 ORTHO05D007318 2.9e-17 92.0 86 52.3
C04p59320 Brassica napus HOM05D005957 ORTHO05D007318 2.9e-17 92.0 86 52.3
BolC4t27440H Brassica oleracea HOM05D005957 ORTHO05D007318 2.9e-17 92.0 86 52.3
A04p23170 Brassica napus HOM05D005957 ORTHO05D007318 4.9e-17 91.3 86 52.3
Thhalv10017852m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 4.9e-17 91.3 86 53.5
BraA04t17844Z Brassica rapa HOM05D005957 ORTHO05D007318 6.4e-17 90.9 86 52.3
Thhalv10009633m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 6.4e-17 90.9 72 61.1
Sp1g05630 Schrenkiella parvula HOM05D005957 ORTHO05D007318 6.4e-17 90.9 67 58.2
BcaC07g42550 Brassica carinata HOM05D005957 ORTHO05D007318 1.4e-16 89.7 69 56.5
AL1G16950 Arabidopsis lyrata HOM05D005957 ORTHO05D007318 1.9e-16 89.4 67 58.2
A09p66670 Brassica napus HOM05D005957 ORTHO05D007318 1.6e-15 86.3 72 54.2
BraA09t42007Z Brassica rapa HOM05D005957 ORTHO05D007318 1.6e-15 86.3 72 54.2
AUR62007156 Chenopodium quinoa HOM05D003140 ORTHO05D003851 2.7e-15 85.5 86 50.0
Zm00001eb330630 Zea mays HOM05D005957 ORTHO05D007318 4.6e-15 84.7 62 66.1
BcaC07g42036 Brassica carinata HOM05D005957 ORTHO05D007318 7.8e-15 84.0 73 52.1
BcaC07g42037 Brassica carinata HOM05D005957 ORTHO05D007318 7.8e-15 84.0 73 52.1
C08p50900 Brassica napus HOM05D005957 ORTHO05D007318 7.8e-15 84.0 73 52.1
BolC8t52618H Brassica oleracea HOM05D005957 ORTHO05D007318 7.8e-15 84.0 73 52.1
SEGI_34718 Sequoiadendron giganteum HOM05D005957 ORTHO05D007318 4.1e-08 61.6 60 46.7


User provided reference genes

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