Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G2337 Salvia bowleyana HOM05D005510 ORTHO05D006750 1.4e-248 862.4 428 100.0
SalBow6G2820 Salvia bowleyana HOM05D005510 ORTHO05D006750 2.0e-247 858.6 428 99.5
SGA_v2.0_scaffold69G23139 Striga asiatica HOM05D005510 ORTHO05D006750 2.1e-183 646.0 426 73.9
Cc06_g18550 Coffea canephora HOM05D005510 ORTHO05D006750 3.6e-175 618.6 396 73.7
Migut.J01685 Erythranthe guttata HOM05D005510 ORTHO05D006750 3.6e-175 618.6 398 74.6
Oeu008195.1 Olea europaea HOM05D005510 ORTHO05D006750 2.9e-169 599.0 398 71.6
Dinv14542 Davidia involucrata HOM05D005510 ORTHO05D006750 3.2e-168 595.5 423 70.7
CSS0010239 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 7.9e-167 590.9 400 70.2
Actinidia38200 Actinidia chinensis HOM05D005510 ORTHO05D006750 1.4e-166 590.1 395 70.9
Rhsim13G0197800 Rhododendron simsii HOM05D005510 ORTHO05D006750 9.7e-165 583.9 393 70.2
Potri.006G026100 Populus trichocarpa HOM05D005510 ORTHO05D006750 2.8e-164 582.4 394 70.1
Sopen10g030080 Solanum pennellii HOM05D005510 ORTHO05D006750 6.3e-164 581.3 397 70.0
PGSC0003DMG400008133 Solanum tuberosum HOM05D005510 ORTHO05D006750 3.1e-163 578.9 399 69.7
Ciclev10011846m.g Citrus clementina HOM05D005510 ORTHO05D006750 7.0e-163 577.8 390 71.0
Eucgr.A02173 Eucalyptus grandis HOM05D005510 ORTHO05D006750 1.7e-161 573.2 422 69.0
Solyc10g079440.2 Solanum lycopersicum HOM05D005510 ORTHO05D006750 2.9e-161 572.4 397 69.0
Prupe.7G023400 Prunus persica HOM05D005510 ORTHO05D006750 3.8e-161 572.0 418 67.2
Atru.chr8.924 Acer truncatum HOM05D005510 ORTHO05D006750 3.2e-160 568.9 399 69.4
Nn7g37230 Nelumbo nucifera HOM05D005510 ORTHO05D006750 5.5e-160 568.2 410 67.1
Manes.10G072300 Manihot esculenta HOM05D005510 ORTHO05D006750 9.4e-160 567.4 396 68.7
QL07p015480 Quercus lobata HOM05D005510 ORTHO05D006750 1.2e-159 567.0 398 68.3
Gohir.A01G189700 Gossypium hirsutum HOM05D005510 ORTHO05D006750 1.6e-159 566.6 397 70.0
Hma1.2p1_1327F.1_g275890 Hydrangea macrophylla HOM05D005510 ORTHO05D006750 2.1e-159 566.2 400 67.5
MBI13_g44207_MAGBIO Magnolia biondii HOM05D005510 ORTHO05D006750 3.6e-159 565.5 398 68.3
unitig_749.g14152 Utricularia gibba HOM05D005510 ORTHO05D006750 3.6e-159 565.5 397 70.8
Phvul.004G053400 Phaseolus vulgaris HOM05D005510 ORTHO05D006750 4.7e-159 565.1 390 68.5
TWI74G1137 Tripterygium wilfordii HOM05D005510 ORTHO05D006750 4.7e-159 565.1 386 69.7
Gorai.002G222700 Gossypium raimondii HOM05D005510 ORTHO05D006750 8.0e-159 564.3 402 68.9
MD14G1100100 Malus domestica HOM05D005510 ORTHO05D006750 8.0e-159 564.3 396 69.9
Medtr6g026730 Medicago truncatula HOM05D005510 ORTHO05D006750 8.0e-159 564.3 386 68.1
GSVIVG01025858001 Vitis vinifera HOM05D005510 ORTHO05D006750 8.0e-159 564.3 397 68.5
PGR042G2248 Punica granatum HOM05D005510 ORTHO05D006750 1.0e-158 563.9 422 66.8
Gohir.D01G179900 Gossypium hirsutum HOM05D005510 ORTHO05D006750 1.8e-158 563.1 402 68.7
MELO3C019166.2 Cucumis melo HOM05D005510 ORTHO05D006750 5.2e-158 561.6 399 68.4
Glyma.05G079900 Glycine max HOM05D005510 ORTHO05D006750 6.7e-158 561.2 408 65.4
Ca_04447_v3 Cicer arietinum L. HOM05D002043 ORTHO05D002207 2.0e-157 559.7 390 66.7
CsaV3_4G029010 Cucumis sativus L. HOM05D005510 ORTHO05D006750 2.0e-157 559.7 421 65.1
Duzib093G0795 Durio zibethinus HOM05D005510 ORTHO05D006750 4.4e-157 558.5 397 68.5
Peaxi162Scf00002g00419 Petunia axillaris HOM05D005510 ORTHO05D006750 5.7e-157 558.1 395 67.3
Cpa.g.sc33.180 Carica papaya HOM05D005510 ORTHO05D006750 2.8e-156 555.8 416 65.1
Sabra06G0019200 Salix brachista HOM05D005510 ORTHO05D006750 3.7e-156 555.4 422 64.2
Lsat_1_v5_gn_5_40140 Lactuca sativa HOM05D005510 ORTHO05D006750 6.3e-156 554.7 417 64.0
Hund24472 Selenicereus undatus HOM05D005510 ORTHO05D006750 6.3e-156 554.7 400 66.2
PSO384G1661 Papaver somniferum HOM05D005510 ORTHO05D006750 8.2e-156 554.3 425 64.5
Cfa019896 Carpinus fangiana HOM05D005510 ORTHO05D006750 1.4e-155 553.5 392 67.1
ATR1096G068 Amborella trichopoda HOM05D005510 ORTHO05D006750 2.4e-155 552.7 401 67.1
Aqoxy3G03066 Aquilegia oxysepala HOM05D005510 ORTHO05D006750 5.3e-155 551.6 392 67.9
PSO339G1815 Papaver somniferum HOM05D005510 ORTHO05D006750 1.2e-154 550.4 425 63.8
DCAR_020612 Daucus carota HOM05D005510 ORTHO05D006750 2.0e-154 549.7 393 66.4
Lj1C1070G2 Lonicera japonica HOM05D005510 ORTHO05D006750 2.6e-154 549.3 424 63.7
COL.COLO4_37568 Corchorus olitorius HOM05D005510 ORTHO05D006750 5.9e-154 548.1 424 64.2
RcHm_v2.0_Chr3g0495031 Rosa chinensis HOM05D005510 ORTHO05D006750 5.9e-154 548.1 416 64.7
Psat1g087480 Pisum sativum HOM05D005510 ORTHO05D006750 1.0e-153 547.4 390 65.1
AUR62020963 Chenopodium quinoa HOM05D005510 ORTHO05D006750 1.3e-153 547.0 429 62.2
FvH4_1g29380 Fragaria vesca HOM05D005510 ORTHO05D006750 2.2e-153 546.2 389 68.1
HanXRQChr02g0047171 Helianthus annuus HOM05D005510 ORTHO05D006750 2.2e-153 546.2 420 63.1
FAN26G2114 Fragaria x ananassa HOM05D005510 ORTHO05D006750 8.5e-153 544.3 389 67.9
Lalb_Chr02g0157631 Lupinus albus HOM05D005510 ORTHO05D006750 8.5e-153 544.3 411 64.0
Lj5g0015267 Lotus japonicus HOM05D005510 ORTHO05D006750 1.9e-152 543.1 396 64.6
EL10Ac3g07380 Beta vulgaris HOM05D005510 ORTHO05D006750 4.2e-152 542.0 398 65.1
HPP92_018208 Vanilla planifolia HOM05D005510 ORTHO05D006750 5.5e-152 541.6 394 66.8
Aa31LG10G11690 Aethionema arabicum HOM05D005510 ORTHO05D006750 5.2e-150 535.0 404 65.6
CDE08G0225 Ceratophyllum demersum HOM05D005510 ORTHO05D006750 1.7e-148 530.0 398 64.3
arahy.Tifrunner.gnm1.ann1.VC24PE Arachis hypogaea HOM05D005510 ORTHO05D006750 3.1e-147 525.8 478 56.9
arahy.Tifrunner.gnm1.ann1.RHHN50 Arachis hypogaea HOM05D005510 ORTHO05D006750 5.3e-147 525.0 453 58.5
EL10Ac3g07382 Beta vulgaris HOM05D005510 ORTHO05D006750 5.3e-147 525.0 432 59.7
AT3G56840 Arabidopsis thaliana HOM05D005510 ORTHO05D006750 9.1e-147 524.2 396 64.6
CANSAT11G0391 Cannabis sativa HOM05D005510 ORTHO05D006750 9.1e-147 524.2 389 64.0
AL5G38220 Arabidopsis lyrata HOM05D005510 ORTHO05D006750 2.0e-146 523.1 408 63.7
BcaC07g40115 Brassica carinata HOM05D005510 ORTHO05D006750 2.0e-146 523.1 398 64.3
BolC8t50825H Brassica oleracea HOM05D005510 ORTHO05D006750 2.0e-146 523.1 396 64.1
THA.LOC104803249 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 2.7e-146 522.7 400 63.5
Nitab4.5_0000646g0280 Nicotiana tabacum HOM05D005510 ORTHO05D006750 4.5e-146 521.9 415 62.9
TAR623G1399 Trochodendron aralioides HOM05D005510 ORTHO05D006750 4.5e-146 521.9 394 65.5
A09p49660 Brassica napus HOM05D005510 ORTHO05D006750 5.0e-145 518.5 396 64.1
BraA09t40419Z Brassica rapa HOM05D005510 ORTHO05D006750 5.0e-145 518.5 396 64.1
Thhalv10005964m.g Eutrema salsugineum HOM05D005510 ORTHO05D006750 2.5e-144 516.2 414 62.6
Carub.0005s2357 Capsella rubella HOM05D005510 ORTHO05D006750 4.2e-144 515.4 395 64.8
Sc13g0000690 Simmondsia chinensis HOM05D005510 ORTHO05D006750 4.2e-144 515.4 365 68.2
Sp5g05750 Schrenkiella parvula HOM05D005510 ORTHO05D006750 7.2e-144 514.6 396 64.1
Os01g0809900 Oryza sativa ssp. japonica HOM05D005510 ORTHO05D006750 8.0e-143 511.1 400 63.5
Haze_20353 Corylus avellana HOM05D005510 ORTHO05D006750 3.8e-137 492.3 373 64.3
VMungo0464G0325 Vigna mungo HOM05D005510 ORTHO05D006750 2.5e-136 489.6 433 56.6
CSS0036939 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 2.1e-135 486.5 330 68.8
BcaC07g39994 Brassica carinata HOM05D005510 ORTHO05D006750 1.8e-134 483.4 396 60.6
CAN.G641.38 Capsicum annuum HOM05D005510 ORTHO05D006750 8.9e-134 481.1 329 69.3
arahy.Tifrunner.gnm1.ann1.T4STFC Arachis hypogaea HOM05D005510 ORTHO05D006750 6.3e-132 474.9 418 57.4
ClCG04G005050 Citrullus lanatus HOM05D005510 ORTHO05D006750 2.0e-130 469.9 365 64.7
AUR62018456 Chenopodium quinoa HOM05D005510 ORTHO05D006750 9.5e-128 461.1 328 64.9
ECA246G1668 Erigeron canadensis HOM05D005510 ORTHO05D006750 1.2e-122 444.1 397 57.2
Thecc.05G124100 Theobroma cacao HOM05D005510 ORTHO05D006750 2.0e-122 443.4 312 68.9
Sed0017548 Sechium edule HOM05D005510 ORTHO05D006750 1.3e-121 440.7 313 68.4
Hma1.2p1_1327F.1_g275900 Hydrangea macrophylla HOM05D005510 ORTHO05D006750 7.3e-120 434.9 310 66.5
Pp3c12_4730 Physcomitrium patens HOM05D005510 ORTHO05D006750 1.2e-117 427.6 400 53.0
Nitab4.5_0002805g0080 Nicotiana tabacum HOM05D005510 ORTHO05D006750 4.4e-117 425.6 327 64.5
AagrBONN_evm.TU.Sc2ySwM_344.4799 Anthoceros agrestis HOM05D005510 ORTHO05D000746 2.5e-112 409.8 390 54.4
C08p32070 Brassica napus HOM05D005510 ORTHO05D006750 8.3e-108 394.8 311 62.7
CiPaw.09G161300 Carya illinoinensis HOM05D005510 ORTHO05D006750 9.2e-107 391.3 280 65.4
Mapoly0011s0121 Marchantia polymorpha HOM05D005510 ORTHO05D006750 1.5e-104 384.0 368 52.4
MBI13_g43864_MAGBIO Magnolia biondii HOM05D005510 ORTHO05D006750 6.2e-103 378.6 331 58.3
Zm00001eb150290 Zea mays HOM05D005510 ORTHO05D006750 5.8e-101 372.1 287 63.1
SMO116G0325 Selaginella moellendorffii HOM05D005510 ORTHO05D006750 1.7e-100 370.5 417 49.6
A09p49680 Brassica napus HOM05D005510 ORTHO05D006750 2.1e-98 363.6 285 61.4
BraA09t40424Z Brassica rapa HOM05D005510 ORTHO05D006750 3.5e-98 362.8 282 61.7
CSS0041188 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 7.3e-88 328.6 240 64.6
arahy.Tifrunner.gnm1.ann1.MR8QPJ Arachis hypogaea HOM05D005510 ORTHO05D006750 1.1e-86 324.7 412 45.1
Cre13.g574150 Chlamydomonas reinhardtii HOM05D005510 ORTHO05D006750 9.9e-85 318.2 442 43.9
TPR.G23234 Trifolium pratense HOM05D005510 ORTHO05D006750 4.2e-83 312.8 213 65.3
THA.LOC104803303 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 6.0e-82 308.9 237 60.3
CARHR166990 Cardamine hirsuta HOM05D005510 ORTHO05D006750 2.3e-81 307.0 232 62.5
CAN.G248.49 Capsicum annuum HOM05D005510 ORTHO05D006750 1.6e-74 284.3 350 45.1
MSTRG.19825 Avicennia marina HOM05D005510 ORTHO05D006750 1.5e-69 267.7 189 73.5
THA.LOC104803301 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 3.4e-69 266.5 185 64.9
Cfa027308 Carpinus fangiana HOM05D005510 ORTHO05D006750 9.4e-59 231.9 403 39.2
TPR.G942 Trifolium pratense HOM05D005510 ORTHO05D006750 6.9e-54 215.7 149 69.1
Manes.07G109500 Manihot esculenta HOM05D005510 ORTHO05D006750 3.8e-52 209.9 158 68.4
SalBow7G3561 Salvia bowleyana HOM05D005510 ORTHO05D006750 1.4e-51 208.0 122 86.9
SEGI_04748 Sequoiadendron giganteum HOM05D005510 ORTHO05D006750 1.9e-51 207.6 164 65.2
PGSC0003DMG400012053 Solanum tuberosum HOM05D005510 ORTHO05D006750 5.5e-51 206.1 146 63.7
Manes.05G099066 Manihot esculenta HOM05D005510 ORTHO05D006750 4.4e-48 196.4 163 63.2
Zm00001eb093570 Zea mays HOM05D005510 ORTHO05D006750 2.8e-47 193.7 249 44.2
CBR_g4412 Chara braunii HOM05D005510 ORTHO05D006750 2.7e-42 177.2 437 31.6
AagrBONN_evm.TU.Sc2ySwM_344.567 Anthoceros agrestis HOM05D005510 ORTHO05D006750 3.0e-41 173.7 442 31.9
SMO356G0394 Selaginella moellendorffii HOM05D005510 ORTHO05D006750 2.5e-35 154.1 430 27.9
Mapoly0085s0100 Marchantia polymorpha HOM05D005510 ORTHO05D006750 6.1e-34 149.4 461 29.7
Pp3c25_9310 Physcomitrium patens HOM05D005510 ORTHO05D006750 8.0e-34 149.1 426 29.6
CAN.G524.4 Capsicum annuum HOM05D005510 ORTHO05D006750 2.9e-28 130.6 88 69.3
PRCOL_00000521 Prasinoderma coloniale HOM05D005510 ORTHO05D006750 1.9e-27 127.9 414 27.3
CAN.G636.4 Capsicum annuum HOM05D005510 ORTHO05D006750 1.6e-26 124.8 235 36.2
Zm00001eb341880 Zea mays HOM05D005510 ORTHO05D006750 3.0e-25 120.6 113 52.2
MD14G1091800 Malus domestica HOM05D005510 ORTHO05D006750 8.8e-25 119.0 73 71.2
SEGI_32136 Sequoiadendron giganteum HOM05D005510 ORTHO05D006750 1.8e-22 111.3 80 65.0
AUR62018455 Chenopodium quinoa HOM05D005510 ORTHO05D006750 5.5e-19 99.8 100 57.0
MD14G1091600 Malus domestica HOM05D005510 ORTHO05D006750 1.4e-17 95.1 69 73.9
CAN.G641.39 Capsicum annuum HOM05D005510 ORTHO05D006750 4.4e-16 90.1 69 65.2
CAN.G524.9 Capsicum annuum HOM05D005510 ORTHO05D020273 9.2e-14 82.4 53 71.7
CDE09G0372 Ceratophyllum demersum HOM05D005510 ORTHO05D006750 1.7e-12 78.2 61 67.2
MD14G1091700 Malus domestica HOM05D005510 ORTHO05D006750 6.4e-07 59.7 37 73.0


User provided reference genes

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