Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G1714 Salvia bowleyana HOM05D000042 ORTHO05D360488 5.0e-117 424.5 216 100.0
MSTRG.16616 Avicennia marina HOM05D000042 ORTHO05D001427 1.0e-13 81.3 71 57.7
MSTRG.5284 Avicennia marina HOM05D000042 ORTHO05D001427 1.3e-13 80.9 62 66.1
Peaxi162Scf00299g00717 Petunia axillaris HOM05D000042 ORTHO05D001427 1.9e-12 77.0 164 36.0
Migut.B00557 Erythranthe guttata HOM05D000042 ORTHO05D001427 3.3e-12 76.3 179 35.8
Oeu029679.2 Olea europaea HOM05D000042 ORTHO05D001427 4.3e-12 75.9 136 36.0
Solyc01g105800.4 Solanum lycopersicum HOM05D000042 ORTHO05D001427 6.3e-11 72.0 81 46.9
Sopen01g048260 Solanum pennellii HOM05D000042 ORTHO05D001427 8.2e-11 71.6 80 47.5
PGSC0003DMG400033570 Solanum tuberosum HOM05D000042 ORTHO05D001427 8.2e-11 71.6 80 47.5
CAN.G523.13 Capsicum annuum HOM05D000042 ORTHO05D001427 1.1e-10 71.2 171 32.7
CSS0000974 Camellia sinensis var. sinensis HOM05D000042 ORTHO05D001427 3.1e-10 69.7 133 36.8
CSS0010938 Camellia sinensis var. sinensis HOM05D000042 ORTHO05D001427 3.1e-10 69.7 133 36.8
Actinidia01161 Actinidia chinensis HOM05D000042 ORTHO05D001427 4.1e-10 69.3 141 33.3
MSTRG.16618 Avicennia marina HOM05D000042 ORTHO05D001427 9.0e-10 68.2 65 53.8
Duzib248G1604 Durio zibethinus HOM05D000042 ORTHO05D001427 9.0e-10 68.2 68 51.5
Nitab4.5_0001026g0080 Nicotiana tabacum HOM05D000042 ORTHO05D001427 1.2e-09 67.8 65 52.3
Cc02_g20960 Coffea canephora HOM05D000042 ORTHO05D001427 2.0e-09 67.0 137 35.0
COL.COLO4_32384 Corchorus olitorius HOM05D000042 ORTHO05D001427 7.6e-09 65.1 133 36.1
Haze_10537 Corylus avellana HOM05D000869 ORTHO05D000685 1.0e-08 64.7 156 27.6
Gohir.D12G016900 Gossypium hirsutum HOM05D000042 ORTHO05D001427 1.0e-08 64.7 68 50.0
Gorai.008G017200 Gossypium raimondii HOM05D000042 ORTHO05D001427 1.0e-08 64.7 68 50.0
Duzib132G0894 Durio zibethinus HOM05D000042 ORTHO05D001427 1.7e-08 63.9 68 48.5
Atru.chr6.1251 Acer truncatum HOM05D000042 ORTHO05D001427 2.9e-08 63.2 140 35.0
CSS0008173 Camellia sinensis var. sinensis HOM05D000042 ORTHO05D001427 3.8e-08 62.8 74 39.2
TWI12G1419 Tripterygium wilfordii HOM05D000042 ORTHO05D001427 3.8e-08 62.8 132 34.1
GSVIVG01009171001 Vitis vinifera HOM05D000042 ORTHO05D001427 3.8e-08 62.8 133 30.1
EL10Ac1g01057 Beta vulgaris HOM05D000042 ORTHO05D001427 5.0e-08 62.4 152 32.2
Potri.017G044500 Populus trichocarpa HOM05D000042 ORTHO05D001427 5.0e-08 62.4 97 35.1
Ciclev10029491m.g Citrus clementina HOM05D000042 ORTHO05D001427 6.5e-08 62.0 66 47.0
Duzib116G0405 Durio zibethinus HOM05D000042 ORTHO05D001427 6.5e-08 62.0 71 42.3
vmacro01856 Vaccinium macrocarpon HOM05D000042 ORTHO05D001427 6.5e-08 62.0 67 47.8
Gohir.A03G177200 Gossypium hirsutum HOM05D000042 ORTHO05D001427 8.5e-08 61.6 69 47.8
QL09p017707 Quercus lobata HOM05D000042 ORTHO05D001427 8.5e-08 61.6 137 32.1
Thecc.02G129600 Theobroma cacao HOM05D000042 ORTHO05D001427 8.5e-08 61.6 100 37.0
CiPaw.07G166000 Carya illinoinensis HOM05D000042 ORTHO05D001427 1.1e-07 61.2 134 33.6
Gorai.002G142700 Gossypium raimondii HOM05D000042 ORTHO05D001427 1.1e-07 61.2 73 46.6
Gorai.005G225500 Gossypium raimondii HOM05D000042 ORTHO05D001427 1.1e-07 61.2 63 49.2
TWI56G0539 Tripterygium wilfordii HOM05D000042 ORTHO05D001427 1.1e-07 61.2 136 32.4
Duzib052G1115 Durio zibethinus HOM05D000042 ORTHO05D001427 1.4e-07 60.8 68 45.6
Dinv15994 Davidia involucrata HOM05D000042 ORTHO05D001427 2.5e-07 60.1 131 31.3
Gohir.D02G200900 Gossypium hirsutum HOM05D000042 ORTHO05D001427 2.5e-07 60.1 61 50.8
HanXRQChr09g0270841 Helianthus annuus HOM05D000042 ORTHO05D001427 2.5e-07 60.1 66 47.0
Sabra02G0082900 Salix brachista HOM05D000042 ORTHO05D001427 2.5e-07 60.1 119 32.8
Hma1.2p1_1093F.1_g256190 Hydrangea macrophylla HOM05D000042 ORTHO05D001427 3.2e-07 59.7 65 46.2
SGA_v2.0_scaffold83G26372 Striga asiatica HOM05D000042 ORTHO05D001427 4.2e-07 59.3 66 51.5
CSS0003691 Camellia sinensis var. sinensis HOM05D000042 ORTHO05D001427 5.5e-07 58.9 134 33.6
Gohir.A13G051200 Gossypium hirsutum HOM05D000042 ORTHO05D001427 5.5e-07 58.9 148 31.8
QL11p024294 Quercus lobata HOM05D000042 ORTHO05D001427 5.5e-07 58.9 151 29.8
Eucgr.F00420 Eucalyptus grandis HOM05D000042 ORTHO05D001427 7.2e-07 58.5 128 34.4
Potri.017G044200 Populus trichocarpa HOM05D000042 ORTHO05D001427 7.2e-07 58.5 97 34.0
QL11p024222 Quercus lobata HOM05D000042 ORTHO05D001427 7.2e-07 58.5 151 29.1
Rhsim11G0144300 Rhododendron simsii HOM05D000042 ORTHO05D001427 7.2e-07 58.5 98 38.8
FAN04G2310 Fragaria x ananassa HOM05D000042 ORTHO05D001427 9.3e-07 58.2 65 46.2
FAN08G1870 Fragaria x ananassa HOM05D000042 ORTHO05D001427 9.3e-07 58.2 65 46.2
FAN13G1912 Fragaria x ananassa HOM05D000042 ORTHO05D029509 9.3e-07 58.2 65 46.2
Potri.007G115200 Populus trichocarpa HOM05D000042 ORTHO05D001427 9.3e-07 58.2 165 27.3
Manes.10G099000 Manihot esculenta HOM05D000042 ORTHO05D001427 1.2e-06 57.8 127 30.7
Nn5g29891 Nelumbo nucifera HOM05D000042 ORTHO05D001427 1.2e-06 57.8 149 30.9
Actinidia10277 Actinidia chinensis HOM05D000042 ORTHO05D001427 1.6e-06 57.4 145 33.1
BraA09t41135Z Brassica rapa HOM05D000042 ORTHO05D001427 1.6e-06 57.4 72 40.3
Duzib093G0029 Durio zibethinus HOM05D000042 ORTHO05D001427 1.6e-06 57.4 71 38.0
FvH4_5g35400 Fragaria vesca HOM05D000042 ORTHO05D001427 1.6e-06 57.4 65 46.2
Oeu042999.1 Olea europaea HOM05D001574 ORTHO05D000708 1.6e-06 57.4 82 39.0
Prupe.1G531600 Prunus persica HOM05D000042 ORTHO05D001427 1.6e-06 57.4 68 42.6
SalBow8G4214 Salvia bowleyana HOM05D000042 ORTHO05D031641 1.6e-06 57.4 145 33.1
THA.LOC104801710 Tarenaya hassleriana HOM05D000042 ORTHO05D001427 1.6e-06 57.4 62 48.4
BcaB08g35097 Brassica carinata HOM05D000042 ORTHO05D001427 2.1e-06 57.0 72 40.3
ClCG08G011690 Citrullus lanatus HOM05D001292 ORTHO05D001202 2.1e-06 57.0 167 26.9
Haze_10525 Corylus avellana HOM05D000042 ORTHO05D001427 2.1e-06 57.0 107 32.7
ECA246G4305 Erigeron canadensis HOM05D000042 ORTHO05D001427 2.1e-06 57.0 60 46.7
Gohir.D13G049800 Gossypium hirsutum HOM05D000042 ORTHO05D001427 2.1e-06 57.0 148 31.1
Nn1g05562 Nelumbo nucifera HOM05D000042 ORTHO05D001427 2.1e-06 57.0 66 43.9
GSVIVG01005934001 Vitis vinifera HOM05D000042 ORTHO05D001427 2.1e-06 57.0 152 29.6
Actinidia00301 Actinidia chinensis HOM05D000042 ORTHO05D001427 2.7e-06 56.6 66 43.9
HanXRQChr05g0163381 Helianthus annuus HOM05D000042 ORTHO05D001427 2.7e-06 56.6 69 44.9
PGR042G3870 Punica granatum HOM05D000042 ORTHO05D001427 2.7e-06 56.6 155 30.3
SGA_v2.0_scaffold31G12922 Striga asiatica HOM05D000042 ORTHO05D031641 2.7e-06 56.6 47 61.7
BolC1t01913H Brassica oleracea HOM05D000042 ORTHO05D001427 3.6e-06 56.2 130 32.3
CDE10G1272 Ceratophyllum demersum HOM05D000042 ORTHO05D001427 3.6e-06 56.2 65 43.1
COL.COLO4_35239 Corchorus olitorius HOM05D000042 ORTHO05D001427 3.6e-06 56.2 62 41.9
Gohir.A01G132100 Gossypium hirsutum HOM05D000042 ORTHO05D001427 3.6e-06 56.2 69 42.0
Gohir.D01G117300 Gossypium hirsutum HOM05D000042 ORTHO05D001427 3.6e-06 56.2 151 31.8
Manes.02G145300 Manihot esculenta HOM05D000042 ORTHO05D001427 3.6e-06 56.2 97 37.1
Sabra17G0030200 Salix brachista HOM05D000042 ORTHO05D001427 3.6e-06 56.2 133 27.8
SalBow8G1950 Salvia bowleyana HOM05D000042 ORTHO05D001427 3.6e-06 56.2 71 40.8
Sed0012619 Sechium edule HOM05D000042 ORTHO05D001427 3.6e-06 56.2 68 38.2
MELO3C011093.2 Cucumis melo HOM05D000042 ORTHO05D001427 4.6e-06 55.8 140 30.0
DCAR_014188 Daucus carota HOM05D000042 ORTHO05D001427 4.6e-06 55.8 61 42.6
Glyma.13G257000 Glycine max HOM05D000042 ORTHO05D001427 4.6e-06 55.8 142 31.0
Lj4g0022839 Lotus japonicus HOM05D000042 ORTHO05D001427 4.6e-06 55.8 150 31.3
Potri.007G115100 Populus trichocarpa HOM05D000042 ORTHO05D001427 4.6e-06 55.8 99 34.3
Sp4g01590 Schrenkiella parvula HOM05D000042 ORTHO05D001427 4.6e-06 55.8 72 38.9
Sc23g0000710 Simmondsia chinensis HOM05D000042 ORTHO05D001427 4.6e-06 55.8 127 31.5
CiPaw.05G029800 Carya illinoinensis HOM05D000042 ORTHO05D001427 6.1e-06 55.5 128 31.2
CDE10G1031 Ceratophyllum demersum HOM05D000042 ORTHO05D001427 6.1e-06 55.5 64 43.8
Gorai.013G055700 Gossypium raimondii HOM05D000042 ORTHO05D001427 6.1e-06 55.5 142 31.7
HanXRQChr15g0484901 Helianthus annuus HOM05D000042 ORTHO05D001427 6.1e-06 55.5 148 29.7
Manes.12G126800 Manihot esculenta HOM05D000042 ORTHO05D001427 6.1e-06 55.5 141 31.2
PSO017G0006 Papaver somniferum HOM05D000042 ORTHO05D001427 6.1e-06 55.5 66 42.4
PSO170G2966 Papaver somniferum HOM05D000042 ORTHO05D001427 6.1e-06 55.5 66 42.4
Prupe.1G531700 Prunus persica HOM05D000042 ORTHO05D001427 6.1e-06 55.5 68 42.6
Sabra07G0008300 Salix brachista HOM05D000042 ORTHO05D001427 6.1e-06 55.5 144 32.6
THA.LOC104799797 Tarenaya hassleriana HOM05D000042 ORTHO05D001427 6.1e-06 55.5 63 46.0
VMungo0251G0149 Vigna mungo HOM05D009191 ORTHO05D001427 6.1e-06 55.5 69 39.1
C01p19850 Brassica napus HOM05D000076 ORTHO05D003143 7.9e-06 55.1 129 32.6
Duzib041G0217 Durio zibethinus HOM05D000042 ORTHO05D001427 7.9e-06 55.1 62 41.9
THA.LOC104824912 Tarenaya hassleriana HOM05D000042 ORTHO05D001427 7.9e-06 55.1 99 37.4
vmacro04655 Vaccinium macrocarpon HOM05D000042 ORTHO05D001427 7.9e-06 55.1 158 27.2


User provided reference genes

Program Settings