Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G0599 Salvia bowleyana HOM05D006056 ORTHO05D007136 2.5e-74 282.0 134 100.0
Migut.B01239 Erythranthe guttata HOM05D006056 ORTHO05D007136 9.5e-34 147.1 101 73.3
MSTRG.16982 Avicennia marina HOM05D006056 ORTHO05D007136 3.5e-28 128.6 100 68.0
Dinv44692 Davidia involucrata HOM05D006056 ORTHO05D007136 1.9e-26 122.9 105 62.9
SGA_v2.0_scaffold124G33607 Striga asiatica HOM05D006056 ORTHO05D007136 6.2e-25 117.9 102 59.8
Cc00_g27250 Coffea canephora HOM05D006056 ORTHO05D007136 8.1e-25 117.5 104 58.7
Nitab4.5_0005808g0070 Nicotiana tabacum HOM05D006056 ORTHO05D007136 8.1e-25 117.5 105 60.0
Cc08_g11260 Coffea canephora HOM05D006056 ORTHO05D007136 4.0e-24 115.2 104 57.7
unitig_736.g22224 Utricularia gibba HOM05D006056 ORTHO05D007136 2.0e-23 112.8 100 60.0
Actinidia10152 Actinidia chinensis HOM05D006056 ORTHO05D007136 2.6e-23 112.5 100 62.0
Actinidia06230 Actinidia chinensis HOM05D006056 ORTHO05D007136 3.4e-23 112.1 100 64.0
Nitab4.5_0003481g0070 Nicotiana tabacum HOM05D006056 ORTHO05D007136 3.4e-23 112.1 105 59.0
Haze_03023 Corylus avellana HOM05D006056 ORTHO05D007136 7.5e-23 110.9 97 59.8
Peaxi162Scf00082g00120 Petunia axillaris HOM05D006056 ORTHO05D007136 7.5e-23 110.9 105 61.9
CiPaw.13G014800 Carya illinoinensis HOM05D006056 ORTHO05D007136 2.2e-22 109.4 97 60.8
Haze_03016 Corylus avellana HOM05D006056 ORTHO05D007136 2.2e-22 109.4 97 59.8
DCAR_031839 Daucus carota HOM05D006056 ORTHO05D007136 2.2e-22 109.4 91 61.5
Solyc01g096480.2 Solanum lycopersicum HOM05D006056 ORTHO05D007136 2.2e-22 109.4 102 60.8
Duzib114G0422 Durio zibethinus HOM05D006056 ORTHO05D007136 2.9e-22 109.0 98 58.2
Potri.001G028500 Populus trichocarpa HOM05D006056 ORTHO05D007136 3.7e-22 108.6 88 62.5
Sopen01g040210 Solanum pennellii HOM05D006056 ORTHO05D007136 3.7e-22 108.6 102 60.8
Lsat_1_v5_gn_9_40260 Lactuca sativa HOM05D006056 ORTHO05D007136 4.9e-22 108.2 95 62.1
Lj3g0018945 Lotus japonicus HOM05D006056 ORTHO05D007136 6.4e-22 107.8 92 58.7
Psat5g221760 Pisum sativum HOM05D006056 ORTHO05D007136 6.4e-22 107.8 79 64.6
Rhsim07G0067800 Rhododendron simsii HOM05D006056 ORTHO05D007136 6.4e-22 107.8 100 58.0
Duzib106G1426 Durio zibethinus HOM05D006056 ORTHO05D007136 1.4e-21 106.7 98 59.2
Medtr3g014240 Medicago truncatula HOM05D006056 ORTHO05D007136 1.4e-21 106.7 88 59.1
Sabra01G0020900 Salix brachista HOM05D006056 ORTHO05D007136 1.4e-21 106.7 90 57.8
Gohir.D10G193500 Gossypium hirsutum HOM05D006056 ORTHO05D007136 1.9e-21 106.3 87 62.1
Gorai.011G216600 Gossypium raimondii HOM05D006056 ORTHO05D007136 1.9e-21 106.3 87 62.1
Phvul.005G025600 Phaseolus vulgaris HOM05D006056 ORTHO05D007136 1.9e-21 106.3 97 58.8
Duzib106G0937 Durio zibethinus HOM05D006056 ORTHO05D007136 2.4e-21 105.9 98 58.2
PGSC0003DMG400005407 Solanum tuberosum HOM05D006056 ORTHO05D007136 2.4e-21 105.9 101 61.4
CiPaw.14G008500 Carya illinoinensis HOM05D006056 ORTHO05D007136 3.2e-21 105.5 97 58.8
Lalb_Chr04g0264131 Lupinus albus HOM05D006056 ORTHO05D007136 9.2e-21 104.0 81 63.0
Duzib106G1601 Durio zibethinus HOM05D006056 ORTHO05D007136 1.2e-20 103.6 88 58.0
Glyma.04G135300 Glycine max HOM05D006056 ORTHO05D007136 1.2e-20 103.6 101 56.4
Hund13373 Selenicereus undatus HOM05D006056 ORTHO05D007136 1.2e-20 103.6 97 55.7
vmacro13759 Vaccinium macrocarpon HOM05D006056 ORTHO05D007136 1.2e-20 103.6 99 58.6
GSVIVG01036664001 Vitis vinifera HOM05D006056 ORTHO05D007136 1.6e-20 103.2 92 59.8
Prupe.2G039200 Prunus persica HOM05D006056 ORTHO05D007136 2.1e-20 102.8 95 52.6
VMungo1080G1125 Vigna mungo HOM05D006056 ORTHO05D007136 2.1e-20 102.8 110 53.6
arahy.Tifrunner.gnm1.ann1.X1BBAM Arachis hypogaea HOM05D006056 ORTHO05D007136 2.7e-20 102.4 84 64.3
Glyma.11G156500 Glycine max HOM05D006056 ORTHO05D007136 2.7e-20 102.4 76 69.7
Thecc.10G150600 Theobroma cacao HOM05D006056 ORTHO05D007136 2.7e-20 102.4 88 60.2
Lalb_Chr01g0014891 Lupinus albus HOM05D006056 ORTHO05D007136 4.6e-20 101.7 71 69.0
Nn7g36738 Nelumbo nucifera HOM05D006056 ORTHO05D007136 4.6e-20 101.7 98 56.1
TWI38G2317 Tripterygium wilfordii HOM05D006056 ORTHO05D007136 4.6e-20 101.7 95 54.7
HanXRQChr11g0341201 Helianthus annuus HOM05D006056 ORTHO05D007136 6.0e-20 101.3 95 57.9
CANSAT56G1604 Cannabis sativa HOM05D006056 ORTHO05D007136 7.8e-20 100.9 93 59.1
CAN.G1045.19 Capsicum annuum HOM05D006056 ORTHO05D007136 7.8e-20 100.9 99 55.6
Cpa.g.sc2293.2 Carica papaya HOM05D006056 ORTHO05D007136 7.8e-20 100.9 80 63.8
ClCG08G010680 Citrullus lanatus HOM05D006056 ORTHO05D007136 7.8e-20 100.9 87 58.6
arahy.Tifrunner.gnm1.ann1.6DS776 Arachis hypogaea HOM05D006056 ORTHO05D007136 1.0e-19 100.5 85 63.5
PGR044G1154 Punica granatum HOM05D006056 ORTHO05D007136 1.3e-19 100.1 62 72.6
Ciclev10002629m.g Citrus clementina HOM05D006056 ORTHO05D007136 2.3e-19 99.4 82 54.9
Eucgr.G03224 Eucalyptus grandis HOM05D006056 ORTHO05D007136 3.0e-19 99.0 94 48.9
Manes.04G158100 Manihot esculenta HOM05D006056 ORTHO05D007136 3.0e-19 99.0 99 54.5
Sc10g0004470 Simmondsia chinensis HOM05D006056 ORTHO05D007136 3.0e-19 99.0 67 67.2
EL10Ac2g02787 Beta vulgaris HOM05D006056 ORTHO05D007136 6.6e-19 97.8 91 57.1
Nn2g14790 Nelumbo nucifera HOM05D006056 ORTHO05D007136 6.6e-19 97.8 99 55.6
PSO339G3509 Papaver somniferum HOM05D006056 ORTHO05D007136 6.6e-19 97.8 89 55.1
PSO384G1577 Papaver somniferum HOM05D006056 ORTHO05D007136 6.6e-19 97.8 100 52.0
THA.LOC104826732 Tarenaya hassleriana HOM05D006056 ORTHO05D007136 6.6e-19 97.8 59 76.3
Sed0016890 Sechium edule HOM05D006056 ORTHO05D007136 8.6e-19 97.4 65 64.6
Atru.chr12.1257 Acer truncatum HOM05D006056 ORTHO05D007136 1.1e-18 97.1 104 52.9
CsaV3_6G035850 Cucumis sativus L. HOM05D006056 ORTHO05D007136 1.5e-18 96.7 87 56.3
RcHm_v2.0_Chr1g0325731 Rosa chinensis HOM05D006056 ORTHO05D007136 1.9e-18 96.3 94 51.1
TPR.G1448 Trifolium pratense HOM05D006056 ORTHO05D007136 1.9e-18 96.3 89 57.3
MELO3C011393.2 Cucumis melo HOM05D006056 ORTHO05D007136 2.5e-18 95.9 87 56.3
FAN03G2563 Fragaria x ananassa HOM05D006056 ORTHO05D007136 3.3e-18 95.5 94 50.0
CSS0027846 Camellia sinensis var. sinensis HOM05D006056 ORTHO05D007136 4.3e-18 95.1 101 55.4
AUR62026890 Chenopodium quinoa HOM05D006056 ORTHO05D007136 4.3e-18 95.1 50 82.0
FAN01G1581 Fragaria x ananassa HOM05D006056 ORTHO05D007136 4.3e-18 95.1 94 52.1
MD02G1283300 Malus domestica HOM05D006056 ORTHO05D007136 4.3e-18 95.1 93 48.4
Aa31LG5G17320 Aethionema arabicum HOM05D006056 ORTHO05D007136 7.3e-18 94.4 59 69.5
FvH4_7g03410 Fragaria vesca HOM05D006056 ORTHO05D007136 9.5e-18 94.0 94 50.0
MD07G1048800 Malus domestica HOM05D006056 ORTHO05D007136 9.5e-18 94.0 91 50.5
QL04p017566 Quercus lobata HOM05D006056 ORTHO05D007136 1.2e-17 93.6 101 52.5
Thhalv10021607m.g Eutrema salsugineum HOM05D006056 ORTHO05D007136 1.6e-17 93.2 100 53.0
A05p41340 Brassica napus HOM05D006056 ORTHO05D007136 2.1e-17 92.8 69 63.8
Carub.0003s0627 Capsella rubella HOM05D006056 ORTHO05D007136 2.1e-17 92.8 51 74.5
FAN10G2490 Fragaria x ananassa HOM05D006056 ORTHO05D007136 2.1e-17 92.8 94 50.0
FAN06G0497 Fragaria x ananassa HOM05D006056 ORTHO05D007136 2.8e-17 92.4 94 48.9
AL3G17840 Arabidopsis lyrata HOM05D006056 ORTHO05D007136 3.6e-17 92.0 50 76.0
AT3G06730 Arabidopsis thaliana HOM05D006056 ORTHO05D007136 3.6e-17 92.0 50 76.0
BcaC05g30553 Brassica carinata HOM05D006056 ORTHO05D007136 3.6e-17 92.0 50 76.0
BNapus_Darmor_BZH_scaffold_117p00040 Brassica napus HOM05D006056 ORTHO05D007136 3.6e-17 92.0 50 76.0
C05p60560 Brassica napus HOM05D006056 ORTHO05D007136 3.6e-17 92.0 50 76.0
BolC5t34710H Brassica oleracea HOM05D006056 ORTHO05D007136 3.6e-17 92.0 69 62.3
BraA05t22856Z Brassica rapa HOM05D006056 ORTHO05D007136 3.6e-17 92.0 69 62.3
Sp3g05700 Schrenkiella parvula HOM05D006056 ORTHO05D007136 3.6e-17 92.0 50 76.0
Hma1.2p1_0837F.1_g226030 Hydrangea macrophylla HOM05D006056 ORTHO05D007136 8.1e-17 90.9 52 76.9
Ca_12968_v3 Cicer arietinum L. HOM05D006056 ORTHO05D007136 1.4e-16 90.1 52 78.8
BcaC09g47915 Brassica carinata HOM05D006056 ORTHO05D007136 1.8e-16 89.7 50 72.0
BolC1t05590H Brassica oleracea HOM05D006056 ORTHO05D007136 1.8e-16 89.7 50 72.0
CDE05G0697 Ceratophyllum demersum HOM05D006056 ORTHO05D007136 3.1e-16 89.0 62 64.5
BraA01t04419Z Brassica rapa HOM05D006056 ORTHO05D007136 4.0e-16 88.6 50 70.0
ECA248G1356 Erigeron canadensis HOM05D006056 ORTHO05D007136 4.0e-16 88.6 104 50.0
Hma1.2p1_0837F.1_g226040 Hydrangea macrophylla HOM05D006056 ORTHO05D007136 5.2e-16 88.2 49 77.6
Actinidia12748 Actinidia chinensis HOM05D006056 ORTHO05D007136 8.9e-16 87.4 100 54.0
MD05G1114000 Malus domestica HOM05D006056 ORTHO05D007136 2.9e-14 82.4 85 49.4
Gohir.A10G186600 Gossypium hirsutum HOM05D006056 ORTHO05D007136 4.9e-14 81.6 87 52.9
MBI13_g23031_MAGBIO Magnolia biondii HOM05D006056 ORTHO05D007136 1.9e-13 79.7 89 47.2
Os08g0378900 Oryza sativa ssp. japonica HOM05D006056 ORTHO05D007136 1.9e-13 79.7 44 72.7
Zm00001eb042600 Zea mays HOM05D006056 ORTHO05D007136 4.1e-13 78.6 92 47.8
HPP92_023265 Vanilla planifolia HOM05D002937 ORTHO05D003063 1.3e-11 73.6 64 53.1
SalBow6G4451 Salvia bowleyana HOM05D009903 ORTHO05D007136 2.3e-11 72.8 34 91.2
ATR0782G243 Amborella trichopoda HOM05D006056 ORTHO05D007136 3.9e-11 72.0 69 52.2
HPP92_023300 Vanilla planifolia HOM05D002937 ORTHO05D003063 5.1e-11 71.6 64 51.6
Medtr1g037680 Medicago truncatula HOM05D006056 ORTHO05D007136 1.6e-09 66.6 31 93.5
CARHR081330 Cardamine hirsuta HOM05D006056 ORTHO05D007136 8.1e-09 64.3 31 87.1
Pp3c1_18440 Physcomitrium patens HOM05D006056 ORTHO05D007136 6.8e-08 61.2 35 62.9
SEGI_00494 Sequoiadendron giganteum HOM05D006056 ORTHO05D007136 8.9e-08 60.8 43 51.2
Lj9A658G61 Lonicera japonica HOM05D006056 ORTHO05D007136 1.5e-07 60.1 31 87.1
Aqoxy1G00370 Aquilegia oxysepala HOM05D006056 ORTHO05D007136 2.0e-07 59.7 96 36.5
SalBow1G6848 Salvia bowleyana HOM05D013928 ORTHO05D003042 3.8e-06 55.5 50 56.0
CBR_g51450 Chara braunii HOM05D006056 ORTHO05D007136 6.4e-06 54.7 65 41.5
SalBow5G5606 Salvia bowleyana HOM05D009903 ORTHO05D014256 8.4e-06 54.3 24 95.8


User provided reference genes

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