Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G2037 Salvia bowleyana HOM05D007506 ORTHO05D008409 6.4e-25 117.1 82 100.0
Migut.F00865 Erythranthe guttata HOM05D007506 ORTHO05D008409 1.6e-15 85.9 56 78.6
Solyc11g006750.1 Solanum lycopersicum HOM05D007506 ORTHO05D008409 2.5e-13 78.6 56 75.0
Nitab4.5_0002586g0040 Nicotiana tabacum HOM05D007506 ORTHO05D008409 2.8e-12 75.1 56 71.4
Peaxi162Scf00125g00216 Petunia axillaris HOM05D007506 ORTHO05D008409 6.2e-12 73.9 56 66.1
Sopen11g002680 Solanum pennellii HOM05D007506 ORTHO05D008409 8.2e-12 73.6 56 71.4
PGSC0003DMG400023979 Solanum tuberosum HOM05D007506 ORTHO05D008409 1.1e-11 73.2 56 69.6
Dinv12843 Davidia involucrata HOM05D007506 ORTHO05D008409 3.1e-11 71.6 56 69.6
CAN.G1373.1 Capsicum annuum HOM05D007506 ORTHO05D008409 5.3e-11 70.9 57 70.2
Oeu027974.1 Olea europaea HOM05D007506 ORTHO05D008409 2.6e-10 68.6 56 71.4
CSS0050385 Camellia sinensis var. sinensis HOM05D007506 ORTHO05D008409 4.5e-10 67.8 56 67.9
Dinv02210 Davidia involucrata HOM05D007506 ORTHO05D008409 4.5e-10 67.8 55 65.5
Peaxi162Scf00519g00621 Petunia axillaris HOM05D007506 ORTHO05D008409 1.3e-09 66.2 56 67.9
SGA_v2.0_scaffold62G21316 Striga asiatica HOM05D007506 ORTHO05D008409 1.7e-09 65.9 52 73.1
Nitab4.5_0010633g0010 Nicotiana tabacum HOM05D007506 ORTHO05D008409 3.8e-09 64.7 59 64.4
Hma1.2p1_0756F.1_g213210 Hydrangea macrophylla HOM05D007506 ORTHO05D008409 5.0e-09 64.3 57 61.4
Hma1.2p1_0756F.1_g213215 Hydrangea macrophylla HOM05D007506 ORTHO05D008409 5.0e-09 64.3 57 61.4
Hma1.2p1_1491F.1_g286710 Hydrangea macrophylla HOM05D007506 ORTHO05D008409 5.0e-09 64.3 57 61.4
Nitab4.5_0005214g0030 Nicotiana tabacum HOM05D007506 ORTHO05D008409 6.5e-09 63.9 59 64.4
Nitab4.5_0015562g0010 Nicotiana tabacum HOM05D007506 ORTHO05D008409 8.4e-09 63.5 52 65.4
Oeu024806.1 Olea europaea HOM05D007506 ORTHO05D008409 8.4e-09 63.5 54 63.0
Cc02_g09560 Coffea canephora HOM05D007506 ORTHO05D008409 1.4e-08 62.8 57 64.9
Dinv02209 Davidia involucrata HOM05D007506 ORTHO05D008409 3.2e-08 61.6 50 66.0
Dinv07589 Davidia involucrata HOM05D007506 ORTHO05D008409 3.2e-08 61.6 50 66.0
TAR633G2594 Trochodendron aralioides HOM05D007506 ORTHO05D008409 5.5e-08 60.8 56 58.9
CAN.G1417.6 Capsicum annuum HOM05D007506 ORTHO05D008409 7.1e-08 60.5 52 67.3
unitig_899.g14468 Utricularia gibba HOM05D007506 ORTHO05D008409 7.1e-08 60.5 41 78.0
SalBow3G3829 Salvia bowleyana HOM05D007506 ORTHO05D008409 2.1e-07 58.9 43 67.4
Sc20g0001140 Simmondsia chinensis HOM05D007506 ORTHO05D008409 4.6e-07 57.8 53 62.3
PGSC0003DMG400023393 Solanum tuberosum HOM05D007506 ORTHO05D008409 6.1e-07 57.4 59 59.3
Hund06790 Selenicereus undatus HOM05D007506 ORTHO05D008409 7.9e-07 57.0 58 62.1
Cpa.g.sc54.9 Carica papaya HOM05D007506 ORTHO05D008409 1.0e-06 56.6 56 58.9
Ciclev10017346m.g Citrus clementina HOM05D007506 ORTHO05D008409 1.8e-06 55.8 48 64.6
PGR142G2547 Punica granatum HOM05D007506 ORTHO05D008409 1.8e-06 55.8 56 58.9
Potri.010G240401 Populus trichocarpa HOM05D007506 ORTHO05D008409 3.0e-06 55.1 56 57.1
TWI38G1985 Tripterygium wilfordii HOM05D007506 ORTHO05D008409 5.1e-06 54.3 56 55.4
CDE12G0642 Ceratophyllum demersum HOM05D007506 ORTHO05D008409 6.7e-06 53.9 56 51.8
Atru.chr12.1049 Acer truncatum HOM05D007506 ORTHO05D008409 8.7e-06 53.5 54 55.6
Manes.07G086800 Manihot esculenta HOM05D007506 ORTHO05D008409 8.7e-06 53.5 54 55.6
Manes.10G062500 Manihot esculenta HOM05D007506 ORTHO05D008409 8.7e-06 53.5 51 58.8
Nn6g34869 Nelumbo nucifera HOM05D007506 ORTHO05D008409 8.7e-06 53.5 57 61.4


User provided reference genes

Program Settings