Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G0301 Salvia bowleyana HOM05D005452 ORTHO05D006618 4.8e-92 341.3 189 100.0
SalBow6G4340 Salvia bowleyana HOM05D005452 ORTHO05D006618 3.4e-53 212.2 145 83.4
SalBow6G5661 Salvia bowleyana HOM05D005452 ORTHO05D006618 1.2e-50 203.8 198 65.2
SalBow6G1267 Salvia bowleyana HOM05D005452 ORTHO05D006618 9.2e-43 177.6 97 100.0
SalBow6G2856 Salvia bowleyana HOM05D005452 ORTHO05D006618 9.2e-43 177.6 97 100.0
SalBow6G0335 Salvia bowleyana HOM05D005452 ORTHO05D006618 2.7e-42 176.0 97 99.0
SalBow6G6484 Salvia bowleyana HOM05D005452 ORTHO05D006618 4.3e-40 168.7 97 96.9
SalBow6G3385 Salvia bowleyana HOM05D005452 ORTHO05D006618 3.6e-39 165.6 93 97.8
SalBow6G4107 Salvia bowleyana HOM05D005452 ORTHO05D006618 7.1e-35 151.4 83 100.0
SalBow6G4977 Salvia bowleyana HOM05D005452 ORTHO05D006618 7.1e-35 151.4 83 100.0
SGA_v2.0_scaffold12G06036 Striga asiatica HOM05D005452 ORTHO05D006618 3.8e-28 129.0 100 76.0
SGA_v2.0_scaffold293G47424 Striga asiatica HOM05D005452 ORTHO05D006618 4.9e-28 128.6 107 72.0
unitig_22.g6942 Utricularia gibba HOM05D005452 ORTHO05D006618 2.3e-25 119.8 102 69.6
HanXRQChr12g0371911 Helianthus annuus HOM05D005452 ORTHO05D006618 6.7e-25 118.2 84 73.8
GSVIVG01003295001 Vitis vinifera HOM05D005452 ORTHO05D006618 6.7e-25 118.2 84 75.0
ECA233G5110 Erigeron canadensis HOM05D005452 ORTHO05D006618 1.5e-24 117.1 84 75.0
Lalb_Chr03g0040661 Lupinus albus HOM05D005452 ORTHO05D006618 1.9e-24 116.7 79 81.0
Dinv15209 Davidia involucrata HOM05D005452 ORTHO05D006618 2.5e-24 116.3 89 70.8
Migut.K00615 Erythranthe guttata HOM05D005452 ORTHO05D006618 2.5e-24 116.3 100 71.0
Lj4g0014743 Lotus japonicus HOM05D005452 ORTHO05D006618 2.5e-24 116.3 79 77.2
Lj5g0027337 Lotus japonicus HOM05D005452 ORTHO05D006618 2.5e-24 116.3 79 77.2
Nitab4.5_0000524g0050 Nicotiana tabacum HOM05D005452 ORTHO05D006618 2.5e-24 116.3 87 72.4
Nitab4.5_0002322g0150 Nicotiana tabacum HOM05D001410 ORTHO05D006618 2.5e-24 116.3 89 73.0
Lsat_1_v5_gn_8_152800 Lactuca sativa HOM05D005452 ORTHO05D006618 3.3e-24 115.9 92 67.4
Oeu056705.1 Olea europaea HOM05D005452 ORTHO05D006618 4.3e-24 115.5 84 76.2
Lalb_Chr01g0021741 Lupinus albus HOM05D005452 ORTHO05D006618 5.6e-24 115.2 78 80.8
Hma1.2p1_0079F.1_g041110 Hydrangea macrophylla HOM05D005452 ORTHO05D006618 9.6e-24 114.4 91 72.5
VMungo1080G1735 Vigna mungo HOM05D005452 ORTHO05D006618 9.6e-24 114.4 79 75.9
CSS0031935 Camellia sinensis var. sinensis HOM05D005452 ORTHO05D006618 1.3e-23 114.0 84 76.2
Glyma.09G244200 Glycine max HOM05D005452 ORTHO05D006618 1.3e-23 114.0 79 77.2
Lsat_1_v5_gn_4_85301 Lactuca sativa HOM05D005452 ORTHO05D006618 1.3e-23 114.0 84 72.6
Solyc10g054060.2 Solanum lycopersicum HOM05D005452 ORTHO05D006618 1.3e-23 114.0 81 76.5
Ciclev10033123m.g Citrus clementina HOM05D005452 ORTHO05D006618 1.6e-23 113.6 79 77.2
Nitab4.5_0004217g0010 Nicotiana tabacum HOM05D001410 ORTHO05D006618 2.1e-23 113.2 83 75.9
FvH4_5g21170 Fragaria vesca HOM05D005452 ORTHO05D006618 2.8e-23 112.8 85 75.3
Glyma.18G249300 Glycine max HOM05D005452 ORTHO05D006618 2.8e-23 112.8 79 75.9
Sopen10g023920 Solanum pennellii HOM05D005452 ORTHO05D006618 2.8e-23 112.8 79 78.5
ClCG10G012250 Citrullus lanatus HOM05D005452 ORTHO05D006618 3.7e-23 112.5 78 76.9
Medtr3g464760 Medicago truncatula HOM05D005452 ORTHO05D006618 3.7e-23 112.5 79 75.9
Thecc.02G263300 Theobroma cacao HOM05D005452 ORTHO05D006618 3.7e-23 112.5 81 74.1
TAR371G0357 Trochodendron aralioides HOM05D005452 ORTHO05D006618 3.7e-23 112.5 84 71.4
TAR629G2696 Trochodendron aralioides HOM05D005452 ORTHO05D006618 3.7e-23 112.5 84 71.4
Lj3C54T6 Lonicera japonica HOM05D005452 ORTHO05D006618 4.8e-23 112.1 83 72.3
Ca_14963_v3 Cicer arietinum L. HOM05D005452 ORTHO05D006618 6.2e-23 111.7 79 75.9
Psat5g193600 Pisum sativum HOM05D005452 ORTHO05D006618 6.2e-23 111.7 82 74.4
Sc04g0009650 Simmondsia chinensis HOM05D005452 ORTHO05D006618 6.2e-23 111.7 84 72.6
VMungo1383G1569 Vigna mungo HOM05D005452 ORTHO05D006618 6.2e-23 111.7 79 75.9
CiPaw.04G056800 Carya illinoinensis HOM05D005452 ORTHO05D006618 8.1e-23 111.3 79 75.9
AUR62024237 Chenopodium quinoa HOM05D005452 ORTHO05D006618 8.1e-23 111.3 85 72.9
COL.COLO4_23485 Corchorus olitorius HOM05D005452 ORTHO05D006618 8.1e-23 111.3 81 72.8
FAN13G0782 Fragaria x ananassa HOM05D005452 ORTHO05D006618 1.1e-22 110.9 85 74.1
AUR62005503 Chenopodium quinoa HOM05D005452 ORTHO05D006618 1.4e-22 110.5 86 72.1
Prupe.5G046400 Prunus persica HOM05D005452 ORTHO05D006618 1.4e-22 110.5 78 76.9
SalBow6G2133 Salvia bowleyana HOM05D009895 ORTHO05D006618 1.4e-22 110.5 62 91.9
vmacro06707 Vaccinium macrocarpon HOM05D005452 ORTHO05D006618 1.4e-22 110.5 82 73.2
Actinidia08127 Actinidia chinensis HOM05D005452 ORTHO05D006618 1.8e-22 110.2 84 73.8
CiPaw.05G172100 Carya illinoinensis HOM05D005452 ORTHO05D006618 1.8e-22 110.2 79 75.9
Duzib268G1139 Durio zibethinus HOM05D005452 ORTHO05D006618 1.8e-22 110.2 79 74.7
FAN04G1087 Fragaria x ananassa HOM05D005452 ORTHO05D006618 1.8e-22 110.2 90 71.1
FAN08G2976 Fragaria x ananassa HOM05D005452 ORTHO05D006618 1.8e-22 110.2 90 71.1
PGR102G3216 Punica granatum HOM05D005452 ORTHO05D006618 1.8e-22 110.2 80 75.0
EL10Ac5g10516 Beta vulgaris HOM05D005452 ORTHO05D006618 2.4e-22 109.8 84 69.0
CANSAT11G1680 Cannabis sativa HOM05D005452 ORTHO05D006618 2.4e-22 109.8 82 69.5
Rhsim12G0039600 Rhododendron simsii HOM05D005452 ORTHO05D006618 2.4e-22 109.8 85 71.8
RcHm_v2.0_Chr7g0208311 Rosa chinensis HOM05D005452 ORTHO05D006618 2.4e-22 109.8 78 75.6
TPR.G32914 Trifolium pratense HOM05D005452 ORTHO05D006618 2.4e-22 109.8 79 74.7
DCAR_003344 Daucus carota HOM05D005452 ORTHO05D006618 3.1e-22 109.4 84 69.0
QL03p056962 Quercus lobata HOM05D005452 ORTHO05D006618 4.0e-22 109.0 77 76.6
Peaxi162Scf00128g00434 Petunia axillaris HOM05D005452 ORTHO05D006618 5.3e-22 108.6 78 74.4
Hund06040 Selenicereus undatus HOM05D005452 ORTHO05D006618 5.3e-22 108.6 81 74.1
Actinidia01359 Actinidia chinensis HOM05D005452 ORTHO05D006618 6.9e-22 108.2 79 74.7
Manes.13G021600 Manihot esculenta HOM05D005452 ORTHO05D006618 6.9e-22 108.2 83 68.7
Peaxi162Scf00067g00116 Petunia axillaris HOM05D005452 ORTHO05D006618 6.9e-22 108.2 81 71.6
Phvul.008G048300 Phaseolus vulgaris HOM05D005452 ORTHO05D006618 6.9e-22 108.2 79 72.2
FAN18G0628 Fragaria x ananassa HOM05D005452 ORTHO05D006618 9.0e-22 107.8 83 72.3
Hund25399 Selenicereus undatus HOM05D005452 ORTHO05D006618 9.0e-22 107.8 82 70.7
MD06G1040200 Malus domestica HOM05D005452 ORTHO05D006618 1.5e-21 107.1 82 69.5
MD09G1284200 Malus domestica HOM05D005452 ORTHO05D006618 2.0e-21 106.7 78 73.1
Aa31LG2G6150 Aethionema arabicum HOM05D005452 ORTHO05D006618 2.6e-21 106.3 99 62.6
THA.LOC104824009 Tarenaya hassleriana HOM05D005452 ORTHO05D006618 2.6e-21 106.3 79 69.6
CAN.G128.103 Capsicum annuum HOM05D005452 ORTHO05D000001 3.4e-21 105.9 153 45.8
MELO3C030920.2 Cucumis melo HOM05D005452 ORTHO05D006618 3.4e-21 105.9 80 70.0
THA.LOC104805276 Tarenaya hassleriana HOM05D005452 ORTHO05D006618 3.4e-21 105.9 92 64.1
Atru.chr11.2163 Acer truncatum HOM05D005452 ORTHO05D006618 5.8e-21 105.1 79 68.4
Eucgr.B03269 Eucalyptus grandis HOM05D005452 ORTHO05D006618 5.8e-21 105.1 78 74.4
Carub.0005s0428 Capsella rubella HOM05D005452 ORTHO05D006618 7.6e-21 104.8 95 62.1
C07p35420 Brassica napus HOM05D005452 ORTHO05D006618 9.9e-21 104.4 88 62.5
Sed0011581 Sechium edule HOM05D005452 ORTHO05D006618 9.9e-21 104.4 83 67.5
AL5G15130 Arabidopsis lyrata HOM05D005452 ORTHO05D006618 1.3e-20 104.0 92 60.9
Gohir.A05G223400 Gossypium hirsutum HOM05D005452 ORTHO05D006618 1.3e-20 104.0 81 69.1
Gorai.009G233700 Gossypium raimondii HOM05D005452 ORTHO05D006618 1.3e-20 104.0 81 69.1
Haze_12270 Corylus avellana HOM05D004112 ORTHO05D004739 1.7e-20 103.6 81 69.1
Thhalv10005186m.g Eutrema salsugineum HOM05D005452 ORTHO05D006618 1.7e-20 103.6 94 61.7
A06p42060 Brassica napus HOM05D005452 ORTHO05D006618 2.2e-20 103.2 94 61.7
BraA06t27123Z Brassica rapa HOM05D005452 ORTHO05D006618 2.2e-20 103.2 94 61.7
Sabra10G0020400 Salix brachista HOM05D004112 ORTHO05D004739 2.2e-20 103.2 79 68.4
BolC7t44066H Brassica oleracea HOM05D005452 ORTHO05D006618 2.9e-20 102.8 84 64.3
Sp2g15510 Schrenkiella parvula HOM05D005452 ORTHO05D006618 2.9e-20 102.8 95 61.1
CsaV3_3G032030 Cucumis sativus L. HOM05D005452 ORTHO05D006618 3.8e-20 102.4 78 69.2
Thhalv10005184m.g Eutrema salsugineum HOM05D005452 ORTHO05D006618 3.8e-20 102.4 94 60.6
MD02G1109400 Malus domestica HOM05D005452 ORTHO05D006618 3.8e-20 102.4 78 69.2
AT3G26360 Arabidopsis thaliana HOM05D005452 ORTHO05D006618 4.9e-20 102.1 84 63.1
C02p52850 Brassica napus HOM05D005452 ORTHO05D006618 4.9e-20 102.1 101 58.4
BcaB07g30231 Brassica carinata HOM05D005452 ORTHO05D006618 6.4e-20 101.7 94 60.6
BcaC03g17336 Brassica carinata HOM05D005452 ORTHO05D006618 6.4e-20 101.7 94 60.6
A02p34530 Brassica napus HOM05D005452 ORTHO05D006618 6.4e-20 101.7 94 60.6
BraA02t08463Z Brassica rapa HOM05D005452 ORTHO05D006618 6.4e-20 101.7 94 60.6
Lj4g0021307 Lotus japonicus HOM05D005452 ORTHO05D006618 8.4e-20 101.3 88 63.6
Potri.010G048600 Populus trichocarpa HOM05D005452 ORTHO05D006618 8.4e-20 101.3 79 67.1
ATR0691G211 Amborella trichopoda HOM05D005452 ORTHO05D006618 1.4e-19 100.5 88 63.6
Cfa009234 Carpinus fangiana HOM05D005452 ORTHO05D006618 1.4e-19 100.5 78 70.5
Cpa.g.c31584 Carica papaya HOM05D005452 ORTHO05D006618 2.5e-19 99.8 78 69.2
Oeu049174.1 Olea europaea HOM05D005452 ORTHO05D006618 5.5e-19 98.6 84 69.0
TWI36G1628 Tripterygium wilfordii HOM05D005452 ORTHO05D006618 7.1e-19 98.2 79 65.8
BolC2t11364H Brassica oleracea HOM05D005452 ORTHO05D006618 9.3e-19 97.8 101 56.4
Gohir.D05G226100 Gossypium hirsutum HOM05D005452 ORTHO05D006618 1.6e-18 97.1 75 69.3
SHI03748 Sapria himalayana HOM05D005452 ORTHO05D006618 1.6e-18 97.1 93 60.2
TWI18G1019 Tripterygium wilfordii HOM05D005452 ORTHO05D006618 2.1e-18 96.7 107 53.3
CDE10G1265 Ceratophyllum demersum HOM05D005452 ORTHO05D006618 2.7e-18 96.3 88 58.0
SalBow6G0426 Salvia bowleyana HOM05D005452 ORTHO05D006618 2.7e-18 96.3 54 92.6
MBI15_g04991_MAGBIO Magnolia biondii HOM05D005452 ORTHO05D006618 3.5e-18 95.9 77 66.2
Aqoxy3G01257 Aquilegia oxysepala HOM05D005452 ORTHO05D006618 6.0e-18 95.1 84 58.3
HPP92_017381 Vanilla planifolia HOM05D005452 ORTHO05D006618 6.0e-18 95.1 82 61.0
Nn1g08774 Nelumbo nucifera HOM05D005452 ORTHO05D006618 7.9e-18 94.7 84 58.3
CARHR147370 Cardamine hirsuta HOM05D005452 ORTHO05D006618 1.0e-17 94.4 95 57.9
PSO210G2974 Papaver somniferum HOM05D005452 ORTHO05D006618 1.8e-17 93.6 84 59.5
PSO017G6805 Papaver somniferum HOM05D005452 ORTHO05D006618 3.0e-17 92.8 84 58.3
Cc01_g03580 Coffea canephora HOM05D005452 ORTHO05D006618 1.9e-16 90.1 84 60.7
MD04G1159200 Malus domestica HOM05D005452 ORTHO05D006618 2.5e-16 89.7 79 64.6
MD12G1125700 Malus domestica HOM05D005452 ORTHO05D006618 1.3e-15 87.4 79 63.3
SEGI_39778 Sequoiadendron giganteum HOM05D005452 ORTHO05D006618 5.3e-14 82.0 78 57.7
Zm00001eb217020 Zea mays HOM05D005452 ORTHO05D006618 6.9e-14 81.6 79 54.4
SEGI_27388 Sequoiadendron giganteum HOM05D005452 ORTHO05D006618 9.0e-14 81.3 78 57.7
Zm00001eb053730 Zea mays HOM05D005452 ORTHO05D006618 2.0e-13 80.1 79 54.4
vmacro01118 Vaccinium macrocarpon HOM05D005452 ORTHO05D006618 4.5e-13 79.0 65 66.2
Os03g0694700 Oryza sativa ssp. japonica HOM05D005452 ORTHO05D006618 6.5e-12 75.1 84 52.4
MBI15_g11303_MAGBIO Magnolia biondii HOM05D005452 ORTHO05D006618 4.2e-11 72.4 82 54.9
Zm00001eb217070 Zea mays HOM05D000876 ORTHO05D000285 9.3e-11 71.2 90 45.6
Medtr3g450960 Medicago truncatula HOM05D005452 ORTHO05D006618 1.8e-09 67.0 68 61.8
unitig_8.g2920 Utricularia gibba HOM05D005452 ORTHO05D006618 5.1e-09 65.5 53 67.9
Nn1g09342 Nelumbo nucifera HOM05D005452 ORTHO05D006618 5.3e-06 55.5 60 50.0


User provided reference genes

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