Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G2000 Salvia bowleyana HOM05D007620 ORTHO05D009568 5.7e-54 216.1 463 100.0
Migut.F00879 Erythranthe guttata HOM05D007620 ORTHO05D009568 7.8e-27 125.9 76 77.6
Oeu026591.1 Olea europaea HOM05D007620 ORTHO05D009568 3.0e-26 124.0 76 73.7
Hma1.2p1_1512F.1_g287900 Hydrangea macrophylla HOM05D007620 ORTHO05D009568 6.2e-24 116.3 76 68.4
Lj2C43T7 Lonicera japonica HOM05D007620 ORTHO05D009568 8.1e-24 115.9 75 68.0
Lsat_1_v5_gn_8_24880 Lactuca sativa HOM05D007620 ORTHO05D009568 1.8e-23 114.8 76 67.1
QL03p030456 Quercus lobata HOM05D007620 ORTHO05D009568 4.0e-23 113.6 75 68.0
Haze_04424 Corylus avellana HOM05D007620 ORTHO05D009568 6.9e-23 112.8 75 66.7
Psat0s1841g0080 Pisum sativum HOM05D007620 ORTHO05D009568 1.5e-22 111.7 75 65.3
CSS0021218 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 5.8e-22 109.8 74 64.9
CSS0034254 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 5.8e-22 109.8 74 64.9
EL10Ac4g09018 Beta vulgaris HOM05D007620 ORTHO05D009568 7.6e-22 109.4 76 63.2
Gohir.A11G247300 Gossypium hirsutum HOM05D007620 ORTHO05D009568 7.6e-22 109.4 76 60.5
PSO210G6557 Papaver somniferum HOM05D007620 ORTHO05D009568 7.6e-22 109.4 74 66.2
ECA233G5729 Erigeron canadensis HOM05D007620 ORTHO05D009568 9.9e-22 109.0 76 64.5
CSS0013452 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 1.3e-21 108.6 74 63.5
Thecc.05G270800 Theobroma cacao HOM05D007620 ORTHO05D009568 1.7e-21 108.2 76 59.2
MELO3C010128.2 Cucumis melo HOM05D007620 ORTHO05D009568 2.9e-21 107.5 76 61.8
Duzib177G1032 Durio zibethinus HOM05D007620 ORTHO05D009568 2.9e-21 107.5 76 57.9
CsaV3_1G045110 Cucumis sativus L. HOM05D007620 ORTHO05D009568 3.8e-21 107.1 76 61.8
Gohir.D11G257601 Gossypium hirsutum HOM05D007620 ORTHO05D009568 3.8e-21 107.1 76 59.2
Gorai.007G275900 Gossypium raimondii HOM05D007620 ORTHO05D009568 3.8e-21 107.1 76 59.2
Solyc04g010060.2 Solanum lycopersicum HOM05D007620 ORTHO05D009568 3.8e-21 107.1 74 66.2
FAN14G2205 Fragaria x ananassa HOM05D004964 ORTHO05D005918 4.9e-21 106.7 75 64.0
Nn1g02811 Nelumbo nucifera HOM05D007620 ORTHO05D009568 4.9e-21 106.7 74 66.2
Cc02_g08810 Coffea canephora HOM05D007620 ORTHO05D009568 6.4e-21 106.3 76 64.5
CANSAT21G0311 Cannabis sativa HOM05D007620 ORTHO05D009568 8.4e-21 105.9 76 59.2
ClCG03G009720 Citrullus lanatus HOM05D007620 ORTHO05D009568 8.4e-21 105.9 76 60.5
SGA_v2.0_scaffold13G06478 Striga asiatica HOM05D007620 ORTHO05D009568 8.4e-21 105.9 76 64.5
Phvul.008G151824 Phaseolus vulgaris HOM05D007620 ORTHO05D009568 5.4e-20 103.2 76 60.5
Sed0010835 Sechium edule HOM05D007620 ORTHO05D009568 5.4e-20 103.2 75 60.0
THA.LOC104801727 Tarenaya hassleriana HOM05D007620 ORTHO05D009568 5.4e-20 103.2 76 59.2
MD04G1230300 Malus domestica HOM05D007620 ORTHO05D009568 7.1e-20 102.8 76 60.5
CDE04G2606 Ceratophyllum demersum HOM05D007620 ORTHO05D009568 9.3e-20 102.4 74 58.1
Sc09g0004220 Simmondsia chinensis HOM05D007620 ORTHO05D009568 1.2e-19 102.1 76 57.9
VMungo0720G2663 Vigna mungo HOM05D007620 ORTHO05D009568 2.1e-19 101.3 76 59.2
COL.COLO4_15485 Corchorus olitorius HOM05D007620 ORTHO05D009568 4.6e-19 100.1 74 56.8
Glyma.20G222800 Glycine max HOM05D007620 ORTHO05D009568 4.6e-19 100.1 76 57.9
Ciclev10019446m.g Citrus clementina HOM05D007620 ORTHO05D009568 7.8e-19 99.4 76 57.9
Atru.chr2.986 Acer truncatum HOM05D007620 ORTHO05D009568 2.3e-18 97.8 72 56.9
C05p62520 Brassica napus HOM05D007620 ORTHO05D009568 2.3e-18 97.8 76 55.3
A05p42800 Brassica napus HOM05D007620 ORTHO05D009568 3.0e-18 97.4 76 55.3
BolC5t34907H Brassica oleracea HOM05D007620 ORTHO05D009568 3.0e-18 97.4 76 55.3
BraA05t22972Z Brassica rapa HOM05D007620 ORTHO05D009568 3.0e-18 97.4 76 55.3
Lj2C43T8 Lonicera japonica HOM05D007620 ORTHO05D009568 3.9e-18 97.1 74 59.5
Glyma.10G166400 Glycine max HOM05D007620 ORTHO05D009568 6.6e-18 96.3 76 57.9
Aqoxy5G00210 Aquilegia oxysepala HOM05D007620 ORTHO05D009568 1.5e-17 95.1 73 57.5
ATR0736G141 Amborella trichopoda HOM05D007620 ORTHO05D009568 1.9e-17 94.7 70 60.0
Ca_09448_v3 Cicer arietinum L. HOM05D007620 ORTHO05D009568 2.5e-17 94.4 76 53.9
Psat6g139880 Pisum sativum HOM05D007620 ORTHO05D009568 3.3e-17 94.0 117 43.6
Dinv24674 Davidia involucrata HOM05D007620 ORTHO05D009568 7.3e-17 92.8 148 51.4
CSS0031974 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 2.4e-15 87.8 57 64.9
TAR362G1297 Trochodendron aralioides HOM05D007620 ORTHO05D009568 4.0e-15 87.0 74 58.1
HPP92_005407 Vanilla planifolia HOM05D007620 ORTHO05D009568 9.9e-14 82.4 74 47.3
MD12G1247200 Malus domestica HOM05D007620 ORTHO05D009568 2.9e-13 80.9 76 55.3
Cfa006355 Carpinus fangiana HOM05D007620 ORTHO05D009568 2.1e-11 74.7 75 50.7
Prupe.6G350200 Prunus persica HOM05D007620 ORTHO05D009568 3.9e-10 70.5 76 47.4
FvH4_6g01920 Fragaria vesca HOM05D007620 ORTHO05D009568 8.7e-10 69.3 75 46.7
FAN05G4025 Fragaria x ananassa HOM05D004964 ORTHO05D005918 8.7e-10 69.3 75 46.7
FAN05G4826 Fragaria x ananassa HOM05D004964 ORTHO05D005918 8.7e-10 69.3 75 46.7
RcHm_v2.0_Chr3g0449651 Rosa chinensis HOM05D007620 ORTHO05D009568 1.1e-09 68.9 75 46.7
CAN.G358.141 Capsicum annuum HOM05D007620 ORTHO05D009568 1.5e-09 68.6 74 48.6
Lj5g0020911 Lotus japonicus HOM05D007620 ORTHO05D009568 1.5e-09 68.6 76 47.4
FAN02G1272 Fragaria x ananassa HOM05D004964 ORTHO05D005918 3.3e-09 67.4 75 45.3
MD12G1247400 Malus domestica HOM05D007620 ORTHO05D009568 4.3e-09 67.0 76 44.7
PGSC0003DMG400011475 Solanum tuberosum HOM05D007620 ORTHO05D009568 4.3e-09 67.0 71 49.3
Peaxi162Scf00528g00227 Petunia axillaris HOM05D007620 ORTHO05D009568 5.6e-09 66.6 95 41.1
Potri.013G047000 Populus trichocarpa HOM05D007620 ORTHO05D009568 5.6e-09 66.6 76 44.7
DCAR_023086 Daucus carota HOM05D007620 ORTHO05D009568 9.6e-09 65.9 76 44.7
Potri.019G019300 Populus trichocarpa HOM05D007620 ORTHO05D009568 1.6e-08 65.1 76 42.1
GSVIVG01023503001 Vitis vinifera HOM05D007620 ORTHO05D009568 2.1e-08 64.7 75 45.3
Lalb_Chr21g0311191 Lupinus albus HOM05D007620 ORTHO05D009568 3.7e-08 63.9 75 44.0
Sopen04g005200 Solanum pennellii HOM05D007620 ORTHO05D009568 3.7e-08 63.9 43 62.8
Medtr1g080110 Medicago truncatula HOM05D007620 ORTHO05D009568 4.8e-08 63.5 40 72.5
Nitab4.5_0006737g0010 Nicotiana tabacum HOM05D007620 ORTHO05D009568 6.2e-08 63.2 43 60.5
Sp3g03610 Schrenkiella parvula HOM05D007620 ORTHO05D009568 8.1e-08 62.8 76 42.1
Manes.08G053900 Manihot esculenta HOM05D007620 ORTHO05D009568 1.1e-07 62.4 76 39.5
PGR004G2089 Punica granatum HOM05D007620 ORTHO05D009568 1.1e-07 62.4 71 42.3
Sabra13G0043000 Salix brachista HOM05D007620 ORTHO05D009568 1.1e-07 62.4 75 42.7
Nitab4.5_0003780g0130 Nicotiana tabacum HOM05D007620 ORTHO05D009568 1.8e-07 61.6 43 60.5
Lalb_Chr06g0168291 Lupinus albus HOM05D007620 ORTHO05D009568 3.1e-07 60.8 40 67.5
Thhalv10022408m.g Eutrema salsugineum HOM05D007620 ORTHO05D009568 6.9e-07 59.7 44 52.3
TPR.G22332 Trifolium pratense HOM05D007620 ORTHO05D009568 6.9e-07 59.7 44 59.1
Lj1g0023548 Lotus japonicus HOM05D007620 ORTHO05D009568 9.0e-07 59.3 41 63.4
Carub.0003s0393 Capsella rubella HOM05D007620 ORTHO05D009568 1.2e-06 58.9 76 40.8
Aa31LG5G15170 Aethionema arabicum HOM05D007620 ORTHO05D009568 2.0e-06 58.2 74 40.5
COL.COLO4_15482 Corchorus olitorius HOM05D007620 ORTHO05D009568 2.6e-06 57.8 44 56.8
AT3G04760 Arabidopsis thaliana HOM05D007620 ORTHO05D009568 7.6e-06 56.2 76 39.5
CARHR079010 Cardamine hirsuta HOM05D007620 ORTHO05D009568 7.6e-06 56.2 76 39.5
AL3G14890 Arabidopsis lyrata HOM05D007620 ORTHO05D009568 9.9e-06 55.8 76 38.2
Eucgr.H04228 Eucalyptus grandis HOM05D007620 ORTHO05D009568 9.9e-06 55.8 76 38.2


User provided reference genes

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