Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G1126 Salvia bowleyana HOM05D001756 ORTHO05D001581 1.1e-36 156.0 75 100.0
Oeu028918.1 Olea europaea HOM05D001756 ORTHO05D001581 9.1e-18 93.2 85 56.5
Oeu025312.1 Olea europaea HOM05D001756 ORTHO05D001581 5.0e-16 87.4 85 56.5
Cc02_g20030 Coffea canephora HOM05D001756 ORTHO05D001581 3.2e-15 84.7 87 56.3
Dinv09540 Davidia involucrata HOM05D001756 ORTHO05D001581 4.2e-15 84.3 81 58.0
Dinv16070 Davidia involucrata HOM05D001756 ORTHO05D001581 6.1e-14 80.5 82 54.9
GSVIVG01037055001 Vitis vinifera HOM05D001756 ORTHO05D001581 5.7e-12 73.9 80 56.2
TWI59G0044 Tripterygium wilfordii HOM05D001756 ORTHO05D001581 7.5e-12 73.6 80 47.5
Nitab4.5_0001099g0060 Nicotiana tabacum HOM05D001756 ORTHO05D001581 9.7e-12 73.2 84 51.2
Cfa004702 Carpinus fangiana HOM05D001756 ORTHO05D001581 1.3e-11 72.8 80 50.0
Haze_10304 Corylus avellana HOM05D001756 ORTHO05D001581 2.2e-11 72.0 80 48.8
QL11p029356 Quercus lobata HOM05D001756 ORTHO05D001581 2.2e-11 72.0 82 51.2
PGSC0003DMG400025738 Solanum tuberosum HOM05D001756 ORTHO05D001581 2.8e-11 71.6 85 50.6
CSS0039448 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 4.8e-11 70.9 78 51.3
CSS0040959 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 4.8e-11 70.9 82 48.8
Gohir.A11G212500 Gossypium hirsutum HOM05D001756 ORTHO05D001581 1.1e-10 69.7 83 49.4
vmacro01947 Vaccinium macrocarpon HOM05D001756 ORTHO05D001581 1.1e-10 69.7 78 52.6
Migut.B00462 Erythranthe guttata HOM05D001756 ORTHO05D001581 1.8e-10 68.9 75 50.7
HanXRQChr03g0074741 Helianthus annuus HOM05D001756 ORTHO05D001581 1.8e-10 68.9 79 48.1
PGR142G2395 Punica granatum HOM05D001756 ORTHO05D001581 1.8e-10 68.9 78 46.2
Solyc01g106830.4 Solanum lycopersicum HOM05D001756 ORTHO05D001581 1.8e-10 68.9 85 49.4
TWI23G1082 Tripterygium wilfordii HOM05D001756 ORTHO05D001581 1.8e-10 68.9 81 40.7
Peaxi162Scf00016g03021 Petunia axillaris HOM05D001756 ORTHO05D001581 2.4e-10 68.6 84 50.0
Lsat_1_v5_gn_5_117161 Lactuca sativa HOM05D001756 ORTHO05D001581 3.1e-10 68.2 78 46.2
CSS0000381 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 5.3e-10 67.4 82 47.6
Cpa.g.c33491 Carica papaya HOM05D001756 ORTHO05D001581 7.0e-10 67.0 80 52.5
Eucgr.H02325 Eucalyptus grandis HOM05D001756 ORTHO05D001581 7.0e-10 67.0 81 48.1
Lj4A164T42 Lonicera japonica HOM05D001756 ORTHO05D001581 7.0e-10 67.0 82 46.3
Gohir.D11G210700 Gossypium hirsutum HOM05D001756 ORTHO05D001581 9.1e-10 66.6 86 46.5
Gorai.007G226000 Gossypium raimondii HOM05D001756 ORTHO05D001581 9.1e-10 66.6 86 46.5
Hma1.2p1_1051F.1_g252120 Hydrangea macrophylla HOM05D001756 ORTHO05D001581 9.1e-10 66.6 81 48.1
HanXRQChr10g0305161 Helianthus annuus HOM05D001756 ORTHO05D001581 1.2e-09 66.2 76 47.4
Prupe.8G150200 Prunus persica HOM05D001756 ORTHO05D001581 1.2e-09 66.2 80 48.8
RhsimUnG0041200 Rhododendron simsii HOM05D001756 ORTHO05D001581 1.6e-09 65.9 79 48.1
RhsimUnG0123200 Rhododendron simsii HOM05D001756 ORTHO05D001581 1.6e-09 65.9 79 48.1
Atru.chr5.2299 Acer truncatum HOM05D001756 ORTHO05D001581 2.0e-09 65.5 79 48.1
CAN.G606.70 Capsicum annuum HOM05D001756 ORTHO05D001581 2.0e-09 65.5 85 50.6
Eucgr.I00676 Eucalyptus grandis HOM05D001756 ORTHO05D001581 2.0e-09 65.5 82 47.6
Duzib264G0169 Durio zibethinus HOM05D001756 ORTHO05D001581 2.7e-09 65.1 84 46.4
Eucgr.H02324 Eucalyptus grandis HOM05D001756 ORTHO05D001581 2.7e-09 65.1 81 49.4
Potri.009G085600 Populus trichocarpa HOM05D001756 ORTHO05D001581 2.7e-09 65.1 77 48.1
TAR628G0014 Trochodendron aralioides HOM05D001756 ORTHO05D001581 2.7e-09 65.1 79 49.4
Duzib248G0626 Durio zibethinus HOM05D001756 ORTHO05D001581 3.5e-09 64.7 92 42.4
Migut.N01127 Erythranthe guttata HOM05D001756 ORTHO05D001581 3.5e-09 64.7 79 53.2
Thecc.01G075600 Theobroma cacao HOM05D001756 ORTHO05D001581 3.5e-09 64.7 82 48.8
Dinv23040 Davidia involucrata HOM05D001756 ORTHO05D001581 4.5e-09 64.3 83 50.6
Duzib147G1196 Durio zibethinus HOM05D001756 ORTHO05D001581 4.5e-09 64.3 85 47.1
THA.LOC104825794 Tarenaya hassleriana HOM05D001756 ORTHO05D015390 4.5e-09 64.3 74 48.6
Gohir.A03G181100 Gossypium hirsutum HOM05D001756 ORTHO05D001581 5.9e-09 63.9 78 51.3
Sabra09G0065700 Salix brachista HOM05D001756 ORTHO05D001581 5.9e-09 63.9 82 47.6
Thecc.02G119700 Theobroma cacao HOM05D001756 ORTHO05D001581 5.9e-09 63.9 83 47.0
Actinidia16413 Actinidia chinensis HOM05D001756 ORTHO05D001581 7.7e-09 63.5 79 46.8
Hma1.2p1_0424F.1_g150520 Hydrangea macrophylla HOM05D001756 ORTHO05D001581 7.7e-09 63.5 82 47.6
Lj7A111T6 Lonicera japonica HOM05D001756 ORTHO05D001581 7.7e-09 63.5 77 51.9
Manes.07G057300 Manihot esculenta HOM05D001756 ORTHO05D001581 7.7e-09 63.5 79 48.1
PGR004G0933 Punica granatum HOM05D001756 ORTHO05D001581 7.7e-09 63.5 81 46.9
CiPaw.01G002400 Carya illinoinensis HOM05D001756 ORTHO05D001581 1.0e-08 63.2 84 42.9
Eucgr.I02494 Eucalyptus grandis HOM05D001756 ORTHO05D001581 1.0e-08 63.2 81 49.4
MD05G1105500 Malus domestica HOM05D001756 ORTHO05D001581 1.0e-08 63.2 82 47.6
Actinidia11965 Actinidia chinensis HOM05D001756 ORTHO05D001581 1.3e-08 62.8 83 48.2
Actinidia34539 Actinidia chinensis HOM05D001756 ORTHO05D001581 1.3e-08 62.8 83 45.8
A04p17430 Brassica napus HOM05D001756 ORTHO05D001581 1.3e-08 62.8 85 51.8
BraA04t17366Z Brassica rapa HOM05D001756 ORTHO05D001581 1.3e-08 62.8 85 51.8
CiPaw.05G020600 Carya illinoinensis HOM05D001756 ORTHO05D001581 1.3e-08 62.8 80 41.2
Duzib132G0635 Durio zibethinus HOM05D001756 ORTHO05D001581 1.3e-08 62.8 83 44.6
HanXRQChr03g0072941 Helianthus annuus HOM05D001756 ORTHO05D001581 1.3e-08 62.8 82 50.0
SalBow6G2956 Salvia bowleyana HOM05D001756 ORTHO05D001581 1.3e-08 62.8 62 51.6
CiPaw.06G164100 Carya illinoinensis HOM05D001756 ORTHO05D001581 1.7e-08 62.4 80 42.5
MD10G1110000 Malus domestica HOM05D001756 ORTHO05D001581 1.7e-08 62.4 79 45.6
BcaC02g08589 Brassica carinata HOM05D001756 ORTHO05D001581 2.2e-08 62.0 85 48.2
C04p52190 Brassica napus HOM05D001756 ORTHO05D001581 2.2e-08 62.0 85 48.2
BolC4t26796H Brassica oleracea HOM05D001756 ORTHO05D001581 2.2e-08 62.0 85 48.2
Hma1.2p1_1760F.1_g301210 Hydrangea macrophylla HOM05D001756 ORTHO05D001581 2.2e-08 62.0 82 46.3
Hma1.2p1_2434F.1_g322120 Hydrangea macrophylla HOM05D001756 ORTHO05D001581 2.2e-08 62.0 82 46.3
Rhsim10G0094800 Rhododendron simsii HOM05D001756 ORTHO05D001581 2.9e-08 61.6 82 47.6
Actinidia04395 Actinidia chinensis HOM05D001756 ORTHO05D001581 3.8e-08 61.2 74 47.3
Sabra16G0181600 Salix brachista HOM05D001756 ORTHO05D001581 3.8e-08 61.2 80 45.0
vmacro01948 Vaccinium macrocarpon HOM05D001756 ORTHO05D001581 3.8e-08 61.2 76 47.4
Actinidia00357 Actinidia chinensis HOM05D001756 ORTHO05D001581 5.0e-08 60.8 80 43.8
ECA234G1996 Erigeron canadensis HOM05D001756 ORTHO05D001581 5.0e-08 60.8 61 54.1
Sopen01g049140 Solanum pennellii HOM05D001756 ORTHO05D001581 5.0e-08 60.8 76 47.4
Atru.chr13.861 Acer truncatum HOM05D001756 ORTHO05D001581 6.5e-08 60.5 72 45.8
BcaB06g27846 Brassica carinata HOM05D001756 ORTHO05D001581 8.5e-08 60.1 85 47.1
Duzib187G0009 Durio zibethinus HOM05D001756 ORTHO05D001581 8.5e-08 60.1 82 46.3
Gohir.A12G078300 Gossypium hirsutum HOM05D001756 ORTHO05D001581 8.5e-08 60.1 88 42.0
Gorai.005G229900 Gossypium raimondii HOM05D001756 ORTHO05D001581 8.5e-08 60.1 78 50.0
Actinidia28000 Actinidia chinensis HOM05D001756 ORTHO05D001581 1.1e-07 59.7 77 46.8
FvH4_2g03340 Fragaria vesca HOM05D001756 ORTHO05D001581 1.1e-07 59.7 81 45.7
TAR376G0419 Trochodendron aralioides HOM05D001756 ORTHO05D001581 1.1e-07 59.7 81 45.7
vmacro18016 Vaccinium macrocarpon HOM05D001756 ORTHO05D001581 1.1e-07 59.7 81 48.1
Cc07_g07320 Coffea canephora HOM05D001756 ORTHO05D001581 1.5e-07 59.3 84 47.6
COL.COLO4_28472 Corchorus olitorius HOM05D001756 ORTHO05D001581 1.5e-07 59.3 76 48.7
Dinv44936 Davidia involucrata HOM05D001756 ORTHO05D001581 1.5e-07 59.3 77 46.8
Gorai.008G019400 Gossypium raimondii HOM05D001756 ORTHO05D001581 1.5e-07 59.3 82 43.9
RcHm_v2.0_Chr6g0248481 Rosa chinensis HOM05D001756 ORTHO05D001581 1.5e-07 59.3 81 44.4
Atru.chr3.1054 Acer truncatum HOM05D001756 ORTHO05D001581 1.9e-07 58.9 80 43.8
Gorai.013G051800 Gossypium raimondii HOM05D001756 ORTHO05D001581 2.5e-07 58.5 89 46.1
Dinv26955 Davidia involucrata HOM05D001756 ORTHO05D001581 3.2e-07 58.2 86 46.5
FvH4_2g32750 Fragaria vesca HOM05D001756 ORTHO05D001581 3.2e-07 58.2 87 47.1
FAN24G1728 Fragaria x ananassa HOM05D001756 ORTHO05D001581 3.2e-07 58.2 87 47.1
Prupe.1G420000 Prunus persica HOM05D001756 ORTHO05D001581 3.2e-07 58.2 85 42.4
PGR042G3192 Punica granatum HOM05D001756 ORTHO05D001581 3.2e-07 58.2 71 45.1
RcHm_v2.0_Chr2g0108571 Rosa chinensis HOM05D001756 ORTHO05D001581 3.2e-07 58.2 84 46.4
FAN20G1648 Fragaria x ananassa HOM05D001756 ORTHO05D001581 4.2e-07 57.8 81 44.4
Sabra07G0005100 Salix brachista HOM05D001756 ORTHO05D001581 4.2e-07 57.8 80 46.2
Gohir.D12G076500 Gossypium hirsutum HOM05D001756 ORTHO05D001581 5.5e-07 57.4 88 42.0
Gorai.008G085100 Gossypium raimondii HOM05D001756 ORTHO05D001581 5.5e-07 57.4 88 42.0
Sp5g12310 Schrenkiella parvula HOM05D001756 ORTHO05D001581 5.5e-07 57.4 78 44.9
ECA240G4721 Erigeron canadensis HOM05D006380 ORTHO05D008400 7.2e-07 57.0 76 51.3
Gohir.A13G047800 Gossypium hirsutum HOM05D001756 ORTHO05D001581 7.2e-07 57.0 89 43.8
HanXRQChr12g0376281 Helianthus annuus HOM05D001756 ORTHO05D001581 7.2e-07 57.0 73 45.2
Lsat_1_v5_gn_9_113360 Lactuca sativa HOM05D001756 ORTHO05D001581 7.2e-07 57.0 86 46.5
RcHm_v2.0_Chr6g0309921 Rosa chinensis HOM05D001756 ORTHO05D001581 7.2e-07 57.0 89 44.9
arahy.Tifrunner.gnm1.ann1.F1MTJK Arachis hypogaea HOM05D001756 ORTHO05D001581 9.4e-07 56.6 79 49.4
CiPaw.02G001200 Carya illinoinensis HOM05D001756 ORTHO05D001581 9.4e-07 56.6 83 43.4
Thhalv10000381m.g Eutrema salsugineum HOM05D001756 ORTHO05D001581 9.4e-07 56.6 86 45.3
Glyma.14G089063 Glycine max HOM05D001756 ORTHO05D001581 9.4e-07 56.6 78 44.9
Gohir.D12G019100 Gossypium hirsutum HOM05D001756 ORTHO05D001581 9.4e-07 56.6 82 42.7
CiPaw.08G051600 Carya illinoinensis HOM05D001756 ORTHO05D001581 1.2e-06 56.2 83 39.8
ClCG01G017770 Citrullus lanatus HOM05D001756 ORTHO05D001581 1.2e-06 56.2 86 45.3
Ciclev10029689m.g Citrus clementina HOM05D001756 ORTHO05D001581 1.2e-06 56.2 85 42.4
FAN26G2568 Fragaria x ananassa HOM05D001756 ORTHO05D001581 1.2e-06 56.2 84 45.2
Lsat_1_v5_gn_3_86460 Lactuca sativa HOM05D001756 ORTHO05D001581 1.2e-06 56.2 72 43.1
Manes.12G117100 Manihot esculenta HOM05D001756 ORTHO05D001581 1.2e-06 56.2 74 48.6
Nitab4.5_0000142g0340 Nicotiana tabacum HOM05D001756 ORTHO05D001581 1.2e-06 56.2 70 47.1
Solyc02g092110.3 Solanum lycopersicum HOM05D001756 ORTHO05D001581 1.2e-06 56.2 69 47.8
CDE04G0180 Ceratophyllum demersum HOM05D001756 ORTHO05D001581 1.6e-06 55.8 77 41.6
COL.COLO4_11608 Corchorus olitorius HOM05D001756 ORTHO05D001581 1.6e-06 55.8 80 46.2
Gohir.D02G203180 Gossypium hirsutum HOM05D001756 ORTHO05D001581 1.6e-06 55.8 78 48.7
Hma1.2p1_0210F.1_g089330 Hydrangea macrophylla HOM05D001756 ORTHO05D001581 1.6e-06 55.8 73 46.6
MBI16_g27034_MAGBIO Magnolia biondii HOM05D001756 ORTHO05D001581 1.6e-06 55.8 74 44.6
Sp4g01910 Schrenkiella parvula HOM05D001756 ORTHO05D001581 1.6e-06 55.8 79 45.6
PGSC0003DMG400021406 Solanum tuberosum HOM05D001756 ORTHO05D001581 1.6e-06 55.8 69 47.8
TWI77G0501 Tripterygium wilfordii HOM05D001756 ORTHO05D001581 1.6e-06 55.8 76 42.1
AT2G22860 Arabidopsis thaliana HOM05D001756 ORTHO05D001581 2.1e-06 55.5 90 44.4
FAN27G0458 Fragaria x ananassa HOM05D001756 ORTHO05D001581 2.1e-06 55.5 81 43.2
Glyma.10G255800 Glycine max HOM05D001756 ORTHO05D001581 2.1e-06 55.5 76 47.4
Glyma.20G135700 Glycine max HOM05D001756 ORTHO05D001581 2.1e-06 55.5 76 47.4
Gohir.A12G018600 Gossypium hirsutum HOM05D001756 ORTHO05D001581 2.1e-06 55.5 81 44.4
Gohir.D13G046100 Gossypium hirsutum HOM05D001756 ORTHO05D001581 2.1e-06 55.5 89 43.8
MD15G1300000 Malus domestica HOM05D001756 ORTHO05D001581 2.1e-06 55.5 56 51.8
Potri.007G006800 Populus trichocarpa HOM05D001756 ORTHO05D001581 2.1e-06 55.5 80 43.8
Rhsim08G0091500 Rhododendron simsii HOM05D001756 ORTHO05D001581 2.1e-06 55.5 81 45.7
Sopen02g036700 Solanum pennellii HOM05D001756 ORTHO05D001581 2.1e-06 55.5 69 47.8
ATR0739G092 Amborella trichopoda HOM05D001756 ORTHO05D001581 2.7e-06 55.1 78 43.6
arahy.Tifrunner.gnm1.ann1.KSYJ7I Arachis hypogaea HOM05D001756 ORTHO05D001581 2.7e-06 55.1 67 46.3
arahy.Tifrunner.gnm1.ann1.WWP4H1 Arachis hypogaea HOM05D001756 ORTHO05D001581 2.7e-06 55.1 73 49.3
FAN27G1437 Fragaria x ananassa HOM05D001756 ORTHO05D001581 2.7e-06 55.1 86 44.2
Nitab4.5_0009491g0010 Nicotiana tabacum HOM05D001756 ORTHO05D001581 2.7e-06 55.1 75 44.0
Potri.002G116300 Populus trichocarpa HOM05D001756 ORTHO05D001581 2.7e-06 55.1 75 45.3
Prupe.6G217500 Prunus persica HOM05D001756 ORTHO05D001581 2.7e-06 55.1 80 42.5
RhsimUnG0122800 Rhododendron simsii HOM05D001756 ORTHO05D001581 2.7e-06 55.1 80 43.8
arahy.Tifrunner.gnm1.ann1.22FXNP Arachis hypogaea HOM05D001756 ORTHO05D001581 3.6e-06 54.7 79 48.1
arahy.Tifrunner.gnm1.ann1.LVLW1Z Arachis hypogaea HOM05D001756 ORTHO05D001581 3.6e-06 54.7 72 50.0
CAN.G1343.3 Capsicum annuum HOM05D001756 ORTHO05D001581 3.6e-06 54.7 77 44.2
Cfa004383 Carpinus fangiana HOM05D001756 ORTHO05D001581 3.6e-06 54.7 78 44.9
CiPaw.07G172800 Carya illinoinensis HOM05D001756 ORTHO05D001581 3.6e-06 54.7 77 41.6
Phvul.003G233400 Phaseolus vulgaris HOM05D001756 ORTHO05D001581 3.6e-06 54.7 77 44.2
Phvul.007G047000 Phaseolus vulgaris HOM05D001756 ORTHO05D001581 3.6e-06 54.7 76 43.4
Rhsim08G0091400 Rhododendron simsii HOM05D001756 ORTHO05D001581 3.6e-06 54.7 81 44.4
Sabra02G0091600 Salix brachista HOM05D001756 ORTHO05D001581 3.6e-06 54.7 72 45.8
THA.LOC104827714 Tarenaya hassleriana HOM05D001756 ORTHO05D001581 3.6e-06 54.7 78 43.6
EL10Ac6g15597 Beta vulgaris HOM05D001756 ORTHO05D001581 4.7e-06 54.3 75 46.7
CSS0048145 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 4.7e-06 54.3 82 43.9
Glyma.05G107800 Glycine max HOM05D001756 ORTHO05D001581 4.7e-06 54.3 61 47.5
Gohir.A06G025000 Gossypium hirsutum HOM05D001756 ORTHO05D001581 4.7e-06 54.3 76 47.4
PSO017G5266 Papaver somniferum HOM05D001756 ORTHO05D001581 4.7e-06 54.3 78 44.9
Rhsim06G0064100 Rhododendron simsii HOM05D001756 ORTHO05D001581 4.7e-06 54.3 79 45.6
THA.LOC104819883 Tarenaya hassleriana HOM05D001756 ORTHO05D001581 4.7e-06 54.3 79 45.6
ECA246G3808 Erigeron canadensis HOM05D001756 ORTHO05D001581 6.1e-06 53.9 74 44.6
FAN15G0430 Fragaria x ananassa HOM05D001756 ORTHO05D001581 6.1e-06 53.9 86 43.0
Glyma.17G233400 Glycine max HOM05D001756 ORTHO05D001581 6.1e-06 53.9 82 42.7
Lj2g0014409 Lotus japonicus HOM05D001756 ORTHO05D001581 6.1e-06 53.9 68 47.1
Nn5g30652 Nelumbo nucifera HOM05D001756 ORTHO05D001581 6.1e-06 53.9 82 39.0
CSS0014839 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 8.0e-06 53.5 80 43.8
CSS0047712 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 8.0e-06 53.5 80 43.8
Gohir.D06G022100 Gossypium hirsutum HOM05D001756 ORTHO05D001581 8.0e-06 53.5 76 47.4
Gorai.010G026700 Gossypium raimondii HOM05D001756 ORTHO05D001581 8.0e-06 53.5 76 47.4
Lj2g0023173 Lotus japonicus HOM05D001756 ORTHO05D001581 8.0e-06 53.5 81 38.3
Lj5g0025862 Lotus japonicus HOM05D001756 ORTHO05D001581 8.0e-06 53.5 81 46.9
Sc15g0005410 Simmondsia chinensis HOM05D001756 ORTHO05D001581 8.0e-06 53.5 76 44.7


User provided reference genes

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