Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G1307 Salvia bowleyana HOM05D007039 ORTHO05D008886 7.6e-138 493.8 245 100.0
Migut.F00878 Erythranthe guttata HOM05D007039 ORTHO05D008886 1.2e-111 406.8 241 81.7
Oeu025598.1 Olea europaea HOM05D007039 ORTHO05D008886 2.1e-111 406.0 240 81.7
SGA_v2.0_scaffold62G21336 Striga asiatica HOM05D007039 ORTHO05D008886 6.0e-111 404.4 243 80.7
CiPaw.14G032800 Carya illinoinensis HOM05D007039 ORTHO05D008886 2.1e-108 396.0 240 77.5
Cc02_g09650 Coffea canephora HOM05D007039 ORTHO05D008886 4.0e-107 391.7 244 76.2
Rhsim09G0142000 Rhododendron simsii HOM05D007039 ORTHO05D008886 1.5e-106 389.8 244 76.6
PGSC0003DMG400016998 Solanum tuberosum HOM05D007039 ORTHO05D008886 1.0e-105 387.1 240 77.5
CAN.G186.55 Capsicum annuum HOM05D007039 ORTHO05D008886 1.7e-105 386.3 240 77.9
TWI63G1767 Tripterygium wilfordii HOM05D007039 ORTHO05D008886 3.8e-105 385.2 239 76.2
Sopen04g004820 Solanum pennellii HOM05D007039 ORTHO05D008886 1.1e-104 383.6 240 76.7
Solyc04g009700.3 Solanum lycopersicum HOM05D007039 ORTHO05D008886 5.5e-104 381.3 240 75.8
Manes.07G087400 Manihot esculenta HOM05D007039 ORTHO05D008886 7.1e-104 380.9 242 74.0
Cfa011268 Carpinus fangiana HOM05D007039 ORTHO05D008886 2.7e-103 379.0 240 73.8
HanXRQChr08g0217501 Helianthus annuus HOM05D007039 ORTHO05D008886 6.0e-103 377.9 239 74.5
Prupe.2G067300 Prunus persica HOM05D007039 ORTHO05D008886 7.9e-103 377.5 242 75.2
GSVIVG01001001001 Vitis vinifera HOM05D007039 ORTHO05D008886 7.9e-103 377.5 240 74.2
Oeu036842.1 Olea europaea HOM05D007039 ORTHO05D008886 1.0e-102 377.1 240 75.8
Eucgr.J00258 Eucalyptus grandis HOM05D007039 ORTHO05D008886 1.3e-102 376.7 242 75.6
Lj2A32T31 Lonicera japonica HOM05D007039 ORTHO05D008886 2.3e-102 375.9 240 75.8
Potri.008G020500 Populus trichocarpa HOM05D007039 ORTHO05D008886 3.0e-102 375.6 238 74.8
Atru.chr12.1023 Acer truncatum HOM05D007039 ORTHO05D008886 5.1e-102 374.8 244 73.0
Lsat_1_v5_gn_8_24101 Lactuca sativa HOM05D007039 ORTHO05D008886 6.7e-102 374.4 239 73.6
Dinv11837 Davidia involucrata HOM05D007039 ORTHO05D008886 8.7e-102 374.0 240 75.0
RcHm_v2.0_Chr1g0331721 Rosa chinensis HOM05D007039 ORTHO05D008886 8.7e-102 374.0 243 74.5
CSS0047124 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 1.5e-101 373.2 240 74.6
Potri.010G238700 Populus trichocarpa HOM05D007039 ORTHO05D008886 2.5e-101 372.5 239 74.1
Ca_25665_v3 Cicer arietinum L. HOM05D007039 ORTHO05D008886 4.3e-101 371.7 241 75.1
arahy.Tifrunner.gnm1.ann1.2NV5LW Arachis hypogaea HOM05D007039 ORTHO05D008886 9.6e-101 370.5 241 73.4
CANSAT56G1368 Cannabis sativa HOM05D007039 ORTHO05D008886 9.6e-101 370.5 243 72.8
arahy.Tifrunner.gnm1.ann1.XC1RGZ Arachis hypogaea HOM05D007039 ORTHO05D008886 1.6e-100 369.8 241 73.4
MD02G1261300 Malus domestica HOM05D007039 ORTHO05D008886 1.6e-100 369.8 240 75.0
Sabra10G0186900 Salix brachista HOM05D007039 ORTHO05D008886 2.1e-100 369.4 240 72.9
vmacro10308 Vaccinium macrocarpon HOM05D007039 ORTHO05D008886 2.1e-100 369.4 290 64.5
CSS0023700 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 1.4e-99 366.7 240 73.8
Thecc.07G140700 Theobroma cacao HOM05D007039 ORTHO05D008886 1.4e-99 366.7 240 73.3
Psat6g231000 Pisum sativum HOM05D007039 ORTHO05D008886 3.1e-99 365.5 242 74.4
TPR.G2471 Trifolium pratense HOM05D007039 ORTHO05D008886 3.1e-99 365.5 240 73.3
FAN06G3803 Fragaria x ananassa HOM05D007039 ORTHO05D008886 9.0e-99 364.0 243 72.0
Glyma.20G110700 Glycine max HOM05D007039 ORTHO05D008886 4.5e-98 361.7 241 71.8
FAN01G2006 Fragaria x ananassa HOM05D007039 ORTHO05D008886 5.9e-98 361.3 243 72.0
unitig_748.g8774 Utricularia gibba HOM05D007039 ORTHO05D008886 5.9e-98 361.3 241 72.2
FAN03G1588 Fragaria x ananassa HOM05D007039 ORTHO05D008886 7.6e-98 360.9 243 71.2
Medtr1g112080 Medicago truncatula HOM05D007039 ORTHO05D008886 7.6e-98 360.9 240 72.5
Phvul.007G022300 Phaseolus vulgaris HOM05D007039 ORTHO05D008886 7.6e-98 360.9 241 71.0
VMungo0720G0617 Vigna mungo HOM05D007039 ORTHO05D008886 7.6e-98 360.9 241 70.5
Lalb_Chr06g0166411 Lupinus albus HOM05D007039 ORTHO05D008886 1.3e-97 360.1 240 71.7
Hund22275 Selenicereus undatus HOM05D007039 ORTHO05D008886 1.7e-97 359.8 237 72.6
Ciclev10016452m.g Citrus clementina HOM05D007039 ORTHO05D008886 1.1e-96 357.1 240 70.8
QL04p044873 Quercus lobata HOM05D007039 ORTHO05D008886 2.5e-96 355.9 243 70.0
Duzib106G1061 Durio zibethinus HOM05D007039 ORTHO05D008886 7.2e-96 354.4 243 69.1
TAR623G0720 Trochodendron aralioides HOM05D007039 ORTHO05D008886 4.6e-95 351.7 239 69.9
FAN10G1571 Fragaria x ananassa HOM05D007039 ORTHO05D008886 7.9e-95 350.9 257 67.7
COL.COLO4_17444 Corchorus olitorius HOM05D007039 ORTHO05D008886 1.3e-94 350.1 240 70.4
MD07G1059500 Malus domestica HOM05D007039 ORTHO05D008886 1.3e-94 350.1 240 71.7
THA.LOC104801579 Tarenaya hassleriana HOM05D007039 ORTHO05D008886 3.9e-94 348.6 241 66.8
Gohir.A06G173100 Gossypium hirsutum HOM05D007039 ORTHO05D008886 8.7e-94 347.4 240 68.8
Sc20g0001160 Simmondsia chinensis HOM05D007039 ORTHO05D008886 1.9e-93 346.3 242 68.2
Gorai.010G214000 Gossypium raimondii HOM05D007039 ORTHO05D008886 3.3e-93 345.5 240 68.8
Nitab4.5_0003927g0060 Nicotiana tabacum HOM05D007039 ORTHO05D008886 4.3e-93 345.1 241 71.8
Gorai.010G214100 Gossypium raimondii HOM05D007039 ORTHO05D008886 5.7e-93 344.7 240 68.8
AUR62041513 Chenopodium quinoa HOM05D007039 ORTHO05D008886 9.7e-93 344.0 244 67.2
Lj5g0024269 Lotus japonicus HOM05D007039 ORTHO05D008886 9.7e-93 344.0 237 70.9
Gohir.D06G183100 Gossypium hirsutum HOM05D007039 ORTHO05D008886 1.6e-92 343.2 240 68.8
Gohir.D06G182700 Gossypium hirsutum HOM05D007039 ORTHO05D008886 2.8e-92 342.4 240 68.3
Gohir.D06G183000 Gossypium hirsutum HOM05D007039 ORTHO05D008886 1.8e-91 339.7 240 67.9
Peaxi162Scf00195g01020 Petunia axillaris HOM05D007039 ORTHO05D008886 6.9e-91 337.8 241 70.1
Aqoxy2G01207 Aquilegia oxysepala HOM05D007039 ORTHO05D008886 3.4e-90 335.5 237 67.1
Nn6g34917 Nelumbo nucifera HOM05D007039 ORTHO05D008886 4.5e-90 335.1 239 66.9
AUR62042080 Chenopodium quinoa HOM05D007039 ORTHO05D008886 3.8e-89 332.0 227 68.3
EL10Ac4g08687 Beta vulgaris HOM05D007039 ORTHO05D008886 6.5e-89 331.3 236 68.2
MELO3C019894.2 Cucumis melo HOM05D007039 ORTHO05D008886 1.1e-88 330.5 241 68.0
Sed0014501 Sechium edule HOM05D007039 ORTHO05D008886 4.2e-88 328.6 241 68.0
HPP92_006806 Vanilla planifolia HOM05D007039 ORTHO05D008886 2.7e-87 325.9 242 64.5
PSO339G1176 Papaver somniferum HOM05D007039 ORTHO05D008886 4.6e-87 325.1 238 65.1
Ah.06g186600 Amaranthus hybridus HOM05D007039 ORTHO05D008886 7.9e-87 324.3 244 65.2
Os01g0859400 Oryza sativa ssp. japonica HOM05D007039 ORTHO05D008886 7.9e-87 324.3 244 62.7
PSO384G1372 Papaver somniferum HOM05D007039 ORTHO05D008886 2.3e-86 322.8 238 64.7
ClCG08G008260 Citrullus lanatus HOM05D007039 ORTHO05D008886 1.7e-84 316.6 276 60.1
Zm00001eb366890 Zea mays HOM05D007039 ORTHO05D008886 8.2e-84 314.3 244 61.5
Zm00001eb147230 Zea mays HOM05D007039 ORTHO05D008886 1.1e-83 313.9 244 61.9
Dinv09617 Davidia involucrata HOM05D007039 ORTHO05D008886 5.5e-80 301.6 240 65.4
MSTRG.9060 Avicennia marina HOM05D007039 ORTHO05D008886 7.2e-80 301.2 182 75.8
Cpa.g.sc56.15 Carica papaya HOM05D007039 ORTHO05D008886 9.4e-80 300.8 183 73.2
TAR633G1803 Trochodendron aralioides HOM05D007039 ORTHO05D008886 3.0e-78 295.8 236 59.7
ECA233G2799 Erigeron canadensis HOM05D007039 ORTHO05D008886 4.1e-75 285.4 187 72.2
HPP92_009768 Vanilla planifolia HOM05D007039 ORTHO05D008886 4.1e-75 285.4 232 56.5
Oeu036841.1 Olea europaea HOM05D007039 ORTHO05D008886 1.6e-74 283.5 182 74.2
HPP92_009745 Vanilla planifolia HOM05D007039 ORTHO05D008886 2.0e-74 283.1 232 56.0
PGSC0003DMG400023289 Solanum tuberosum HOM05D007039 ORTHO05D008886 1.1e-72 277.3 183 72.1
Glyma.10G279000 Glycine max HOM05D007039 ORTHO05D008886 1.5e-72 276.9 238 60.5
FvH4_7g05130 Fragaria vesca HOM05D007039 ORTHO05D008886 9.7e-69 264.2 182 69.2
Eucgr.J00257 Eucalyptus grandis HOM05D007039 ORTHO05D008886 4.8e-68 261.9 182 70.3
Zm00001eb092690 Zea mays HOM05D007039 ORTHO05D008886 5.3e-67 258.5 239 49.8
Os12g0152800 Oryza sativa ssp. japonica HOM05D007039 ORTHO05D008886 7.7e-66 254.6 238 50.0
PGR142G0235 Punica granatum HOM05D007039 ORTHO05D008886 1.7e-65 253.4 181 66.9
CSS0008887 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 1.6e-63 246.9 209 61.2
Mapoly0010s0050 Marchantia polymorpha HOM05D007039 ORTHO05D008886 2.7e-63 246.1 234 50.9
CsaV3_6G004220 Cucumis sativus L. HOM05D007039 ORTHO05D008886 1.4e-62 243.8 180 66.7
CBR_g32363 Chara braunii HOM05D007039 ORTHO05D008886 8.3e-60 234.6 208 53.4
Pp3c15_5790 Physcomitrium patens HOM05D007039 ORTHO05D008886 1.7e-57 226.9 230 47.8
AagrBONN_evm.TU.Sc2ySwM_228.3073 Anthoceros agrestis HOM05D007039 ORTHO05D008886 2.9e-57 226.1 215 51.2
SMO367G0592 Selaginella moellendorffii HOM05D007039 ORTHO05D008886 8.6e-57 224.6 229 49.3
CSS0041399 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 1.5e-56 223.8 178 65.2
AagrBONN_evm.TU.Sc2ySwM_362.1562 Anthoceros agrestis HOM05D007039 ORTHO05D008886 5.5e-56 221.9 240 46.2
CDE08G0883 Ceratophyllum demersum HOM05D007039 ORTHO05D008886 8.8e-54 214.5 147 63.3
DCAR_019005 Daucus carota HOM05D007039 ORTHO05D008886 2.8e-47 193.0 109 74.3
Zm00001eb197030 Zea mays HOM05D007039 ORTHO05D008886 8.9e-46 188.0 179 45.3
Nitab4.5_0000691g0070 Nicotiana tabacum HOM05D007039 ORTHO05D008886 7.3e-40 168.3 240 45.8
SMO353G0277 Selaginella moellendorffii HOM05D007039 ORTHO05D008886 2.2e-36 156.8 181 47.0
Cre01.g018100 Chlamydomonas reinhardtii HOM05D007039 ORTHO05D008886 2.8e-31 139.8 207 34.8
MD04G1248500 Malus domestica HOM05D007039 ORTHO05D008886 2.6e-29 133.3 106 66.0
PRCOL_00002076 Prasinoderma coloniale HOM05D007039 ORTHO05D008886 1.1e-19 101.3 120 39.2


User provided reference genes

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