Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G1431 Salvia bowleyana HOM05D004622 ORTHO05D005431 8.1e-74 280.4 152 100.0
SalBow6G5234 Salvia bowleyana HOM05D004622 ORTHO05D005431 1.8e-57 226.1 147 80.3
Oeu035435.1 Olea europaea HOM05D004622 ORTHO05D005431 7.2e-22 107.8 151 44.4
Migut.N02485 Erythranthe guttata HOM05D004622 ORTHO05D005431 2.8e-21 105.9 128 45.3
ClCG01G012170 Citrullus lanatus HOM05D004622 ORTHO05D005431 3.6e-21 105.5 128 50.0
CSS0048557 Camellia sinensis var. sinensis HOM05D004622 ORTHO05D005431 6.1e-21 104.8 126 47.6
Oeu034007.1 Olea europaea HOM05D004622 ORTHO05D005431 3.0e-20 102.4 157 43.9
Migut.D02437 Erythranthe guttata HOM05D004622 ORTHO05D005431 5.2e-20 101.7 127 44.1
MSTRG.21036 Avicennia marina HOM05D004622 ORTHO05D005431 1.5e-19 100.1 156 42.9
MELO3C004685.2 Cucumis melo HOM05D004622 ORTHO05D005431 2.6e-19 99.4 126 47.6
Actinidia07251 Actinidia chinensis HOM05D000892 ORTHO05D005431 3.4e-19 99.0 129 44.2
CSS0039489 Camellia sinensis var. sinensis HOM05D004622 ORTHO05D005431 3.4e-19 99.0 148 42.6
CsaV3_1G015000 Cucumis sativus L. HOM05D004622 ORTHO05D005431 9.8e-19 97.4 126 48.4
CsaV3_1G015910 Cucumis sativus L. HOM05D004622 ORTHO05D005431 9.8e-19 97.4 126 48.4
MSTRG.18765 Avicennia marina HOM05D004622 ORTHO05D005431 3.7e-18 95.5 155 40.0
CANSAT54G2229 Cannabis sativa HOM05D004622 ORTHO05D005431 8.3e-18 94.4 128 45.3
Cfa010005 Carpinus fangiana HOM05D004622 ORTHO05D005431 1.4e-17 93.6 124 48.4
Haze_23364 Corylus avellana HOM05D004622 ORTHO05D005431 1.8e-17 93.2 122 50.0
CiPaw.13G134900 Carya illinoinensis HOM05D004622 ORTHO05D005431 3.1e-17 92.4 153 41.8
Manes.04G003000 Manihot esculenta HOM05D004622 ORTHO05D005431 3.1e-17 92.4 158 40.5
Actinidia24220 Actinidia chinensis HOM05D004622 ORTHO05D005431 1.2e-16 90.5 127 40.9
unitig_0.g1476 Utricularia gibba HOM05D000020 ORTHO05D000543 1.2e-16 90.5 112 47.3
Sabra09G0127000 Salix brachista HOM05D004622 ORTHO05D005431 3.5e-16 89.0 156 37.8
TAR636G1327 Trochodendron aralioides HOM05D004622 ORTHO05D005431 3.5e-16 89.0 154 35.1
Potri.009G162800 Populus trichocarpa HOM05D004622 ORTHO05D005431 4.5e-16 88.6 143 39.9
QL01p012122 Quercus lobata HOM05D004622 ORTHO05D005431 4.5e-16 88.6 147 41.5
Rhsim13G0112300 Rhododendron simsii HOM05D004622 ORTHO05D005431 5.9e-16 88.2 124 45.2
Glyma.13G315900 Glycine max HOM05D004622 ORTHO05D005431 7.8e-16 87.8 113 48.7
Peaxi162Scf00040g00012 Petunia axillaris HOM05D004622 ORTHO05D005431 7.8e-16 87.8 167 35.9
Rhsim01G0204900 Rhododendron simsii HOM05D004622 ORTHO05D005431 7.8e-16 87.8 136 39.7
Cpa.g.sc195.5 Carica papaya HOM05D004622 ORTHO05D005431 2.3e-15 86.3 124 41.9
Thecc.09G281500 Theobroma cacao HOM05D004622 ORTHO05D005431 2.9e-15 85.9 159 37.7
DCAR_010339 Daucus carota HOM05D004622 ORTHO05D005431 3.8e-15 85.5 136 42.6
AUR62009747 Chenopodium quinoa HOM05D004622 ORTHO05D005431 8.6e-15 84.3 151 40.4
PGSC0003DMG400026354 Solanum tuberosum HOM05D004622 ORTHO05D005431 1.1e-14 84.0 180 33.9
Cpa.g.sc195.4 Carica papaya HOM05D004622 ORTHO05D005431 1.5e-14 83.6 133 39.8
Ca_01655_v3 Cicer arietinum L. HOM05D004622 ORTHO05D005431 1.5e-14 83.6 140 39.3
Manes.11G162600 Manihot esculenta HOM05D004622 ORTHO05D005431 1.5e-14 83.6 151 40.4
MD03G1147600 Malus domestica HOM05D004622 ORTHO05D005431 1.9e-14 83.2 157 40.8
Potri.004G201500 Populus trichocarpa HOM05D004622 ORTHO05D005431 1.9e-14 83.2 158 39.2
Solyc11g068530.1 Solanum lycopersicum HOM05D004622 ORTHO05D005431 1.9e-14 83.2 180 35.0
Sopen11g027250 Solanum pennellii HOM05D004622 ORTHO05D005431 2.5e-14 82.8 180 34.4
Cc01_g09000 Coffea canephora HOM05D004622 ORTHO05D005431 3.3e-14 82.4 160 36.2
Duzib170G0788 Durio zibethinus HOM05D004622 ORTHO05D005431 3.3e-14 82.4 153 36.6
DCAR_012203 Daucus carota HOM05D004622 ORTHO05D005431 4.3e-14 82.0 142 42.3
Duzib168G0112 Durio zibethinus HOM05D004622 ORTHO05D005431 5.6e-14 81.6 152 35.5
MBI17_g08325_MAGBIO Magnolia biondii HOM05D004622 ORTHO05D005431 7.3e-14 81.3 156 35.3
MSTRG.12372 Avicennia marina HOM05D004622 ORTHO05D005431 9.5e-14 80.9 192 32.3
AUR62036198 Chenopodium quinoa HOM05D004622 ORTHO05D005431 1.6e-13 80.1 152 39.5
Glyma.12G185600 Glycine max HOM05D004622 ORTHO05D005431 1.6e-13 80.1 119 42.9
Lj2C965T2 Lonicera japonica HOM05D004622 ORTHO05D005431 1.6e-13 80.1 157 36.9
Medtr2g086590 Medicago truncatula HOM05D004622 ORTHO05D005431 2.1e-13 79.7 131 41.2
EL10Ac7g15833 Beta vulgaris HOM05D004622 ORTHO05D005431 2.8e-13 79.3 160 35.0
TAR633G0983 Trochodendron aralioides HOM05D004622 ORTHO05D005431 3.6e-13 79.0 153 35.3
Gohir.A07G110600 Gossypium hirsutum HOM05D004622 ORTHO05D005431 6.1e-13 78.2 128 44.5
Prupe.6G132300 Prunus persica HOM05D004622 ORTHO05D005431 6.1e-13 78.2 159 38.4
Nitab4.5_0000755g0020 Nicotiana tabacum HOM05D004622 ORTHO05D005431 8.0e-13 77.8 176 33.5
PGSC0003DMG400005882 Solanum tuberosum HOM05D004622 ORTHO05D005431 8.0e-13 77.8 153 35.3
Gohir.D07G114300 Gossypium hirsutum HOM05D004622 ORTHO05D005431 1.0e-12 77.4 130 43.8
MD11G1166300 Malus domestica HOM05D004622 ORTHO05D005431 1.0e-12 77.4 156 39.1
Nn2g14192 Nelumbo nucifera HOM05D004622 ORTHO05D005431 1.0e-12 77.4 164 32.9
TPR.G4535 Trifolium pratense HOM05D004622 ORTHO05D005431 1.0e-12 77.4 144 38.2
arahy.Tifrunner.gnm1.ann1.72VZ3I Arachis hypogaea HOM05D004622 ORTHO05D005431 1.4e-12 77.0 121 42.1
SGA_v2.0_scaffold22G09855 Striga asiatica HOM05D004622 ORTHO05D005431 1.4e-12 77.0 122 41.8
Phvul.005G123200 Phaseolus vulgaris HOM05D004622 ORTHO05D005431 3.0e-12 75.9 111 45.0
RcHm_v2.0_Chr5g0045661 Rosa chinensis HOM05D004622 ORTHO05D005431 3.0e-12 75.9 153 37.9
RcHm_v2.0_Chr5g0046341 Rosa chinensis HOM05D004622 ORTHO05D005431 3.0e-12 75.9 153 37.9
FvH4_3g25120 Fragaria vesca HOM05D004622 ORTHO05D005431 4.0e-12 75.5 152 38.2
FAN11G1623 Fragaria x ananassa HOM05D004622 ORTHO05D005431 4.0e-12 75.5 152 38.2
FAN21G1025 Fragaria x ananassa HOM05D004622 ORTHO05D005431 4.0e-12 75.5 152 38.2
FAN25G2155 Fragaria x ananassa HOM05D004622 ORTHO05D005431 4.0e-12 75.5 152 38.2
Aqoxy2G01109 Aquilegia oxysepala HOM05D004622 ORTHO05D005431 6.8e-12 74.7 142 35.9
Nitab4.5_0006738g0040 Nicotiana tabacum HOM05D004622 ORTHO05D005431 6.8e-12 74.7 183 32.2
CiPaw.14G099300 Carya illinoinensis HOM05D004622 ORTHO05D005431 8.9e-12 74.3 153 39.2
Psat5g258080 Pisum sativum HOM05D004622 ORTHO05D005431 1.2e-11 73.9 141 36.9
CAN.G1524.7 Capsicum annuum HOM05D004622 ORTHO05D005431 1.5e-11 73.6 179 33.0
CAN.G919.33 Capsicum annuum HOM05D004622 ORTHO05D005431 2.0e-11 73.2 153 34.6
PSO339G0545 Papaver somniferum HOM05D004622 ORTHO05D005431 3.4e-11 72.4 155 35.5
TWI79G1499 Tripterygium wilfordii HOM05D004622 ORTHO05D005431 3.4e-11 72.4 150 36.7
PSO384G0540 Papaver somniferum HOM05D004622 ORTHO05D005431 4.4e-11 72.0 155 35.5
Lj3g0018609 Lotus japonicus HOM05D004622 ORTHO05D005431 5.7e-11 71.6 163 35.6
Lsat_1_v5_gn_2_59400 Lactuca sativa HOM05D004622 ORTHO05D005431 1.3e-10 70.5 102 42.2
Sopen06g030720 Solanum pennellii HOM05D004622 ORTHO05D005431 1.3e-10 70.5 154 34.4
Lalb_Chr03g0028141 Lupinus albus HOM05D004622 ORTHO05D005431 1.7e-10 70.1 136 39.0
VMungo1080G1565 Vigna mungo HOM05D004622 ORTHO05D005431 1.7e-10 70.1 111 41.4
Solyc06g074270.1 Solanum lycopersicum HOM05D004622 ORTHO05D005431 2.9e-10 69.3 153 33.3
Glyma.11G182500 Glycine max HOM05D004622 ORTHO05D005431 8.3e-10 67.8 112 40.2
Ciclev10028879m.g Citrus clementina HOM05D004622 ORTHO05D005431 1.1e-09 67.4 158 34.8
Glyma.12G090100 Glycine max HOM05D004622 ORTHO05D005431 2.4e-09 66.2 111 37.8
TWI31G0739 Tripterygium wilfordii HOM05D004622 ORTHO05D005431 2.4e-09 66.2 148 34.5
Gorai.001G122600 Gossypium raimondii HOM05D004622 ORTHO05D005431 3.2e-09 65.9 125 43.2
THA.LOC104799551 Tarenaya hassleriana HOM05D004622 ORTHO05D005431 9.2e-09 64.3 116 41.4
HPP92_009743 Vanilla planifolia HOM05D004622 ORTHO05D005431 1.2e-08 63.9 103 39.8
Gohir.A09G096001 Gossypium hirsutum HOM05D004622 ORTHO05D005431 2.0e-08 63.2 117 35.9
PGR102G1757 Punica granatum HOM05D004622 ORTHO05D005431 2.7e-08 62.8 143 33.6
Gohir.D09G095666 Gossypium hirsutum HOM05D004622 ORTHO05D005431 4.6e-08 62.0 117 35.9
Os11g0153500 Oryza sativa ssp. japonica HOM05D004622 ORTHO05D005431 5.9e-08 61.6 54 53.7
Zm00001eb092610 Zea mays HOM05D004622 ORTHO05D005431 2.3e-07 59.7 148 35.1
Thhalv10014710m.g Eutrema salsugineum HOM05D004622 ORTHO05D005431 5.0e-07 58.5 113 38.9
HPP92_006359 Vanilla planifolia HOM05D004622 ORTHO05D005431 5.0e-07 58.5 103 34.0
Aqoxy4G02755 Aquilegia oxysepala HOM05D004622 ORTHO05D005431 2.5e-06 56.2 73 42.5
PSO801G0264 Papaver somniferum HOM05D004622 ORTHO05D005431 2.5e-06 56.2 158 31.6
DCAR_000195 Daucus carota HOM05D004622 ORTHO05D005431 4.3e-06 55.5 127 36.2
AL6G33410 Arabidopsis lyrata HOM05D004622 ORTHO05D005431 5.6e-06 55.1 113 34.5
CDE12G0371 Ceratophyllum demersum HOM05D004622 ORTHO05D005431 5.6e-06 55.1 141 31.2
Sed0001344 Sechium edule HOM05D004622 ORTHO05D005431 7.3e-06 54.7 109 36.7
Sp6g22860 Schrenkiella parvula HOM05D004622 ORTHO05D005431 9.5e-06 54.3 121 35.5


User provided reference genes

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