Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G2408 Salvia bowleyana HOM05D006402 ORTHO05D008099 2.9e-76 288.5 148 100.0
SalBow7G2419 Salvia bowleyana HOM05D006402 ORTHO05D008099 9.7e-72 273.5 155 92.3
SGA_v2.0_scaffold292G47394 Striga asiatica HOM05D006402 ORTHO05D008099 1.3e-55 219.9 157 73.9
Migut.C00897 Erythranthe guttata HOM05D006402 ORTHO05D008099 1.7e-55 219.5 159 74.2
MSTRG.1145 Avicennia marina HOM05D006402 ORTHO05D008099 2.8e-55 218.8 129 85.3
Cc10_g01150 Coffea canephora HOM05D006402 ORTHO05D008099 4.8e-55 218.0 131 84.0
CSS0047659 Camellia sinensis var. sinensis HOM05D006402 ORTHO05D008099 3.5e-53 211.8 137 75.2
unitig_32.g11245 Utricularia gibba HOM05D006402 ORTHO05D008099 1.3e-52 209.9 127 83.5
Nn6g34597 Nelumbo nucifera HOM05D006402 ORTHO05D008099 1.7e-52 209.5 131 79.4
Manes.05G142900 Manihot esculenta HOM05D006402 ORTHO05D008099 2.9e-52 208.8 135 77.0
Rhsim07G0248600 Rhododendron simsii HOM05D006402 ORTHO05D008099 6.5e-52 207.6 131 78.6
TAR628G1405 Trochodendron aralioides HOM05D006402 ORTHO05D008099 6.5e-52 207.6 136 75.0
CANSAT25G3089 Cannabis sativa HOM05D006402 ORTHO05D008099 1.1e-51 206.8 130 80.0
COL.COLO4_26087 Corchorus olitorius HOM05D006402 ORTHO05D008099 4.2e-51 204.9 140 75.7
QL02p012927 Quercus lobata HOM05D006402 ORTHO05D008099 4.2e-51 204.9 133 75.2
Duzib093G1673 Durio zibethinus HOM05D006402 ORTHO05D008099 5.5e-51 204.5 134 76.9
Dinv18455 Davidia involucrata HOM05D006402 ORTHO05D008099 1.2e-50 203.4 129 77.5
Nitab4.5_0003030g0100 Nicotiana tabacum HOM05D006402 ORTHO05D008099 2.1e-50 202.6 132 75.8
Sed0012705 Sechium edule HOM05D006402 ORTHO05D008099 3.6e-50 201.8 134 76.1
AUR62016156 Chenopodium quinoa HOM05D006402 ORTHO05D008099 4.7e-50 201.4 127 81.1
Hma1.2p1_0023F.1_g015780 Hydrangea macrophylla HOM05D006402 ORTHO05D008099 4.7e-50 201.4 133 74.4
Haze_22699 Corylus avellana HOM05D006402 ORTHO05D008099 6.1e-50 201.1 148 68.9
DCAR_007723 Daucus carota HOM05D006402 ORTHO05D008099 6.1e-50 201.1 135 70.4
Sc02g0008870 Simmondsia chinensis HOM05D006402 ORTHO05D008099 6.1e-50 201.1 136 75.7
Potri.002G016600 Populus trichocarpa HOM05D006402 ORTHO05D008099 1.8e-49 199.5 135 72.6
CiPaw.08G069100 Carya illinoinensis HOM05D006402 ORTHO05D008099 2.3e-49 199.1 130 78.5
Sopen04g035580 Solanum pennellii HOM05D006402 ORTHO05D008099 2.3e-49 199.1 132 75.0
PGSC0003DMG400009954 Solanum tuberosum HOM05D006402 ORTHO05D008099 3.0e-49 198.7 132 75.0
AUR62036301 Chenopodium quinoa HOM05D006402 ORTHO05D008099 4.0e-49 198.4 151 71.5
Gohir.A06G001000 Gossypium hirsutum HOM05D006402 ORTHO05D008099 4.0e-49 198.4 129 76.7
Peaxi162Scf00174g00075 Petunia axillaris HOM05D006402 ORTHO05D008099 5.2e-49 198.0 131 74.8
Aa31LG4G6170 Aethionema arabicum HOM05D006402 ORTHO05D008099 6.8e-49 197.6 139 71.2
MELO3C011341.2 Cucumis melo HOM05D006402 ORTHO05D008099 6.8e-49 197.6 131 75.6
Lj4C17T8 Lonicera japonica HOM05D006402 ORTHO05D008099 6.8e-49 197.6 131 76.3
AL2G36080 Arabidopsis lyrata HOM05D006402 ORTHO05D008099 8.8e-49 197.2 128 75.8
Ciclev10002722m.g Citrus clementina HOM05D006402 ORTHO05D008099 8.8e-49 197.2 128 76.6
PGR142G1353 Punica granatum HOM05D006402 ORTHO05D008099 8.8e-49 197.2 128 77.3
Solyc04g081940.3 Solanum lycopersicum HOM05D006402 ORTHO05D008099 8.8e-49 197.2 132 74.2
CAN.G311.71 Capsicum annuum HOM05D006402 ORTHO05D008099 1.2e-48 196.8 155 67.1
Sabra02G0013300 Salix brachista HOM05D006402 ORTHO05D008099 1.2e-48 196.8 135 71.9
Cfa014004 Carpinus fangiana HOM05D006402 ORTHO05D008099 1.5e-48 196.4 156 67.3
PGSC0003DMG400012651 Solanum tuberosum HOM05D006402 ORTHO05D008099 1.5e-48 196.4 132 73.5
Gorai.006G031900 Gossypium raimondii HOM05D006402 ORTHO05D008099 4.4e-48 194.9 129 78.3
Gohir.A09G028000 Gossypium hirsutum HOM05D006402 ORTHO05D008099 7.5e-48 194.1 129 76.0
arahy.Tifrunner.gnm1.ann1.KWDT0T Arachis hypogaea HOM05D006402 ORTHO05D008099 9.8e-48 193.7 141 66.0
Solyc02g085937.1 Solanum lycopersicum HOM05D006402 ORTHO05D008099 9.8e-48 193.7 132 72.7
Lalb_Chr23g0266011 Lupinus albus HOM05D006402 ORTHO05D008099 1.3e-47 193.4 132 72.0
Sed0017306 Sechium edule HOM05D006402 ORTHO05D008099 1.3e-47 193.4 134 72.4
THA.LOC104811442 Tarenaya hassleriana HOM05D006402 ORTHO05D008099 1.3e-47 193.4 136 71.3
Aqoxy6G00455 Aquilegia oxysepala HOM05D006402 ORTHO05D008099 1.7e-47 193.0 132 72.0
Gorai.010G001200 Gossypium raimondii HOM05D006402 ORTHO05D008099 1.7e-47 193.0 147 68.0
AT1G76060 Arabidopsis thaliana HOM05D006402 ORTHO05D008099 2.2e-47 192.6 137 70.8
Sopen02g030620 Solanum pennellii HOM05D006402 ORTHO05D008099 2.2e-47 192.6 132 72.7
Carub.0002s2294 Capsella rubella HOM05D006402 ORTHO05D008099 2.8e-47 192.2 128 73.4
EL10Ac1g02084 Beta vulgaris HOM05D006402 ORTHO05D008099 3.7e-47 191.8 127 75.6
HanXRQChr14g0429471 Helianthus annuus HOM05D006402 ORTHO05D008099 3.7e-47 191.8 130 75.4
ECA238G1428 Erigeron canadensis HOM05D006402 ORTHO05D008099 4.8e-47 191.4 132 74.2
MD08G1008000 Malus domestica HOM05D006402 ORTHO05D008099 8.3e-47 190.7 124 78.2
Prupe.1G359800 Prunus persica HOM05D006402 ORTHO05D008099 8.3e-47 190.7 125 77.6
Atru.chr13.220 Acer truncatum HOM05D006402 ORTHO05D008099 1.1e-46 190.3 130 74.6
ClCG08G014030 Citrullus lanatus HOM05D006402 ORTHO05D008099 1.1e-46 190.3 126 74.6
Sc02g0008830 Simmondsia chinensis HOM05D006402 ORTHO05D008099 1.1e-46 190.3 136 72.1
A02p20400 Brassica napus HOM05D006402 ORTHO05D008099 3.1e-46 188.7 129 71.3
Thhalv10019271m.g Eutrema salsugineum HOM05D006402 ORTHO05D008099 5.4e-46 188.0 125 72.8
A07p41620 Brassica napus HOM05D006402 ORTHO05D008099 7.0e-46 187.6 125 75.2
BraA07t31691Z Brassica rapa HOM05D006402 ORTHO05D008099 7.0e-46 187.6 125 75.2
MBI03_g11314_MAGBIO Magnolia biondii HOM05D006402 ORTHO05D008099 7.0e-46 187.6 130 68.5
Sp5g31180 Schrenkiella parvula HOM05D006402 ORTHO05D008099 7.0e-46 187.6 124 73.4
BcaC08g47098 Brassica carinata HOM05D006402 ORTHO05D008099 2.0e-45 186.0 138 68.1
Thecc.08G051300 Theobroma cacao HOM05D006402 ORTHO05D008099 2.0e-45 186.0 129 75.2
BolC6t40039H Brassica oleracea HOM05D006402 ORTHO05D008099 4.5e-45 184.9 124 75.0
CARHR069600 Cardamine hirsuta HOM05D006402 ORTHO05D008099 7.7e-45 184.1 128 69.5
arahy.Tifrunner.gnm1.ann1.R93WT9 Arachis hypogaea HOM05D006402 ORTHO05D008099 1.0e-44 183.7 141 63.1
C06p50000 Brassica napus HOM05D006402 ORTHO05D008099 1.3e-44 183.3 124 74.2
Cpa.g.sc81.101 Carica papaya HOM05D006402 ORTHO05D008099 3.8e-44 181.8 130 70.8
CDE05G2406 Ceratophyllum demersum HOM05D000228 ORTHO05D001122 3.8e-44 181.8 119 76.5
TWI14G1330 Tripterygium wilfordii HOM05D006402 ORTHO05D008099 3.8e-44 181.8 124 74.2
Ca_13483_v3 Cicer arietinum L. HOM05D006402 ORTHO05D008099 8.6e-44 180.6 127 70.1
RcHm_v2.0_Chr6g0303641 Rosa chinensis HOM05D006402 ORTHO05D008099 9.5e-43 177.2 129 71.3
PSO675G2459 Papaver somniferum HOM05D006402 ORTHO05D008099 1.2e-42 176.8 129 69.0
FvH4_2g37980 Fragaria vesca HOM05D006402 ORTHO05D008099 4.7e-42 174.9 129 71.3
Lj5g0026723 Lotus japonicus HOM05D006402 ORTHO05D008099 4.7e-42 174.9 124 71.0
Actinidia29765 Actinidia chinensis HOM05D006402 ORTHO05D008099 8.0e-42 174.1 139 62.6
FAN20G3208 Fragaria x ananassa HOM05D006402 ORTHO05D008099 8.0e-42 174.1 129 70.5
FAN27G3062 Fragaria x ananassa HOM05D006402 ORTHO05D008099 3.0e-41 172.2 129 69.8
Eucgr.F01698 Eucalyptus grandis HOM05D006402 ORTHO05D008099 5.2e-41 171.4 124 69.4
HPP92_013449 Vanilla planifolia HOM05D006402 ORTHO05D008099 5.2e-41 171.4 138 61.6
CsaV3_2G024420 Cucumis sativus L. HOM05D006402 ORTHO05D008099 1.2e-40 170.2 138 65.9
PSO541G5119 Papaver somniferum HOM05D006402 ORTHO05D008099 1.2e-40 170.2 126 67.5
Glyma.17G261100 Glycine max HOM05D006402 ORTHO05D008099 2.6e-40 169.1 119 70.6
Phvul.001G003000 Phaseolus vulgaris HOM05D006402 ORTHO05D008099 2.6e-40 169.1 121 68.6
ATR0580G246 Amborella trichopoda HOM05D006402 ORTHO05D008099 4.4e-40 168.3 132 65.9
VMungo0647G0728 Vigna mungo HOM05D006402 ORTHO05D008099 4.4e-40 168.3 124 67.7
Lsat_1_v5_gn_2_6761 Lactuca sativa HOM05D006402 ORTHO05D008099 1.7e-39 166.4 127 69.3
ATR0680G026 Amborella trichopoda HOM05D006402 ORTHO05D008099 2.8e-39 165.6 132 64.4
TPR.G26406 Trifolium pratense HOM05D006402 ORTHO05D008099 4.9e-39 164.9 124 67.7
SEGI_22650 Sequoiadendron giganteum HOM05D006402 ORTHO05D008099 6.3e-39 164.5 127 62.2
Glyma.09G042800 Glycine max HOM05D006402 ORTHO05D008099 8.3e-39 164.1 119 68.1
Gohir.D09G027401 Gossypium hirsutum HOM05D006402 ORTHO05D008099 7.0e-38 161.0 129 65.9
Psat6g001160 Pisum sativum HOM05D006402 ORTHO05D008099 4.5e-37 158.3 129 63.6
Medtr1g026078 Medicago truncatula HOM05D006402 ORTHO05D008099 1.0e-36 157.1 124 65.3
SHI08020 Sapria himalayana HOM05D006402 ORTHO05D008099 6.6e-36 154.5 124 62.9
BcaC03g15641 Brassica carinata HOM05D006402 ORTHO05D008099 9.5e-35 150.6 132 60.6
Os03g0136600 Oryza sativa ssp. japonica HOM05D006402 ORTHO05D008099 9.5e-35 150.6 136 58.1
Zm00001eb002920 Zea mays HOM05D006402 ORTHO05D008099 6.1e-34 147.9 123 61.8
Pp3c14_25160 Physcomitrium patens HOM05D006402 ORTHO05D008099 7.0e-30 134.4 123 56.1
SMO358G0213 Selaginella moellendorffii HOM05D006402 ORTHO05D008099 1.2e-29 133.7 125 55.2
BolC2t09355H Brassica oleracea HOM05D006402 ORTHO05D008099 3.9e-28 128.6 129 53.5
BraA02t07072Z Brassica rapa HOM05D006402 ORTHO05D008099 3.3e-27 125.6 89 70.8
C02p33500 Brassica napus HOM05D006402 ORTHO05D008099 1.2e-26 123.6 129 51.9
BcaC08g47099 Brassica carinata HOM05D006402 ORTHO05D008099 3.1e-25 119.0 91 65.9
AagrBONN_evm.TU.Sc2ySwM_228.4698 Anthoceros agrestis HOM05D006402 ORTHO05D008099 1.2e-24 117.1 115 53.0
Mapoly0186s0006 Marchantia polymorpha HOM05D006402 ORTHO05D008099 5.8e-24 114.8 130 46.2
PRCOL_00001167 Prasinoderma coloniale HOM05D006402 ORTHO05D008099 4.9e-23 111.7 107 53.3
QL08p014343 Quercus lobata HOM05D006402 ORTHO05D008099 1.4e-22 110.2 133 47.4
CBR_g51533 Chara braunii HOM05D006402 ORTHO05D008099 7.8e-21 104.4 119 46.2
MCO02G370 Micromonas commoda HOM05D006402 ORTHO05D008099 7.3e-19 97.8 81 56.8
Cre01.g028150 Chlamydomonas reinhardtii HOM05D006402 ORTHO05D008099 9.5e-19 97.4 111 45.0
Eucgr.F01697 Eucalyptus grandis HOM05D006402 ORTHO05D008099 9.5e-19 97.4 102 51.0
MD15G1006900 Malus domestica HOM05D006402 ORTHO05D008099 1.8e-17 93.2 90 60.0
Sed0026898 Sechium edule HOM05D006402 ORTHO05D008099 4.9e-15 85.1 120 44.2
BcaC08g47297 Brassica carinata HOM05D006402 ORTHO05D008099 4.1e-14 82.0 123 41.5
Glyma.14G222200 Glycine max HOM05D006402 ORTHO05D008099 1.1e-11 73.9 58 67.2
BcaB05g24967 Brassica carinata HOM05D000901 ORTHO05D001160 3.4e-08 62.4 90 44.4


User provided reference genes

Program Settings