Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G2004 Salvia bowleyana HOM05D000539 ORTHO05D000592 9.0e-56 219.9 105 100.0
SalBow8G2226 Salvia bowleyana HOM05D000539 ORTHO05D000592 2.2e-25 119.0 55 100.0
SalBow6G5433 Salvia bowleyana HOM05D000539 ORTHO05D000592 4.5e-15 84.7 93 41.9
SalBow7G2363 Salvia bowleyana HOM05D000539 ORTHO05D000592 3.8e-14 81.6 83 47.0
SalBow7G1279 Salvia bowleyana HOM05D000539 ORTHO05D000592 3.4e-10 68.6 72 43.1
FAN05G1979 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.3e-09 66.6 62 41.9
FAN05G4673 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.3e-09 66.6 62 41.9
FAN05G5337 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.3e-09 66.6 62 41.9
FAN06G2612 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.3e-09 66.6 62 41.9
FAN07G2556 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.3e-09 66.6 62 41.9
FAN09G4698 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.3e-09 66.6 62 41.9
FAN14G5053 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.3e-09 66.6 62 41.9
FAN23G1524 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.3e-09 66.6 62 41.9
FAN28G2269 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.3e-09 66.6 62 41.9
FAN28G2905 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.3e-09 66.6 62 41.9
RcHm_v2.0_Chr0c11g0499441 Rosa chinensis HOM05D000539 ORTHO05D000592 1.7e-09 66.2 61 42.6
RcHm_v2.0_Chr3g0495851 Rosa chinensis HOM05D000539 ORTHO05D000592 2.2e-09 65.9 61 42.6
SalBow3G0450 Salvia bowleyana HOM05D000539 ORTHO05D000592 8.3e-09 63.9 61 47.5
FvH4_4g09070 Fragaria vesca HOM05D000539 ORTHO05D000592 1.1e-08 63.5 62 40.3
FAN12G0188 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.1e-08 63.5 62 40.3
RcHm_v2.0_Chr1g0364031 Rosa chinensis HOM05D000539 ORTHO05D000233 1.1e-08 63.5 61 44.3
RcHm_v2.0_Chr7g0209041 Rosa chinensis HOM05D000539 ORTHO05D000592 1.1e-08 63.5 61 44.3
RcHm_v2.0_Chr5g0079561 Rosa chinensis HOM05D000539 ORTHO05D000592 1.4e-08 63.2 61 44.3
FAN10G3314 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.8e-08 62.8 62 40.3
RcHm_v2.0_Chr7g0227181 Rosa chinensis HOM05D000539 ORTHO05D000592 1.8e-08 62.8 60 45.0
RcHm_v2.0_Chr4g0424911 Rosa chinensis HOM05D000539 ORTHO05D000592 2.4e-08 62.4 60 45.0
FvH4_1g15060 Fragaria vesca HOM05D000539 ORTHO05D000592 5.4e-08 61.2 109 28.4
SalBow1G0244 Salvia bowleyana HOM05D000539 ORTHO05D000592 5.4e-08 61.2 61 45.9
FAN12G3432 Fragaria x ananassa HOM05D000539 ORTHO05D000592 9.2e-08 60.5 61 41.0
FAN28G2186 Fragaria x ananassa HOM05D000539 ORTHO05D000592 9.2e-08 60.5 62 38.7
RcHm_v2.0_Chr2g0140381 Rosa chinensis HOM05D000539 ORTHO05D000592 1.2e-07 60.1 61 42.6
SalBow6G4879 Salvia bowleyana HOM05D000539 ORTHO05D000592 1.2e-07 60.1 70 38.6
RcHm_v2.0_Chr2g0095661 Rosa chinensis HOM05D000539 ORTHO05D000592 1.6e-07 59.7 60 40.0
RcHm_v2.0_Chr4g0414241 Rosa chinensis HOM05D000539 ORTHO05D000592 2.0e-07 59.3 61 39.3
RcHm_v2.0_Chr5g0072071 Rosa chinensis HOM05D000539 ORTHO05D000592 2.0e-07 59.3 61 39.3
RcHm_v2.0_Chr3g0495531 Rosa chinensis HOM05D000539 ORTHO05D000592 2.7e-07 58.9 61 37.7
SalBow3G2055 Salvia bowleyana HOM05D000539 ORTHO05D000592 2.7e-07 58.9 45 55.6
SalBow3G2933 Salvia bowleyana HOM05D000539 ORTHO05D000592 2.7e-07 58.9 45 55.6
SalBow5G2382 Salvia bowleyana HOM05D000539 ORTHO05D000592 2.7e-07 58.9 45 55.6
SalBow5G3967 Salvia bowleyana HOM05D000539 ORTHO05D000592 2.7e-07 58.9 45 55.6
SalBow5G4813 Salvia bowleyana HOM05D000539 ORTHO05D000592 2.7e-07 58.9 45 55.6
FAN01G1337 Fragaria x ananassa HOM05D000539 ORTHO05D000592 3.5e-07 58.5 52 42.3
FvH4_5g33852 Fragaria vesca HOM05D000539 ORTHO05D000592 5.9e-07 57.8 61 44.3
FAN19G1903 Fragaria x ananassa HOM05D000539 ORTHO05D000592 5.9e-07 57.8 61 41.0
RcHm_v2.0_Chr5g0072991 Rosa chinensis HOM05D000539 ORTHO05D000592 7.7e-07 57.4 61 42.6
FAN10G0309 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.0e-06 57.0 63 38.1
FAN06G4635 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.3e-06 56.6 110 31.8
FAN13G0463 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.3e-06 56.6 110 31.8
FAN16G0584 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.3e-06 56.6 110 31.8
FAN16G3090 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.3e-06 56.6 110 31.8
FAN20G0711 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.3e-06 56.6 110 31.8
FAN23G2427 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.3e-06 56.6 110 31.8
FAN26G0996 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.3e-06 56.6 110 31.8
FAN27G0332 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.3e-06 56.6 110 31.8
RcHm_v2.0_Chr3g0483461 Rosa chinensis HOM05D000539 ORTHO05D000233 1.7e-06 56.2 61 36.1
RcHm_v2.0_Chr3g0485231 Rosa chinensis HOM05D000539 ORTHO05D000592 1.7e-06 56.2 61 36.1
FAN04G0378 Fragaria x ananassa HOM05D000539 ORTHO05D000592 2.3e-06 55.8 62 41.9
Prupe.6G193600 Prunus persica HOM05D000539 ORTHO05D000233 2.3e-06 55.8 70 32.9
RcHm_v2.0_Chr2g0112301 Rosa chinensis HOM05D000539 ORTHO05D000233 2.3e-06 55.8 70 35.7
FvH4_1g26740 Fragaria vesca HOM05D000539 ORTHO05D000592 2.9e-06 55.5 64 43.8
FAN19G2795 Fragaria x ananassa HOM05D000539 ORTHO05D000592 2.9e-06 55.5 64 43.8
Rhsim10G0157200 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.9e-06 55.5 57 45.6
RcHm_v2.0_Chr1g0316591 Rosa chinensis HOM05D000539 ORTHO05D000592 2.9e-06 55.5 62 37.1
RcHm_v2.0_Chr1g0318241 Rosa chinensis HOM05D000539 ORTHO05D000592 2.9e-06 55.5 61 37.7
RcHm_v2.0_Chr1g0325001 Rosa chinensis HOM05D000539 ORTHO05D000592 2.9e-06 55.5 61 37.7
RcHm_v2.0_Chr3g0481131 Rosa chinensis HOM05D000539 ORTHO05D000592 2.9e-06 55.5 61 36.1
RcHm_v2.0_Chr7g0228381 Rosa chinensis HOM05D000539 ORTHO05D000592 2.9e-06 55.5 62 37.1
FAN07G2619 Fragaria x ananassa HOM05D000539 ORTHO05D000592 3.8e-06 55.1 110 30.9
FAN08G0101 Fragaria x ananassa HOM05D007187 ORTHO05D009219 3.8e-06 55.1 60 35.0
FAN25G3640 Fragaria x ananassa HOM05D000539 ORTHO05D000592 3.8e-06 55.1 110 30.9
FAN26G1947 Fragaria x ananassa HOM05D000539 ORTHO05D000592 3.8e-06 55.1 110 30.9
FAN04G1988 Fragaria x ananassa HOM05D000539 ORTHO05D000592 5.0e-06 54.7 110 30.9
FAN06G0584 Fragaria x ananassa HOM05D000539 ORTHO05D000592 5.0e-06 54.7 110 30.9
FAN06G2632 Fragaria x ananassa HOM05D000539 ORTHO05D000592 5.0e-06 54.7 110 30.9
FAN06G3425 Fragaria x ananassa HOM05D000539 ORTHO05D000592 5.0e-06 54.7 110 30.9
FAN07G1063 Fragaria x ananassa HOM05D000539 ORTHO05D000592 5.0e-06 54.7 110 30.9
FAN11G2362 Fragaria x ananassa HOM05D000539 ORTHO05D000592 5.0e-06 54.7 110 30.9
FAN16G1455 Fragaria x ananassa HOM05D000539 ORTHO05D000592 5.0e-06 54.7 110 30.9
FAN16G2445 Fragaria x ananassa HOM05D000539 ORTHO05D000592 5.0e-06 54.7 110 30.9
FAN17G0771 Fragaria x ananassa HOM05D000539 ORTHO05D000233 5.0e-06 54.7 110 30.9
FAN22G1565 Fragaria x ananassa HOM05D000539 ORTHO05D000233 5.0e-06 54.7 110 30.9
FAN23G0124 Fragaria x ananassa HOM05D000539 ORTHO05D000592 5.0e-06 54.7 110 30.9
FAN23G1482 Fragaria x ananassa HOM05D000539 ORTHO05D000592 5.0e-06 54.7 110 30.9
FAN23G2368 Fragaria x ananassa HOM05D000539 ORTHO05D000592 5.0e-06 54.7 110 30.9
FAN24G2468 Fragaria x ananassa HOM05D000539 ORTHO05D000233 5.0e-06 54.7 110 30.9
FAN25G3215 Fragaria x ananassa HOM05D000539 ORTHO05D000592 5.0e-06 54.7 110 30.9
FAN26G2944 Fragaria x ananassa HOM05D000539 ORTHO05D000592 5.0e-06 54.7 110 30.9
FAN26G3431 Fragaria x ananassa HOM05D000539 ORTHO05D000592 5.0e-06 54.7 110 30.9
FAN28G2676 Fragaria x ananassa HOM05D000539 ORTHO05D000592 5.0e-06 54.7 110 30.9
Prupe.1G036300 Prunus persica HOM05D000539 ORTHO05D000592 5.0e-06 54.7 63 41.3
Prupe.1G310400 Prunus persica HOM05D000539 ORTHO05D000592 5.0e-06 54.7 63 41.3
Prupe.2G045600 Prunus persica HOM05D000539 ORTHO05D000592 5.0e-06 54.7 63 41.3
Prupe.5G051700 Prunus persica HOM05D000539 ORTHO05D000592 5.0e-06 54.7 63 41.3
Prupe.7G057400 Prunus persica HOM05D000539 ORTHO05D000592 5.0e-06 54.7 63 41.3
Prupe.8G054500 Prunus persica HOM05D000539 ORTHO05D000592 5.0e-06 54.7 63 41.3
Rhsim02G0146100 Rhododendron simsii HOM05D000539 ORTHO05D000233 5.0e-06 54.7 57 42.1
RcHm_v2.0_Chr5g0045831 Rosa chinensis HOM05D000539 ORTHO05D000592 5.0e-06 54.7 61 36.1
FvH4_2g11482 Fragaria vesca HOM05D000539 ORTHO05D000592 6.6e-06 54.3 61 37.7
FAN05G3022 Fragaria x ananassa HOM05D000539 ORTHO05D000592 6.6e-06 54.3 110 30.9
FAN06G0003 Fragaria x ananassa HOM05D000539 ORTHO05D000592 6.6e-06 54.3 110 30.9
RcHm_v2.0_Chr7g0235441 Rosa chinensis HOM05D000539 ORTHO05D000592 6.6e-06 54.3 61 41.0
FAN07G0440 Fragaria x ananassa HOM05D000539 ORTHO05D000592 8.6e-06 53.9 60 36.7
FAN14G3091 Fragaria x ananassa HOM05D000539 ORTHO05D000592 8.6e-06 53.9 42 47.6
FAN14G5943 Fragaria x ananassa HOM05D000539 ORTHO05D000592 8.6e-06 53.9 42 47.6
Prupe.1G199400 Prunus persica HOM05D000539 ORTHO05D000592 8.6e-06 53.9 63 39.7
Prupe.1G202700 Prunus persica HOM05D000539 ORTHO05D000592 8.6e-06 53.9 63 39.7
Prupe.1G237300 Prunus persica HOM05D000539 ORTHO05D000592 8.6e-06 53.9 63 39.7
Prupe.1G397800 Prunus persica HOM05D000539 ORTHO05D000592 8.6e-06 53.9 63 39.7
Prupe.2G089500 Prunus persica HOM05D000539 ORTHO05D000592 8.6e-06 53.9 63 39.7
Prupe.2G094600 Prunus persica HOM05D000539 ORTHO05D000592 8.6e-06 53.9 63 39.7
Prupe.3G118800 Prunus persica HOM05D000539 ORTHO05D000592 8.6e-06 53.9 63 39.7
Prupe.3G119600 Prunus persica HOM05D000539 ORTHO05D000592 8.6e-06 53.9 63 39.7
Prupe.6G180100 Prunus persica HOM05D000539 ORTHO05D000592 8.6e-06 53.9 63 39.7
Prupe.7G033400 Prunus persica HOM05D000539 ORTHO05D000592 8.6e-06 53.9 63 39.7
Prupe.8G047800 Prunus persica HOM05D000539 ORTHO05D000592 8.6e-06 53.9 63 39.7
RcHm_v2.0_Chr2g0108851 Rosa chinensis HOM05D000539 ORTHO05D000592 8.6e-06 53.9 61 39.3
RcHm_v2.0_Chr2g0134051 Rosa chinensis HOM05D000539 ORTHO05D000592 8.6e-06 53.9 61 39.3
RcHm_v2.0_Chr3g0495121 Rosa chinensis HOM05D000539 ORTHO05D000592 8.6e-06 53.9 61 34.4
RcHm_v2.0_Chr7g0197301 Rosa chinensis HOM05D000539 ORTHO05D000592 8.6e-06 53.9 61 39.3
RcHm_v2.0_Chr7g0235651 Rosa chinensis HOM05D000539 ORTHO05D000233 8.6e-06 53.9 61 39.3


User provided reference genes

Program Settings