Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G3374 Salvia bowleyana HOM05D007328 ORTHO05D009246 7.4e-44 180.3 98 100.0
MSTRG.4340 Avicennia marina HOM05D007328 ORTHO05D009246 5.9e-33 144.1 95 83.2
SGA_v2.0_scaffold7G04170 Striga asiatica HOM05D007328 ORTHO05D009246 2.2e-32 142.1 96 80.2
Migut.D02033 Erythranthe guttata HOM05D007328 ORTHO05D009246 6.5e-32 140.6 95 80.0
CSS0000986 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 1.5e-25 119.4 96 69.8
CANSAT80G1532 Cannabis sativa HOM05D007328 ORTHO05D009246 1.5e-25 119.4 96 68.8
Sc04g0001180 Simmondsia chinensis HOM05D007328 ORTHO05D009246 1.5e-25 119.4 96 69.8
Nitab4.5_0003542g0010 Nicotiana tabacum HOM05D007328 ORTHO05D009246 3.5e-25 118.2 96 69.8
unitig_62.g23226 Utricularia gibba HOM05D007328 ORTHO05D009246 3.5e-25 118.2 98 69.4
Dinv38499 Davidia involucrata HOM05D007328 ORTHO05D009246 4.5e-25 117.9 96 68.8
PGSC0003DMG400015227 Solanum tuberosum HOM05D007328 ORTHO05D009246 1.0e-24 116.7 96 69.8
CAN.G126.95 Capsicum annuum HOM05D007328 ORTHO05D009246 1.3e-24 116.3 96 69.8
Nitab4.5_0000510g0070 Nicotiana tabacum HOM05D007328 ORTHO05D009246 1.7e-24 115.9 96 68.8
PSO063G4259 Papaver somniferum HOM05D007328 ORTHO05D009246 1.7e-24 115.9 97 63.9
Solyc03g111790.4 Solanum lycopersicum HOM05D007328 ORTHO05D009246 2.2e-24 115.5 96 68.8
Sopen03g030890 Solanum pennellii HOM05D007328 ORTHO05D009246 2.2e-24 115.5 96 68.8
TAR629G2292 Trochodendron aralioides HOM05D007328 ORTHO05D009246 2.9e-24 115.2 96 65.6
PGR044G2544 Punica granatum HOM05D007328 ORTHO05D009246 1.1e-23 113.2 97 62.9
Aqoxy5G03651 Aquilegia oxysepala HOM05D007328 ORTHO05D009246 1.5e-23 112.8 98 67.3
GSVIVG01007592001 Vitis vinifera HOM05D007328 ORTHO05D009246 2.5e-23 112.1 96 65.6
PSO067G0004 Papaver somniferum HOM05D007328 ORTHO05D009246 3.2e-23 111.7 96 62.5
Duzib205G1420 Durio zibethinus HOM05D007328 ORTHO05D009246 4.2e-23 111.3 100 60.0
CiPaw.12G033600 Carya illinoinensis HOM05D007328 ORTHO05D009246 9.4e-23 110.2 96 61.5
Gohir.A12G186600 Gossypium hirsutum HOM05D007328 ORTHO05D009246 9.4e-23 110.2 100 62.0
ECA246G4123 Erigeron canadensis HOM05D007328 ORTHO05D009246 2.1e-22 109.0 98 62.2
FAN04G3262 Fragaria x ananassa HOM05D007328 ORTHO05D009246 2.1e-22 109.0 100 62.0
Gohir.D12G189600 Gossypium hirsutum HOM05D007328 ORTHO05D009246 2.1e-22 109.0 100 61.0
Gorai.008G203400 Gossypium raimondii HOM05D007328 ORTHO05D009246 2.1e-22 109.0 100 61.0
Lsat_1_v5_gn_3_90700 Lactuca sativa HOM05D007328 ORTHO05D009246 2.1e-22 109.0 97 62.9
Ciclev10022963m.g Citrus clementina HOM05D007328 ORTHO05D009246 3.6e-22 108.2 101 63.4
Lsat_1_v5_gn_5_12821 Lactuca sativa HOM05D007328 ORTHO05D009246 3.6e-22 108.2 97 61.9
DCAR_007459 Daucus carota HOM05D007328 ORTHO05D009246 6.1e-22 107.5 98 62.2
FAN13G1360 Fragaria x ananassa HOM05D007328 ORTHO05D009246 8.0e-22 107.1 100 61.0
FvH4_5g06690 Fragaria vesca HOM05D007328 ORTHO05D009246 1.0e-21 106.7 100 61.0
Haze_07631 Corylus avellana HOM05D007328 ORTHO05D009246 1.4e-21 106.3 97 62.9
Potri.012G090600 Populus trichocarpa HOM05D007328 ORTHO05D009246 1.4e-21 106.3 96 59.4
Rhsim12G0170200 Rhododendron simsii HOM05D007328 ORTHO05D009246 1.4e-21 106.3 96 62.5
RcHm_v2.0_Chr7g0191941 Rosa chinensis HOM05D007328 ORTHO05D009246 1.4e-21 106.3 98 61.2
Hma1.2p1_2431F.1_g322030 Hydrangea macrophylla HOM05D007328 ORTHO05D009246 1.8e-21 105.9 100 61.0
QL10p005926 Quercus lobata HOM05D007328 ORTHO05D009246 1.8e-21 105.9 95 60.0
AT1G78790 Arabidopsis thaliana HOM05D007328 ORTHO05D009246 2.3e-21 105.5 96 62.5
Carub.0002s1493 Capsella rubella HOM05D007328 ORTHO05D009246 3.0e-21 105.1 96 62.5
FAN18G0524 Fragaria x ananassa HOM05D007328 ORTHO05D009246 3.0e-21 105.1 100 60.0
AL2G39190 Arabidopsis lyrata HOM05D007328 ORTHO05D009246 4.0e-21 104.8 96 62.5
Hund05612 Selenicereus undatus HOM05D007328 ORTHO05D009246 5.2e-21 104.4 97 58.8
Duzib068G0271 Durio zibethinus HOM05D007328 ORTHO05D009246 8.8e-21 103.6 98 56.1
TWI23G0848 Tripterygium wilfordii HOM05D007328 ORTHO05D009246 8.8e-21 103.6 96 61.5
arahy.Tifrunner.gnm1.ann1.RLPB8M Arachis hypogaea HOM05D007328 ORTHO05D009246 1.1e-20 103.2 95 63.2
arahy.Tifrunner.gnm1.ann1.VT7US1 Arachis hypogaea HOM05D007328 ORTHO05D009246 1.1e-20 103.2 95 63.2
CARHR072340 Cardamine hirsuta HOM05D007328 ORTHO05D009246 1.5e-20 102.8 96 62.5
Sp5g33820 Schrenkiella parvula HOM05D007328 ORTHO05D009246 1.5e-20 102.8 96 60.4
BcaB03g16036 Brassica carinata HOM05D004141 ORTHO05D005416 2.0e-20 102.4 96 60.4
Prupe.5G161600 Prunus persica HOM05D007328 ORTHO05D009246 2.0e-20 102.4 98 58.2
Ah.08g218420 Amaranthus hybridus HOM05D007328 ORTHO05D009246 2.6e-20 102.1 97 59.8
CsaV3_1G000900 Cucumis sativus L. HOM05D007328 ORTHO05D009246 2.6e-20 102.1 99 55.6
Sed0026647 Sechium edule HOM05D007328 ORTHO05D009246 3.3e-20 101.7 98 60.2
Cc04_g10870 Coffea canephora HOM05D007328 ORTHO05D009246 4.4e-20 101.3 96 60.4
COL.COLO4_19806 Corchorus olitorius HOM05D007328 ORTHO05D009246 4.4e-20 101.3 101 58.4
BcaC08g47455 Brassica carinata HOM05D007328 ORTHO05D009246 5.7e-20 100.9 96 59.4
A07p44000 Brassica napus HOM05D004141 ORTHO05D005416 5.7e-20 100.9 96 59.4
C06p52680 Brassica napus HOM05D004141 ORTHO05D005416 5.7e-20 100.9 96 59.4
BraA07t31907Z Brassica rapa HOM05D007328 ORTHO05D009246 5.7e-20 100.9 96 59.4
Os04g0481500 Oryza sativa ssp. japonica HOM05D007328 ORTHO05D009246 5.7e-20 100.9 98 58.2
Lj4g0027684 Lotus japonicus HOM05D007328 ORTHO05D009246 7.4e-20 100.5 96 58.3
ClCG06G017550 Citrullus lanatus HOM05D007328 ORTHO05D009246 9.7e-20 100.1 96 57.3
THA.LOC104809276 Tarenaya hassleriana HOM05D007328 ORTHO05D009246 9.7e-20 100.1 96 59.4
HPP92_017655 Vanilla planifolia HOM05D007328 ORTHO05D009246 1.3e-19 99.8 94 59.6
HanXRQChr08g0235201 Helianthus annuus HOM05D007328 ORTHO05D009246 2.2e-19 99.0 93 58.1
Thecc.03G118600 Theobroma cacao HOM05D007328 ORTHO05D009246 3.7e-19 98.2 101 53.5
Gorai.006G269700 Gossypium raimondii HOM05D007328 ORTHO05D009246 1.1e-18 96.7 100 54.0
Gohir.A09G244400 Gossypium hirsutum HOM05D007328 ORTHO05D009246 1.4e-18 96.3 100 54.0
Ca_19431_v3 Cicer arietinum L. HOM05D007328 ORTHO05D009246 3.1e-18 95.1 96 55.2
MELO3C026242.2 Cucumis melo HOM05D007328 ORTHO05D009246 4.1e-18 94.7 99 56.6
FAN08G2248 Fragaria x ananassa HOM05D007328 ORTHO05D009246 4.1e-18 94.7 117 52.1
AagrBONN_evm.TU.Sc2ySwM_369.482 Anthoceros agrestis HOM05D007328 ORTHO05D009246 9.1e-18 93.6 104 50.0
Gohir.D09G245301 Gossypium hirsutum HOM05D007328 ORTHO05D009246 9.1e-18 93.6 100 53.0
TPR.G37571 Trifolium pratense HOM05D007328 ORTHO05D009246 1.2e-17 93.2 98 54.1
Sabra12G0065400 Salix brachista HOM05D007328 ORTHO05D009246 2.0e-17 92.4 81 63.0
Pp3c15_7370 Physcomitrium patens HOM05D007328 ORTHO05D009246 2.6e-17 92.0 100 52.0
Medtr4g104430 Medicago truncatula HOM05D007328 ORTHO05D009246 4.5e-17 91.3 100 54.0
SHI17354 Sapria himalayana HOM05D007328 ORTHO05D009246 4.5e-17 91.3 95 54.7
Lalb_Chr07g0183141 Lupinus albus HOM05D007328 ORTHO05D009246 5.9e-17 90.9 95 55.8
Manes.06G112300 Manihot esculenta HOM05D007328 ORTHO05D009246 1.0e-16 90.1 67 73.1
Phvul.003G206900 Phaseolus vulgaris HOM05D007328 ORTHO05D009246 1.0e-16 90.1 99 51.5
vmacro16689 Vaccinium macrocarpon HOM05D007328 ORTHO05D009246 1.7e-16 89.4 67 70.1
Glyma.05G043400 Glycine max HOM05D007328 ORTHO05D009246 2.9e-16 88.6 96 52.1
Psat4g062040 Pisum sativum HOM05D007328 ORTHO05D009246 3.8e-16 88.2 87 58.6
Glyma.17G125900 Glycine max HOM05D007328 ORTHO05D009246 6.5e-16 87.4 96 51.0
CDE02G4603 Ceratophyllum demersum HOM05D007328 ORTHO05D009246 8.5e-16 87.0 107 50.5
Aa31LG4G2240 Aethionema arabicum HOM05D007328 ORTHO05D009246 1.1e-15 86.7 62 75.8
BolC6t40286H Brassica oleracea HOM05D007328 ORTHO05D009246 1.1e-15 86.7 69 68.1
CSS0030634 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 1.5e-15 86.3 96 56.2
C03p92780 Brassica napus HOM05D007328 ORTHO05D009246 3.2e-15 85.1 69 66.7
SEGI_23865 Sequoiadendron giganteum HOM05D007328 ORTHO05D009246 3.2e-15 85.1 73 63.0
Ca_30674_v3 Cicer arietinum L. HOM05D007328 ORTHO05D009246 7.2e-15 84.0 67 64.2
MBI10_g15972_MAGBIO Magnolia biondii HOM05D007328 ORTHO05D009246 9.4e-15 83.6 52 82.7
Mapoly0166s0013 Marchantia polymorpha HOM05D007328 ORTHO05D009246 6.1e-14 80.9 68 63.2
QL10p005934 Quercus lobata HOM05D007328 ORTHO05D009246 6.1e-14 80.9 64 64.1
ATR0199G045 Amborella trichopoda HOM05D007328 ORTHO05D009246 3.0e-13 78.6 50 84.0
AUR62001234 Chenopodium quinoa HOM05D007328 ORTHO05D009246 3.0e-13 78.6 60 70.0
Thhalv10019789m.g Eutrema salsugineum HOM05D007328 ORTHO05D009246 5.2e-13 77.8 52 80.8
Actinidia08840 Actinidia chinensis HOM05D007328 ORTHO05D009246 1.2e-12 76.6 56 75.0
Atru.chr9.1808 Acer truncatum HOM05D007328 ORTHO05D009246 2.6e-12 75.5 82 61.0
ECA233G5563 Erigeron canadensis HOM05D000006 ORTHO05D000001 6.3e-11 70.9 95 51.6
SMO203G0244 Selaginella moellendorffii HOM05D007328 ORTHO05D009246 5.4e-10 67.8 52 67.3
Nn3g16640 Nelumbo nucifera HOM05D007328 ORTHO05D009246 1.0e-08 63.5 62 53.2
CSS0039715 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 2.5e-07 58.9 39 76.9


User provided reference genes

Program Settings