Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G1192 Salvia bowleyana HOM05D005271 ORTHO05D006072 2.6e-50 201.8 107 100.0
SalBow1G3231 Salvia bowleyana HOM05D005271 ORTHO05D006072 5.8e-50 200.7 107 99.1
SGA_v2.0_scaffold149G36579 Striga asiatica HOM05D005271 ORTHO05D006072 1.2e-36 156.4 107 78.5
Migut.N03355 Erythranthe guttata HOM05D005271 ORTHO05D006072 8.1e-36 153.7 107 75.7
MSTRG.22460 Avicennia marina HOM05D005271 ORTHO05D006072 9.0e-35 150.2 107 76.6
Oeu017888.1 Olea europaea HOM05D005271 ORTHO05D006072 1.6e-28 129.4 105 64.8
unitig_0.g914 Utricularia gibba HOM05D000362 ORTHO05D000325 1.6e-28 129.4 107 64.5
Migut.C01265 Erythranthe guttata HOM05D005271 ORTHO05D006072 4.8e-28 127.9 105 66.7
CSS0040197 Camellia sinensis var. sinensis HOM05D005271 ORTHO05D006072 6.2e-28 127.5 105 64.8
Cc10_g11580 Coffea canephora HOM05D005271 ORTHO05D006072 1.1e-27 126.7 105 64.8
Aqoxy1G00251 Aquilegia oxysepala HOM05D005271 ORTHO05D006072 1.8e-27 125.9 106 62.3
vmacro03554 Vaccinium macrocarpon HOM05D005271 ORTHO05D006072 9.0e-27 123.6 105 62.9
Glyma.19G010500 Glycine max HOM05D005271 ORTHO05D006072 1.2e-26 123.2 95 62.1
Rhsim04G0167900 Rhododendron simsii HOM05D005271 ORTHO05D006072 2.0e-26 122.5 105 62.9
Sed0007631 Sechium edule HOM05D005271 ORTHO05D006072 2.0e-26 122.5 105 62.9
Actinidia22429 Actinidia chinensis HOM05D005271 ORTHO05D006072 2.6e-26 122.1 105 63.8
PSO782G3340 Papaver somniferum HOM05D005271 ORTHO05D006072 2.6e-26 122.1 108 63.0
ClCG01G025510 Citrullus lanatus HOM05D005271 ORTHO05D006072 3.4e-26 121.7 105 61.9
DCAR_002456 Daucus carota HOM05D005271 ORTHO05D006072 4.5e-26 121.3 105 61.9
DCAR_002458 Daucus carota HOM05D005271 ORTHO05D006072 4.5e-26 121.3 105 61.9
SGA_v2.0_scaffold118G32500 Striga asiatica HOM05D005271 ORTHO05D006072 4.5e-26 121.3 105 64.8
arahy.Tifrunner.gnm1.ann1.5IT82G Arachis hypogaea HOM05D005271 ORTHO05D006072 5.8e-26 120.9 106 62.3
PSO541G1812 Papaver somniferum HOM05D005271 ORTHO05D006072 5.8e-26 120.9 107 61.7
Lj2g0008924 Lotus japonicus HOM05D005271 ORTHO05D006072 7.6e-26 120.6 106 63.2
PSO675G0749 Papaver somniferum HOM05D005271 ORTHO05D006072 7.6e-26 120.6 107 60.7
Psat0s5346g0120 Pisum sativum HOM05D005271 ORTHO05D006072 7.6e-26 120.6 105 60.0
Nitab4.5_0002741g0010 Nicotiana tabacum HOM05D005271 ORTHO05D006072 9.9e-26 120.2 105 61.0
Oeu021212.1 Olea europaea HOM05D005271 ORTHO05D006072 1.3e-25 119.8 105 66.7
CAN.G350.33 Capsicum annuum HOM05D005271 ORTHO05D006072 1.7e-25 119.4 105 60.0
MELO3C007032.2 Cucumis melo HOM05D005271 ORTHO05D006072 1.7e-25 119.4 105 61.9
Glyma.13G170400 Glycine max HOM05D005271 ORTHO05D006072 2.2e-25 119.0 105 56.2
Phvul.004G017800 Phaseolus vulgaris HOM05D005271 ORTHO05D006072 2.9e-25 118.6 105 57.1
Cfa001130 Carpinus fangiana HOM05D005271 ORTHO05D006072 3.8e-25 118.2 105 61.9
Ca_28197_v3 Cicer arietinum L. HOM05D005271 ORTHO05D006072 3.8e-25 118.2 107 61.7
Ciclev10017270m.g Citrus clementina HOM05D005271 ORTHO05D006072 3.8e-25 118.2 103 60.2
Nn7g38328 Nelumbo nucifera HOM05D005271 ORTHO05D006072 3.8e-25 118.2 106 64.2
RcHm_v2.0_Chr5g0021041 Rosa chinensis HOM05D005271 ORTHO05D006072 3.8e-25 118.2 104 60.6
CiPaw.09G137400 Carya illinoinensis HOM05D005271 ORTHO05D006072 4.9e-25 117.9 104 60.6
CsaV3_6G052780 Cucumis sativus L. HOM05D005271 ORTHO05D006072 4.9e-25 117.9 105 61.0
Gohir.D09G227900 Gossypium hirsutum HOM05D005271 ORTHO05D006072 4.9e-25 117.9 103 58.3
Gorai.006G250600 Gossypium raimondii HOM05D005271 ORTHO05D006072 4.9e-25 117.9 103 58.3
Medtr6g017185 Medicago truncatula HOM05D005271 ORTHO05D006072 4.9e-25 117.9 105 59.0
arahy.Tifrunner.gnm1.ann1.0KQV7A Arachis hypogaea HOM05D005271 ORTHO05D006072 6.4e-25 117.5 106 60.4
arahy.Tifrunner.gnm1.ann1.31Z3CL Arachis hypogaea HOM05D005271 ORTHO05D006072 6.4e-25 117.5 106 60.4
VMungo0464G2009 Vigna mungo HOM05D005271 ORTHO05D006072 6.4e-25 117.5 105 57.1
arahy.Tifrunner.gnm1.ann1.VX2J7C Arachis hypogaea HOM05D005271 ORTHO05D006072 8.4e-25 117.1 106 60.4
Gohir.A09G226900 Gossypium hirsutum HOM05D005271 ORTHO05D006072 8.4e-25 117.1 103 57.3
Nitab4.5_0004741g0030 Nicotiana tabacum HOM05D005271 ORTHO05D006072 8.4e-25 117.1 105 59.0
Thecc.04G266100 Theobroma cacao HOM05D005271 ORTHO05D006072 8.4e-25 117.1 105 59.0
Cpa.g.sc51.137 Carica papaya HOM05D005271 ORTHO05D006072 1.4e-24 116.3 87 67.8
Duzib151G0973 Durio zibethinus HOM05D005271 ORTHO05D006072 1.4e-24 116.3 105 61.0
FAN21G0135 Fragaria x ananassa HOM05D005271 ORTHO05D006072 1.4e-24 116.3 104 60.6
PGR142G2670 Punica granatum HOM05D005271 ORTHO05D006072 2.4e-24 115.5 105 61.9
FvH4_3g12930 Fragaria vesca HOM05D005271 ORTHO05D006072 3.2e-24 115.2 104 60.6
FAN11G1405 Fragaria x ananassa HOM05D005271 ORTHO05D006072 3.2e-24 115.2 104 60.6
TAR629G0996 Trochodendron aralioides HOM05D005271 ORTHO05D006072 3.2e-24 115.2 106 62.3
HanXRQChr14g0428301 Helianthus annuus HOM05D005271 ORTHO05D006072 4.2e-24 114.8 106 57.5
QL11p012305 Quercus lobata HOM05D005271 ORTHO05D006072 4.2e-24 114.8 87 66.7
CANSAT25G1004 Cannabis sativa HOM05D005271 ORTHO05D006072 5.4e-24 114.4 102 59.8
FAN16G1303 Fragaria x ananassa HOM05D005271 ORTHO05D006072 5.4e-24 114.4 104 59.6
Duzib212G0597 Durio zibethinus HOM05D005271 ORTHO05D006072 7.1e-24 114.0 105 58.1
GSVIVG01012142001 Vitis vinifera HOM05D005271 ORTHO05D006072 7.1e-24 114.0 95 67.4
arahy.Tifrunner.gnm1.ann1.FU3306 Arachis hypogaea HOM05D005271 ORTHO05D006072 9.3e-24 113.6 106 60.4
TWI63G0865 Tripterygium wilfordii HOM05D005271 ORTHO05D006072 9.3e-24 113.6 105 58.1
TAR627G0156 Trochodendron aralioides HOM05D005271 ORTHO05D006072 9.3e-24 113.6 105 59.0
FvH4_4g01060 Fragaria vesca HOM05D005271 ORTHO05D006072 1.6e-23 112.8 103 59.2
FAN12G2425 Fragaria x ananassa HOM05D005271 ORTHO05D006072 1.6e-23 112.8 103 59.2
Hma1.2p1_0088F.1_g045170 Hydrangea macrophylla HOM05D005271 ORTHO05D006072 1.6e-23 112.8 106 58.5
Atru.chr1.851 Acer truncatum HOM05D005271 ORTHO05D006072 2.1e-23 112.5 105 61.9
Dinv31186 Davidia involucrata HOM05D005271 ORTHO05D006072 2.1e-23 112.5 105 60.0
Cc03_g07280 Coffea canephora HOM05D005271 ORTHO05D006072 2.7e-23 112.1 94 63.8
Lsat_1_v5_gn_2_4960 Lactuca sativa HOM05D005271 ORTHO05D006072 2.7e-23 112.1 98 57.1
HPP92_012976 Vanilla planifolia HOM05D005271 ORTHO05D006072 2.7e-23 112.1 105 53.3
Sopen11g025310 Solanum pennellii HOM05D005271 ORTHO05D006072 3.5e-23 111.7 94 62.8
Aa31LG5G5280 Aethionema arabicum HOM05D005271 ORTHO05D006072 4.6e-23 111.3 87 65.5
Sc10g0007720 Simmondsia chinensis HOM05D005271 ORTHO05D006072 6.0e-23 110.9 96 59.4
Carub.0004s1300 Capsella rubella HOM05D005271 ORTHO05D006072 7.9e-23 110.5 87 65.5
FAN22G0530 Fragaria x ananassa HOM05D005271 ORTHO05D006072 7.9e-23 110.5 92 62.0
Peaxi162Scf00004g02726 Petunia axillaris HOM05D005271 ORTHO05D006072 7.9e-23 110.5 123 52.8
SalBow7G2991 Salvia bowleyana HOM05D005271 ORTHO05D006072 1.0e-22 110.2 107 57.9
BraA04t17934Z Brassica rapa HOM05D005271 ORTHO05D006072 1.3e-22 109.8 87 64.4
CDE05G1696 Ceratophyllum demersum HOM05D005271 ORTHO05D006072 1.3e-22 109.8 87 62.1
Rhsim12G0144200 Rhododendron simsii HOM05D005271 ORTHO05D006072 1.3e-22 109.8 126 51.6
TWI15G1056 Tripterygium wilfordii HOM05D005271 ORTHO05D006072 1.3e-22 109.8 105 56.2
AT1G05780 Arabidopsis thaliana HOM05D005271 ORTHO05D006072 1.8e-22 109.4 108 63.0
BcaB06g28531 Brassica carinata HOM05D005271 ORTHO05D006072 1.8e-22 109.4 87 64.4
C04p60870 Brassica napus HOM05D005271 ORTHO05D006072 1.8e-22 109.4 87 64.4
BolC4t27578H Brassica oleracea HOM05D005271 ORTHO05D006072 1.8e-22 109.4 87 64.4
Potri.001G160500 Populus trichocarpa HOM05D005271 ORTHO05D006072 1.8e-22 109.4 104 55.8
Prupe.4G117300 Prunus persica HOM05D005271 ORTHO05D006072 1.8e-22 109.4 105 57.1
AL1G15680 Arabidopsis lyrata HOM05D005271 ORTHO05D006072 3.0e-22 108.6 106 60.4
AT2G31710 Arabidopsis thaliana HOM05D005271 ORTHO05D006072 3.0e-22 108.6 96 62.5
BraA03t11049Z Brassica rapa HOM05D000364 ORTHO05D006072 3.0e-22 108.6 87 64.4
HanXRQChr06g0184021 Helianthus annuus HOM05D005271 ORTHO05D006072 3.0e-22 108.6 106 56.6
AL4G26950 Arabidopsis lyrata HOM05D005271 ORTHO05D006072 6.7e-22 107.5 96 62.5
EL10Ac1g00803 Beta vulgaris HOM05D005271 ORTHO05D006072 6.7e-22 107.5 89 62.9
THA.LOC104800917 Tarenaya hassleriana HOM05D005271 ORTHO05D006072 6.7e-22 107.5 96 61.5
BcaB01g04025 Brassica carinata HOM05D005271 ORTHO05D006072 8.7e-22 107.1 84 65.5
A03p17850 Brassica napus HOM05D000364 ORTHO05D006072 8.7e-22 107.1 87 63.2
Thhalv10017819m.g Eutrema salsugineum HOM05D005271 ORTHO05D006072 8.7e-22 107.1 107 60.7
CDE05G0701 Ceratophyllum demersum HOM05D005271 ORTHO05D006072 1.1e-21 106.7 85 61.2
Gohir.A10G107101 Gossypium hirsutum HOM05D005271 ORTHO05D006072 1.1e-21 106.7 90 58.9
Manes.05G190800 Manihot esculenta HOM05D005271 ORTHO05D006072 1.1e-21 106.7 105 57.1
CARHR125350 Cardamine hirsuta HOM05D005271 ORTHO05D006072 1.5e-21 106.3 104 56.7
ECA238G4336 Erigeron canadensis HOM05D005271 ORTHO05D006072 1.5e-21 106.3 106 51.9
BcaC01g05934 Brassica carinata HOM05D000364 ORTHO05D006072 1.9e-21 105.9 107 59.8
C03p20920 Brassica napus HOM05D000364 ORTHO05D006072 1.9e-21 105.9 107 59.8
Lalb_Chr02g0160001 Lupinus albus HOM05D005271 ORTHO05D006072 1.9e-21 105.9 107 57.0
Lalb_Chr02g0160211 Lupinus albus HOM05D005271 ORTHO05D006072 1.9e-21 105.9 107 57.0
Manes.01G042100 Manihot esculenta HOM05D005271 ORTHO05D006072 2.5e-21 105.5 105 56.2
PSO170G3626 Papaver somniferum HOM05D005271 ORTHO05D006072 2.5e-21 105.5 108 55.6
THA.LOC104815870 Tarenaya hassleriana HOM05D005271 ORTHO05D006072 2.5e-21 105.5 98 60.2
A04p24140 Brassica napus HOM05D005271 ORTHO05D006072 3.3e-21 105.1 87 60.9
CARHR005290 Cardamine hirsuta HOM05D005271 ORTHO05D006072 3.3e-21 105.1 101 57.4
Ah.05g173390 Amaranthus hybridus HOM05D005271 ORTHO05D006072 1.3e-20 103.2 88 60.2
Sabra01G0131700 Salix brachista HOM05D005271 ORTHO05D006072 6.2e-20 100.9 118 50.8
C04p18180 Brassica napus HOM05D005271 ORTHO05D006072 1.1e-19 100.1 87 63.2
BolC4t23374H Brassica oleracea HOM05D005271 ORTHO05D006072 1.1e-19 100.1 87 63.2
A05p13810 Brassica napus HOM05D005271 ORTHO05D006072 1.4e-19 99.8 104 55.8
MD10G1227700 Malus domestica HOM05D005271 ORTHO05D006072 1.8e-19 99.4 95 55.8
MD05G1247100 Malus domestica HOM05D005271 ORTHO05D006072 3.1e-19 98.6 91 54.9
BcaC02g11279 Brassica carinata HOM05D005271 ORTHO05D006072 9.0e-19 97.1 86 61.6
Os04g0612900 Oryza sativa ssp. japonica HOM05D005271 ORTHO05D006072 1.5e-18 96.3 106 50.9
ATR1120G033 Amborella trichopoda HOM05D005271 ORTHO05D006072 2.0e-18 95.9 89 50.6
Pp3c12_11530 Physcomitrium patens HOM05D005271 ORTHO05D006072 2.0e-18 95.9 105 51.4
Ah.01g016950 Amaranthus hybridus HOM05D005271 ORTHO05D006072 1.7e-17 92.8 95 49.5
BcaB02g10411 Brassica carinata HOM05D000896 ORTHO05D006072 1.7e-17 92.8 105 54.3
Zm00001eb071020 Zea mays HOM05D005271 ORTHO05D006072 4.9e-17 91.3 105 45.7
AUR62023913 Chenopodium quinoa HOM05D005271 ORTHO05D006072 8.4e-17 90.5 87 52.9
AUR62038333 Chenopodium quinoa HOM05D005271 ORTHO05D006072 1.9e-16 89.4 94 51.1
SMO300G0007 Selaginella moellendorffii HOM05D005271 ORTHO05D006072 9.3e-16 87.0 84 53.6
Mapoly0098s0021 Marchantia polymorpha HOM05D005271 ORTHO05D006072 2.3e-14 82.4 86 52.3
CSS0024418 Camellia sinensis var. sinensis HOM05D005271 ORTHO05D006072 3.9e-14 81.6 76 61.8
MBI02_g01139_MAGBIO Magnolia biondii HOM05D005271 ORTHO05D006072 2.5e-13 79.0 76 56.6
Eucgr.H02355 Eucalyptus grandis HOM05D005271 ORTHO05D006072 4.3e-13 78.2 76 63.2
MBI14_g01725_MAGBIO Magnolia biondii HOM05D005271 ORTHO05D006072 4.8e-12 74.7 74 56.8
Haze_05264 Corylus avellana HOM05D005271 ORTHO05D006072 1.1e-11 73.6 76 60.5
PGSC0003DMG400010917 Solanum tuberosum HOM05D005271 ORTHO05D006072 1.8e-11 72.8 72 58.3
COL.COLO4_15978 Corchorus olitorius HOM05D005271 ORTHO05D006072 2.4e-11 72.4 69 56.5
Hund17073 Selenicereus undatus HOM05D005271 ORTHO05D006072 1.0e-09 67.0 59 62.7
Hund00748 Selenicereus undatus HOM05D005271 ORTHO05D006072 1.3e-09 66.6 58 63.8
AUR62004132 Chenopodium quinoa HOM05D005271 ORTHO05D006072 1.7e-09 66.2 48 75.0
Zm00001eb430740 Zea mays HOM05D005271 ORTHO05D006072 8.4e-09 63.9 83 47.0
Aqoxy3G03156 Aquilegia oxysepala HOM05D005271 ORTHO05D006072 1.9e-08 62.8 66 53.0
EL10Ac9g21107 Beta vulgaris HOM05D005271 ORTHO05D006072 1.2e-07 60.1 57 57.9
CBR_g30301 Chara braunii HOM05D005271 ORTHO05D006072 3.9e-06 55.1 68 44.1


User provided reference genes

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