Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G1282 Salvia bowleyana HOM05D001105 ORTHO05D001870 6.2e-76 287.3 142 100.0
Oeu015971.1 Olea europaea HOM05D001105 ORTHO05D001870 2.1e-15 86.3 124 43.5
Migut.O00517 Erythranthe guttata HOM05D001105 ORTHO05D001870 8.0e-15 84.3 170 40.6
COL.COLO4_09100 Corchorus olitorius HOM05D001105 ORTHO05D001870 2.6e-13 79.3 105 47.6
Atru.chr5.1433 Acer truncatum HOM05D001105 ORTHO05D001870 3.4e-13 79.0 101 43.6
Oeu022873.1 Olea europaea HOM05D001105 ORTHO05D001870 3.4e-13 79.0 125 41.6
Cc01_g19510 Coffea canephora HOM05D001105 ORTHO05D001870 5.7e-13 78.2 135 38.5
SGA_v2.0_scaffold11G05808 Striga asiatica HOM05D001105 ORTHO05D001870 9.8e-13 77.4 136 39.7
Duzib138G1156 Durio zibethinus HOM05D001105 ORTHO05D001870 1.3e-12 77.0 107 41.1
Thecc.01G279800 Theobroma cacao HOM05D001105 ORTHO05D001870 1.3e-12 77.0 107 43.0
Peaxi162Scf01607g00012 Petunia axillaris HOM05D001105 ORTHO05D001870 1.7e-12 76.6 149 36.9
Potri.002G053400 Populus trichocarpa HOM05D001105 ORTHO05D001870 2.2e-12 76.3 128 39.1
Duzib133G0922 Durio zibethinus HOM05D001105 ORTHO05D001870 2.8e-12 75.9 107 42.1
Nitab4.5_0000458g0040 Nicotiana tabacum HOM05D001105 ORTHO05D001870 2.8e-12 75.9 126 40.5
SalBow4G2473 Salvia bowleyana HOM05D001105 ORTHO05D001870 2.8e-12 75.9 145 42.1
SGA_v2.0_scaffold1G00470 Striga asiatica HOM05D001105 ORTHO05D001870 2.8e-12 75.9 104 44.2
Gorai.004G080300 Gossypium raimondii HOM05D001105 ORTHO05D001870 6.3e-12 74.7 125 38.4
Actinidia00749 Actinidia chinensis HOM05D001105 ORTHO05D001870 8.3e-12 74.3 140 37.9
Gohir.A08G067600 Gossypium hirsutum HOM05D001105 ORTHO05D001870 8.3e-12 74.3 125 38.4
Gohir.D08G076000 Gossypium hirsutum HOM05D001105 ORTHO05D001870 8.3e-12 74.3 125 38.4
Eucgr.H01483 Eucalyptus grandis HOM05D001105 ORTHO05D001870 1.1e-11 73.9 98 45.9
Lj2P1173T12 Lonicera japonica HOM05D001105 ORTHO05D001870 1.4e-11 73.6 103 49.5
Sabra05G0159200 Salix brachista HOM05D001105 ORTHO05D001870 1.8e-11 73.2 119 37.0
Potri.005G209100 Populus trichocarpa HOM05D001105 ORTHO05D001870 2.4e-11 72.8 104 41.3
TWI59G0570 Tripterygium wilfordii HOM05D001105 ORTHO05D001870 2.4e-11 72.8 112 37.5
Peaxi162Scf00783g00032 Petunia axillaris HOM05D001105 ORTHO05D001870 3.1e-11 72.4 103 40.8
CSS0029817 Camellia sinensis var. sinensis HOM05D001105 ORTHO05D001870 4.1e-11 72.0 109 43.1
Gorai.007G136700 Gossypium raimondii HOM05D001105 ORTHO05D001870 4.1e-11 72.0 109 43.1
Nitab4.5_0003538g0010 Nicotiana tabacum HOM05D001105 ORTHO05D001870 4.1e-11 72.0 101 42.6
SGA_v2.0_scaffold80G25936 Striga asiatica HOM05D001105 ORTHO05D001870 4.1e-11 72.0 145 37.9
TWI14G0758 Tripterygium wilfordii HOM05D001105 ORTHO05D001870 7.0e-11 71.2 109 38.5
Sabra02G0043500 Salix brachista HOM05D001105 ORTHO05D001870 9.2e-11 70.9 128 38.3
Gohir.D11G127800 Gossypium hirsutum HOM05D001105 ORTHO05D001870 1.6e-10 70.1 109 42.2
Rhsim13G0024500 Rhododendron simsii HOM05D001105 ORTHO05D001870 1.6e-10 70.1 106 43.4
unitig_22.g5258 Utricularia gibba HOM05D001105 ORTHO05D001870 2.0e-10 69.7 169 34.3
Duzib211G0127 Durio zibethinus HOM05D001105 ORTHO05D001870 3.5e-10 68.9 107 41.1
CiPaw.08G105300 Carya illinoinensis HOM05D001105 ORTHO05D001870 4.5e-10 68.6 112 39.3
Dinv32938 Davidia involucrata HOM05D001105 ORTHO05D001870 7.8e-10 67.8 108 40.7
Gohir.A11G122500 Gossypium hirsutum HOM05D001105 ORTHO05D001870 7.8e-10 67.8 109 42.2
Ciclev10021186m.g Citrus clementina HOM05D001105 ORTHO05D001870 1.0e-09 67.4 106 42.5
TWI23G0440 Tripterygium wilfordii HOM05D001105 ORTHO05D001870 1.0e-09 67.4 108 38.9
Lsat_1_v5_gn_8_56341 Lactuca sativa HOM05D001105 ORTHO05D001870 1.3e-09 67.0 106 42.5
Manes.05G076000 Manihot esculenta HOM05D001105 ORTHO05D001870 1.3e-09 67.0 110 41.8
Solyc06g008990.1 Solanum lycopersicum HOM05D001105 ORTHO05D001870 1.3e-09 67.0 94 43.6
Sopen06g003770 Solanum pennellii HOM05D001105 ORTHO05D001870 1.3e-09 67.0 94 43.6
Glyma.19G155800 Glycine max HOM05D001105 ORTHO05D001870 1.7e-09 66.6 123 38.2
PGR119G2523 Punica granatum HOM05D001105 ORTHO05D001870 1.7e-09 66.6 110 40.9
Solyc09g065140.1 Solanum lycopersicum HOM05D001105 ORTHO05D001870 2.3e-09 66.2 99 40.4
Cfa006135 Carpinus fangiana HOM05D001105 ORTHO05D001870 2.9e-09 65.9 111 39.6
Lsat_1_v5_gn_5_188280 Lactuca sativa HOM05D001105 ORTHO05D001870 2.9e-09 65.9 109 43.1
Sc05g0004950 Simmondsia chinensis HOM05D001105 ORTHO05D001870 3.8e-09 65.5 111 42.3
DCAR_018418 Daucus carota HOM05D001105 ORTHO05D001870 5.0e-09 65.1 131 35.9
Rhsim04G0204100 Rhododendron simsii HOM05D001105 ORTHO05D001870 5.0e-09 65.1 146 32.2
Ciclev10005417m.g Citrus clementina HOM05D001105 ORTHO05D001870 6.6e-09 64.7 113 38.9
Haze_04713 Corylus avellana HOM05D001105 ORTHO05D001870 6.6e-09 64.7 111 38.7
Migut.O00962 Erythranthe guttata HOM05D001105 ORTHO05D001870 6.6e-09 64.7 140 35.0
Prupe.8G241400 Prunus persica HOM05D001105 ORTHO05D001870 6.6e-09 64.7 132 38.6
Haze_00938 Corylus avellana HOM05D001105 ORTHO05D001870 8.6e-09 64.3 123 35.8
Hma1.2p1_0434F.1_g152200 Hydrangea macrophylla HOM05D001105 ORTHO05D001870 8.6e-09 64.3 110 36.4
Medtr7g094830 Medicago truncatula HOM05D001105 ORTHO05D001870 8.6e-09 64.3 111 39.6
TPR.G9929 Trifolium pratense HOM05D001105 ORTHO05D001870 8.6e-09 64.3 108 38.0
VMungo1215G0742 Vigna mungo HOM05D001105 ORTHO05D001870 8.6e-09 64.3 104 36.5
Rhsim01G0274700 Rhododendron simsii HOM05D001478 ORTHO05D008790 1.1e-08 63.9 110 40.0
CAN.G1006.12 Capsicum annuum HOM05D001105 ORTHO05D001870 1.5e-08 63.5 135 40.0
Eucgr.H01485 Eucalyptus grandis HOM05D001105 ORTHO05D001870 1.5e-08 63.5 98 39.8
Lj1g0015154 Lotus japonicus HOM05D001105 ORTHO05D001870 1.5e-08 63.5 115 39.1
Lalb_Chr02g0142791 Lupinus albus HOM05D001105 ORTHO05D001870 1.5e-08 63.5 110 39.1
DCAR_012473 Daucus carota HOM05D001105 ORTHO05D001870 1.9e-08 63.2 58 55.2
HanXRQChr01g0003151 Helianthus annuus HOM05D001105 ORTHO05D001870 1.9e-08 63.2 110 41.8
Peaxi162Scf00161g00111 Petunia axillaris HOM05D001105 ORTHO05D001870 1.9e-08 63.2 155 33.5
PGSC0003DMG400012882 Solanum tuberosum HOM05D001105 ORTHO05D001870 1.9e-08 63.2 129 34.9
PGSC0003DMG400014641 Solanum tuberosum HOM05D001105 ORTHO05D001870 1.9e-08 63.2 101 39.6
Actinidia09140 Actinidia chinensis HOM05D001105 ORTHO05D001870 2.5e-08 62.8 108 38.0
DCAR_030614 Daucus carota HOM05D001105 ORTHO05D001870 2.5e-08 62.8 129 37.2
Manes.01G207900 Manihot esculenta HOM05D001105 ORTHO05D001870 2.5e-08 62.8 116 37.9
MELO3C014402.2 Cucumis melo HOM05D001105 ORTHO05D001870 3.3e-08 62.4 118 36.4
ECA236G2824 Erigeron canadensis HOM05D001105 ORTHO05D001870 3.3e-08 62.4 131 36.6
Glyma.03G153400 Glycine max HOM05D001105 ORTHO05D001870 3.3e-08 62.4 119 37.8
Ca_08580_v3 Cicer arietinum L. HOM05D001105 ORTHO05D001870 4.3e-08 62.0 101 39.6
PSO302G0035 Papaver somniferum HOM05D001105 ORTHO05D001870 4.3e-08 62.0 125 34.4
Actinidia23497 Actinidia chinensis HOM05D001105 ORTHO05D001870 5.6e-08 61.6 107 36.4
CAN.G1682.22 Capsicum annuum HOM05D001105 ORTHO05D001870 5.6e-08 61.6 129 37.2
Lj5g0002837 Lotus japonicus HOM05D001105 ORTHO05D001870 5.6e-08 61.6 108 38.9
Psat3g065280 Pisum sativum HOM05D001105 ORTHO05D001870 5.6e-08 61.6 114 36.8
Potri.010G091800 Populus trichocarpa HOM05D001105 ORTHO05D001870 5.6e-08 61.6 110 38.2
QL12p021926 Quercus lobata HOM05D001105 ORTHO05D001870 5.6e-08 61.6 117 38.5
VMungo1383G0841 Vigna mungo HOM05D001105 ORTHO05D001870 5.6e-08 61.6 118 36.4
CiPaw.07G091300 Carya illinoinensis HOM05D001105 ORTHO05D001870 7.3e-08 61.2 111 39.6
Cfa015607 Carpinus fangiana HOM05D001105 ORTHO05D001870 9.5e-08 60.8 110 36.4
Lalb_Chr06g0163011 Lupinus albus HOM05D001105 ORTHO05D001870 9.5e-08 60.8 114 36.8
Nitab4.5_0006390g0040 Nicotiana tabacum HOM05D001105 ORTHO05D001870 9.5e-08 60.8 126 34.9
CsaV3_7G028140 Cucumis sativus L. HOM05D001105 ORTHO05D001870 1.2e-07 60.5 157 30.6
PSO170G3767 Papaver somniferum HOM05D001105 ORTHO05D001870 1.6e-07 60.1 125 34.4
Sc13g0004160 Simmondsia chinensis HOM05D001105 ORTHO05D001870 1.6e-07 60.1 109 35.8
Aqoxy5G00506 Aquilegia oxysepala HOM05D001105 ORTHO05D001870 2.1e-07 59.7 112 37.5
MD03G1265600 Malus domestica HOM05D001105 ORTHO05D001870 2.1e-07 59.7 131 35.1
EL10Ac7g17229 Beta vulgaris HOM05D001105 ORTHO05D001870 2.8e-07 59.3 104 39.4
Hma1.2p1_0995F.1_g245700 Hydrangea macrophylla HOM05D001105 ORTHO05D001870 2.8e-07 59.3 101 38.6
Dinv44502 Davidia involucrata HOM05D001105 ORTHO05D001870 3.6e-07 58.9 105 38.1
GSVIVG01024498001 Vitis vinifera HOM05D001105 ORTHO05D001870 3.6e-07 58.9 106 41.5
Oeu004491.1 Olea europaea HOM05D001105 ORTHO05D001870 4.7e-07 58.5 120 34.2
Sabra10G0051500 Salix brachista HOM05D001105 ORTHO05D001870 4.7e-07 58.5 144 36.1
CSS0018072 Camellia sinensis var. sinensis HOM05D001105 ORTHO05D001870 6.1e-07 58.2 119 34.5
CSS0049503 Camellia sinensis var. sinensis HOM05D001105 ORTHO05D001870 6.1e-07 58.2 119 34.5
FvH4_2g23620 Fragaria vesca HOM05D001105 ORTHO05D001870 6.1e-07 58.2 124 35.5
HanXRQChr10g0291611 Helianthus annuus HOM05D001105 ORTHO05D001870 6.1e-07 58.2 108 40.7
Oeu029584.1 Olea europaea HOM05D001105 ORTHO05D001870 6.1e-07 58.2 120 33.3
FAN24G3176 Fragaria x ananassa HOM05D001105 ORTHO05D001870 8.0e-07 57.8 124 34.7
Gohir.D12G004700 Gossypium hirsutum HOM05D001105 ORTHO05D001870 8.0e-07 57.8 135 32.6
Gorai.008G004600 Gossypium raimondii HOM05D001105 ORTHO05D001870 8.0e-07 57.8 135 32.6
MD11G1286200 Malus domestica HOM05D001105 ORTHO05D001870 8.0e-07 57.8 80 43.8
Potri.008G149600 Populus trichocarpa HOM05D001105 ORTHO05D001870 8.0e-07 57.8 111 37.8
Lj1g0027615 Lotus japonicus HOM05D001105 ORTHO05D001870 1.0e-06 57.4 143 33.6
TWI09G1192 Tripterygium wilfordii HOM05D001105 ORTHO05D001870 1.0e-06 57.4 110 33.6
Gohir.A12G005200 Gossypium hirsutum HOM05D001105 ORTHO05D001870 1.4e-06 57.0 135 31.9
Lsat_1_v5_gn_7_66720 Lactuca sativa HOM05D001105 ORTHO05D001870 1.4e-06 57.0 133 30.8
Phvul.001G150800 Phaseolus vulgaris HOM05D001105 ORTHO05D001870 1.4e-06 57.0 154 31.8
TWI73G1145 Tripterygium wilfordii HOM05D001105 ORTHO05D001870 1.8e-06 56.6 107 35.5
ClCG09G007020 Citrullus lanatus HOM05D001105 ORTHO05D001870 2.3e-06 56.2 112 36.6
FAN20G3052 Fragaria x ananassa HOM05D001105 ORTHO05D001870 2.3e-06 56.2 124 33.9
FAN27G2256 Fragaria x ananassa HOM05D001105 ORTHO05D001870 2.3e-06 56.2 124 33.9
FAN27G3210 Fragaria x ananassa HOM05D001105 ORTHO05D001870 2.3e-06 56.2 124 33.9
Manes.03G181900 Manihot esculenta HOM05D001105 ORTHO05D001870 2.3e-06 56.2 103 34.0
Sabra08G0113700 Salix brachista HOM05D001105 ORTHO05D001870 2.3e-06 56.2 112 39.3
GSVIVG01011086001 Vitis vinifera HOM05D001105 ORTHO05D001870 3.0e-06 55.8 64 50.0
Nitab4.5_0000295g0230 Nicotiana tabacum HOM05D001105 ORTHO05D001870 4.0e-06 55.5 143 32.2
Nitab4.5_0008797g0040 Nicotiana tabacum HOM05D001105 ORTHO05D001870 4.0e-06 55.5 111 35.1
Manes.15G025700 Manihot esculenta HOM05D001105 ORTHO05D001870 5.2e-06 55.1 110 34.5
SGA_v2.0_scaffold39G15299 Striga asiatica HOM05D001105 ORTHO05D001870 5.2e-06 55.1 113 35.4
Actinidia36983 Actinidia chinensis HOM05D001105 ORTHO05D001870 6.8e-06 54.7 112 33.9
CsaV3_3G013540 Cucumis sativus L. HOM05D001105 ORTHO05D001870 6.8e-06 54.7 101 35.6
Lsat_1_v5_gn_5_74260 Lactuca sativa HOM05D001105 ORTHO05D001870 6.8e-06 54.7 115 36.5
CSS0044577 Camellia sinensis var. sinensis HOM05D001105 ORTHO05D001870 8.9e-06 54.3 114 33.3
Phvul.007G171900 Phaseolus vulgaris HOM05D001105 ORTHO05D001870 8.9e-06 54.3 109 33.0


User provided reference genes

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