Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G2419 Salvia bowleyana HOM05D007678 ORTHO05D009658 2.6e-144 515.4 264 100.0
Migut.J01589 Erythranthe guttata HOM05D007678 ORTHO05D009658 6.3e-90 334.7 255 68.2
Oeu044217.3 Olea europaea HOM05D007678 ORTHO05D009658 7.3e-78 294.7 259 61.0
Potri.001G033500 Populus trichocarpa HOM05D007678 ORTHO05D009658 2.4e-73 279.6 247 59.9
TAR623G0324 Trochodendron aralioides HOM05D007678 ORTHO05D009658 4.1e-73 278.9 242 59.1
Dinv31528 Davidia involucrata HOM05D007678 ORTHO05D009658 2.7e-72 276.2 216 64.8
Atru.chr2.1713_Atru.chr2.1714 Acer truncatum HOM05D007678 ORTHO05D009658 1.7e-71 273.5 248 57.7
MD02G1272300 Malus domestica HOM05D007678 ORTHO05D009658 1.7e-71 273.5 210 66.7
Duzib106G1843 Durio zibethinus HOM05D007678 ORTHO05D009658 2.3e-71 273.1 226 62.8
Actinidia01693 Actinidia chinensis HOM05D007678 ORTHO05D009658 1.1e-70 270.8 226 63.3
Prupe.2G048500 Prunus persica HOM05D007678 ORTHO05D009658 4.3e-70 268.9 210 66.2
Sopen10g031780 Solanum pennellii HOM05D007678 ORTHO05D009658 4.3e-70 268.9 236 58.5
PGSC0003DMG401028118 Solanum tuberosum HOM05D007678 ORTHO05D009658 9.5e-70 267.7 215 62.8
unitig_37.g12769 Utricularia gibba HOM05D007678 ORTHO05D009658 1.6e-69 266.9 250 60.0
Solyc10g081280.2 Solanum lycopersicum HOM05D007678 ORTHO05D009658 2.1e-69 266.5 225 60.4
Thecc.10G137600 Theobroma cacao HOM05D007678 ORTHO05D009658 2.1e-69 266.5 234 59.8
Medtr7g009670 Medicago truncatula HOM05D007678 ORTHO05D009658 2.8e-69 266.2 232 61.2
Lj1g0010481 Lotus japonicus HOM05D007678 ORTHO05D009658 3.6e-69 265.8 211 64.0
Nn7g37012 Nelumbo nucifera HOM05D007678 ORTHO05D009658 1.4e-68 263.8 223 60.1
Ca_04109_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 6.8e-68 261.5 237 59.1
Ca_04118_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 6.8e-68 261.5 237 59.1
Psat3g196520 Pisum sativum HOM05D007678 ORTHO05D009658 6.8e-68 261.5 213 63.8
QL04p021923 Quercus lobata HOM05D007678 ORTHO05D009658 2.0e-67 260.0 209 65.1
ECA248G0545 Erigeron canadensis HOM05D007678 ORTHO05D009658 2.6e-67 259.6 214 60.7
Gorai.011G222500 Gossypium raimondii HOM05D007678 ORTHO05D009658 3.4e-67 259.2 204 63.2
Glyma.09G240200 Glycine max HOM05D007678 ORTHO05D009658 4.4e-67 258.8 231 60.6
Gohir.D10G198600 Gossypium hirsutum HOM05D007678 ORTHO05D009658 4.4e-67 258.8 204 63.7
Ah.12g064780 Amaranthus hybridus HOM05D007678 ORTHO05D009658 5.8e-67 258.5 229 58.5
HanXRQChr12g0376111 Helianthus annuus HOM05D007678 ORTHO05D009658 9.8e-67 257.7 220 62.7
Lalb_Chr17g0337231 Lupinus albus HOM05D007678 ORTHO05D009658 1.3e-66 257.3 210 63.8
TWI38G1059 Tripterygium wilfordii HOM05D007678 ORTHO05D009658 2.2e-66 256.5 237 56.1
MELO3C034052.2 Cucumis melo HOM05D007678 ORTHO05D009658 8.3e-66 254.6 258 53.1
RcHm_v2.0_Chr1g0328821 Rosa chinensis HOM05D007678 ORTHO05D009658 1.9e-65 253.4 213 61.5
FvH4_7g04260 Fragaria vesca HOM05D007678 ORTHO05D009658 3.2e-65 252.7 214 63.1
Sed0019894 Sechium edule HOM05D000001 ORTHO05D000003 3.2e-65 252.7 236 55.9
Haze_02966 Corylus avellana HOM05D007678 ORTHO05D009658 5.4e-65 251.9 242 55.8
FAN10G0661 Fragaria x ananassa HOM05D007678 ORTHO05D009658 5.4e-65 251.9 214 62.6
PGR031G1114 Punica granatum HOM05D007678 ORTHO05D009658 4.6e-64 248.8 244 54.9
Manes.04G155050 Manihot esculenta HOM05D007678 ORTHO05D009658 3.9e-63 245.7 293 50.5
Peaxi162Scf00153g00057 Petunia axillaris HOM05D007678 ORTHO05D009658 3.9e-63 245.7 194 64.9
ATR0307G037 Amborella trichopoda HOM05D007678 ORTHO05D009658 1.5e-62 243.8 226 55.8
Sabra01G0023800 Salix brachista HOM05D007678 ORTHO05D009658 1.5e-62 243.8 264 52.7
Lsat_1_v5_gn_7_114920 Lactuca sativa HOM05D007678 ORTHO05D009658 5.6e-62 241.9 227 58.1
DCAR_001914 Daucus carota HOM05D007678 ORTHO05D009658 1.6e-61 240.4 229 56.8
Sc10g0003150 Simmondsia chinensis HOM05D007678 ORTHO05D009658 6.2e-61 238.4 246 53.3
COL.COLO4_04659 Corchorus olitorius HOM05D007678 ORTHO05D009658 2.3e-60 236.5 235 56.2
MBI13_g30074_MAGBIO Magnolia biondii HOM05D007678 ORTHO05D009658 2.3e-60 236.5 232 56.9
arahy.Tifrunner.gnm1.ann1.EB95VJ Arachis hypogaea HOM05D007678 ORTHO05D009658 4.0e-60 235.7 219 58.4
CAN.G128.118 Capsicum annuum HOM05D001269 ORTHO05D001083 6.8e-60 235.0 189 64.6
Gohir.A10G190900 Gossypium hirsutum HOM05D007678 ORTHO05D009658 6.8e-60 235.0 191 61.8
Nitab4.5_0008005g0010 Nicotiana tabacum HOM05D007678 ORTHO05D009658 3.4e-59 232.6 181 65.7
QL04p022035 Quercus lobata HOM05D007678 ORTHO05D009658 5.8e-59 231.9 193 62.2
Nitab4.5_0000062g0570 Nicotiana tabacum HOM05D007678 ORTHO05D009658 1.9e-57 226.9 192 62.5
Hund13420 Selenicereus undatus HOM05D007678 ORTHO05D009658 7.1e-57 224.9 218 57.3
EL10Ac2g02701 Beta vulgaris HOM05D007678 ORTHO05D009658 1.2e-56 224.2 211 57.3
vmacro20847 Vaccinium macrocarpon HOM05D007678 ORTHO05D009658 1.6e-56 223.8 250 51.6
HPP92_018248 Vanilla planifolia HOM05D007678 ORTHO05D009658 2.1e-56 223.4 223 51.6
CDE09G0612 Ceratophyllum demersum HOM05D007678 ORTHO05D009658 3.0e-55 219.5 209 56.9
Eucgr.G03196 Eucalyptus grandis HOM05D007678 ORTHO05D009658 3.9e-55 219.2 248 52.4
Zm00001eb303400 Zea mays HOM05D007678 ORTHO05D009658 1.6e-53 213.8 207 53.1
CsaV3_5G029470 Cucumis sativus L. HOM05D007678 ORTHO05D000003 4.7e-53 212.2 209 54.5
FAN06G1516 Fragaria x ananassa HOM05D007678 ORTHO05D009658 8.1e-53 211.5 243 53.1
AUR62031676 Chenopodium quinoa HOM05D007678 ORTHO05D009658 1.5e-51 207.2 170 61.8
Mapoly0003s0067 Marchantia polymorpha HOM05D007678 ORTHO05D009658 7.1e-49 198.4 238 42.9
CiPaw.14G011000 Carya illinoinensis HOM05D007678 ORTHO05D009658 1.6e-48 197.2 191 55.5
Glyma.18G256300 Glycine max HOM05D007678 ORTHO05D009658 2.7e-48 196.4 214 53.3
CBR_g30334 Chara braunii HOM05D007678 ORTHO05D009658 5.1e-47 192.2 211 47.9
Pp3c18_7980 Physcomitrium patens HOM05D007678 ORTHO05D009658 3.3e-46 189.5 205 46.3
Rhsim01G0121700 Rhododendron simsii HOM05D007678 ORTHO05D009658 4.0e-44 182.6 146 62.3
VMungo1383G0210 Vigna mungo HOM05D000430 ORTHO05D009658 2.9e-42 176.4 153 58.8
Cc06_g20600 Coffea canephora HOM05D007678 ORTHO05D009658 4.9e-42 175.6 166 62.7
SMO174G0167 Selaginella moellendorffii HOM05D007678 ORTHO05D009658 1.2e-40 171.0 192 46.4
arahy.Tifrunner.gnm1.ann1.L3S1G4 Arachis hypogaea HOM05D007678 ORTHO05D009658 3.6e-37 159.5 212 45.3
TPR.G4277 Trifolium pratense HOM05D007678 ORTHO05D009658 6.4e-34 148.7 143 55.9
CANSAT56G0191 Cannabis sativa HOM05D007678 ORTHO05D009658 9.3e-33 144.8 126 58.7
Lsat_1_v5_gn_5_155661 Lactuca sativa HOM05D007678 ORTHO05D009658 1.0e-31 141.4 203 42.9
QL04p021970 Quercus lobata HOM05D007678 ORTHO05D009658 1.7e-31 140.6 108 66.7
Phvul.008G043200 Phaseolus vulgaris HOM05D007678 ORTHO05D009658 6.6e-31 138.7 121 61.2
Cpa.g.sc33.162 Carica papaya HOM05D007678 ORTHO05D009658 1.8e-28 130.6 98 68.4
TPR.G8973 Trifolium pratense HOM05D007678 ORTHO05D009658 3.4e-27 126.3 96 63.5
Cc06_g20610 Coffea canephora HOM05D007678 ORTHO05D009658 3.8e-26 122.9 90 64.4
arahy.Tifrunner.gnm1.ann1.1DGF2A Arachis hypogaea HOM05D007678 ORTHO05D009658 1.6e-24 117.5 94 57.4
GSVIVG01012452001 Vitis vinifera HOM05D007678 ORTHO05D009658 1.3e-18 97.8 80 63.8
PRCOL_00006709 Prasinoderma coloniale HOM05D007678 ORTHO05D009658 1.1e-17 94.7 193 30.1
MCO01G505 Micromonas commoda HOM05D007678 ORTHO05D009658 4.6e-16 89.4 200 29.5
arahy.Tifrunner.gnm1.ann1.6E2HM0 Arachis hypogaea HOM05D007678 ORTHO05D009658 5.1e-15 85.9 77 55.8
CSS0047660 Camellia sinensis var. sinensis HOM05D007678 ORTHO05D009658 3.3e-14 83.2 73 58.9
arahy.Tifrunner.gnm1.ann1.78M82M Arachis hypogaea HOM05D007678 ORTHO05D009658 7.6e-11 72.0 64 57.8
Os07g0222900 Oryza sativa ssp. japonica HOM05D007678 ORTHO05D009658 6.5e-10 68.9 65 55.4
QL04p021975 Quercus lobata HOM05D007678 ORTHO05D009658 3.2e-09 66.6 58 58.6
arahy.Tifrunner.gnm1.ann1.NH3ZAS Arachis hypogaea HOM05D007678 ORTHO05D009658 9.3e-09 65.1 50 64.0
FAN03G1326 Fragaria x ananassa HOM05D001392 ORTHO05D006407 4.6e-08 62.8 67 55.2
QL02p047964 Quercus lobata HOM05D007678 ORTHO05D009658 6.7e-07 58.9 51 58.8
arahy.Tifrunner.gnm1.ann1.Q44M57 Arachis hypogaea HOM05D006052 ORTHO05D007319 3.3e-06 56.6 54 50.0


User provided reference genes

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