Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G0300 Salvia bowleyana HOM05D003621 ORTHO05D004259 7.1e-188 660.6 334 100.0
SalBow6G4876 Salvia bowleyana HOM05D003621 ORTHO05D004259 4.1e-151 538.5 282 95.7
SalBow6G6039 Salvia bowleyana HOM05D003621 ORTHO05D004259 3.4e-142 508.8 308 85.1
SalBow6G3329 Salvia bowleyana HOM05D003621 ORTHO05D004259 2.9e-141 505.8 295 88.5
SalBow6G5466 Salvia bowleyana HOM05D003621 ORTHO05D000122 2.0e-134 483.0 289 86.2
SalBow6G2522 Salvia bowleyana HOM05D003621 ORTHO05D004259 2.7e-126 456.1 311 77.2
SalBow6G4774 Salvia bowleyana HOM05D003621 ORTHO05D004259 7.2e-124 448.0 308 77.9
SalBow6G1987 Salvia bowleyana HOM05D003621 ORTHO05D004259 2.8e-120 436.0 282 80.1
Migut.J01116 Erythranthe guttata HOM05D003621 ORTHO05D004259 1.8e-119 433.3 287 76.0
Migut.J01110 Erythranthe guttata HOM05D003621 ORTHO05D004259 1.1e-116 424.1 334 66.8
Migut.J01117 Erythranthe guttata HOM05D003621 ORTHO05D004259 7.2e-116 421.4 305 71.1
Migut.J01112 Erythranthe guttata HOM05D003621 ORTHO05D004259 1.2e-115 420.6 283 74.6
Migut.J01104 Erythranthe guttata HOM05D003621 ORTHO05D004259 2.3e-114 416.4 300 72.7
SalBow6G3888 Salvia bowleyana HOM05D003621 ORTHO05D004259 4.0e-114 415.6 285 76.8
Migut.J01147 Erythranthe guttata HOM05D003621 ORTHO05D004259 8.8e-114 414.5 317 69.4
Migut.J01113 Erythranthe guttata HOM05D003621 ORTHO05D004259 1.2e-113 414.1 285 72.6
Migut.J01103 Erythranthe guttata HOM05D003621 ORTHO05D004259 1.7e-112 410.2 281 75.1
SGA_v2.0_scaffold10G05155 Striga asiatica HOM05D003621 ORTHO05D004259 3.1e-111 406.0 288 71.2
Migut.J01118 Erythranthe guttata HOM05D003621 ORTHO05D004259 4.1e-111 405.6 309 68.6
Migut.G00929 Erythranthe guttata HOM05D003621 ORTHO05D004259 1.1e-108 397.5 307 67.8
Migut.J01119 Erythranthe guttata HOM05D003621 ORTHO05D004259 1.6e-107 393.7 284 70.4
Oeu064901.1 Olea europaea HOM05D003621 ORTHO05D004259 8.0e-107 391.3 313 65.2
Migut.J01111 Erythranthe guttata HOM05D003621 ORTHO05D004259 3.7e-104 382.5 279 68.5
Hma1.2p1_0018F.1_g013590 Hydrangea macrophylla HOM05D003621 ORTHO05D004259 2.3e-101 373.2 319 63.0
Sopen07g012210 Solanum pennellii HOM05D003621 ORTHO05D004259 3.3e-100 369.4 299 65.2
Nitab4.5_0000114g0080 Nicotiana tabacum HOM05D003621 ORTHO05D004259 7.3e-100 368.2 299 64.5
Peaxi162Scf00231g00033 Petunia axillaris HOM05D003621 ORTHO05D004259 1.2e-99 367.5 299 65.9
PGSC0003DMG400030220 Solanum tuberosum HOM05D003621 ORTHO05D004259 3.6e-99 365.9 299 64.9
CSS0004511 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 8.0e-99 364.8 299 64.9
Dinv41608 Davidia involucrata HOM05D003621 ORTHO05D004259 1.0e-98 364.4 319 61.8
Lj7A651T32 Lonicera japonica HOM05D003621 ORTHO05D004259 1.0e-98 364.4 299 64.5
Peaxi162Scf00546g00023 Petunia axillaris HOM05D003621 ORTHO05D004259 1.0e-98 364.4 299 64.9
Hund09208 Selenicereus undatus HOM05D003621 ORTHO05D004259 1.0e-98 364.4 299 63.2
CAN.G1529.8 Capsicum annuum HOM05D003621 ORTHO05D004259 1.4e-98 364.0 299 64.5
Duzib168G1477 Durio zibethinus HOM05D003621 ORTHO05D004259 1.4e-98 364.0 299 63.9
Actinidia09421 Actinidia chinensis HOM05D003621 ORTHO05D004259 1.8e-98 363.6 297 65.3
Thecc.09G109600 Theobroma cacao HOM05D003621 ORTHO05D004259 1.8e-98 363.6 299 63.5
Gohir.A07G006000 Gossypium hirsutum HOM05D003621 ORTHO05D004259 5.2e-98 362.1 296 63.9
Ah.14g082090 Amaranthus hybridus HOM05D003621 ORTHO05D004259 6.8e-98 361.7 296 62.8
Cpa.g.sc23.101 Carica papaya HOM05D003621 ORTHO05D004259 6.8e-98 361.7 299 62.9
HanXRQChr10g0318561 Helianthus annuus HOM05D003621 ORTHO05D004259 6.8e-98 361.7 296 64.2
Oeu044981.1 Olea europaea HOM05D003621 ORTHO05D004259 6.8e-98 361.7 299 64.5
MSTRG.19588 Avicennia marina HOM05D003621 ORTHO05D004259 1.2e-97 360.9 299 64.2
HanXRQChr09g0239661 Helianthus annuus HOM05D003621 ORTHO05D004259 1.2e-97 360.9 310 62.3
Gorai.001G005600 Gossypium raimondii HOM05D003621 ORTHO05D004259 1.5e-97 360.5 296 63.5
Sopen12g003080 Solanum pennellii HOM05D003621 ORTHO05D004259 1.5e-97 360.5 299 64.2
PGSC0003DMG400000311 Solanum tuberosum HOM05D003621 ORTHO05D004259 1.5e-97 360.5 299 64.2
Ciclev10008142m.g Citrus clementina HOM05D003621 ORTHO05D004259 2.0e-97 360.1 298 62.8
ECA240G2782 Erigeron canadensis HOM05D003621 ORTHO05D004259 2.6e-97 359.8 314 61.8
Nitab4.5_0005947g0020 Nicotiana tabacum HOM05D003621 ORTHO05D004259 2.6e-97 359.8 299 64.2
vmacro06217 Vaccinium macrocarpon HOM05D003621 ORTHO05D004259 2.6e-97 359.8 297 64.3
Dinv36637 Davidia involucrata HOM05D003621 ORTHO05D004259 3.4e-97 359.4 297 64.6
Solyc12g007100.2 Solanum lycopersicum HOM05D003621 ORTHO05D004259 3.4e-97 359.4 299 63.9
Nitab4.5_0002904g0090 Nicotiana tabacum HOM05D003621 ORTHO05D004259 4.4e-97 359.0 299 63.9
RhsimUnG0196500 Rhododendron simsii HOM05D003621 ORTHO05D004259 4.4e-97 359.0 297 64.0
COL.COLO4_34873 Corchorus olitorius HOM05D003621 ORTHO05D004259 5.8e-97 358.6 297 63.0
Gohir.D07G006000 Gossypium hirsutum HOM05D003621 ORTHO05D004259 5.8e-97 358.6 296 63.2
Eucgr.C01036 Eucalyptus grandis HOM05D003621 ORTHO05D004259 7.5e-97 358.2 299 62.9
AUR62010986 Chenopodium quinoa HOM05D003621 ORTHO05D004259 9.8e-97 357.8 299 62.5
Gohir.D13G202000 Gossypium hirsutum HOM05D003621 ORTHO05D004259 1.3e-96 357.5 299 62.9
Gorai.013G230900 Gossypium raimondii HOM05D003621 ORTHO05D004259 1.3e-96 357.5 299 62.9
AUR62021495 Chenopodium quinoa HOM05D003621 ORTHO05D004259 1.7e-96 357.1 299 62.2
CSS0027044 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 2.2e-96 356.7 299 63.9
Cfa021562 Carpinus fangiana HOM05D003621 ORTHO05D004259 2.2e-96 356.7 316 60.8
QL02p085200 Quercus lobata HOM05D003621 ORTHO05D004259 2.2e-96 356.7 319 60.5
Haze_25731 Corylus avellana HOM05D003621 ORTHO05D004259 2.9e-96 356.3 296 63.9
Lj2g0018985 Lotus japonicus HOM05D003621 ORTHO05D004259 3.7e-96 355.9 299 62.5
Manes.16G115500 Manihot esculenta HOM05D003621 ORTHO05D004259 3.7e-96 355.9 299 61.9
Medtr6g088470 Medicago truncatula HOM05D003621 ORTHO05D004259 3.7e-96 355.9 296 63.5
Atru.chr7.1358 Acer truncatum HOM05D003621 ORTHO05D004259 4.9e-96 355.5 298 63.1
CSS0049361 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 4.9e-96 355.5 299 63.5
Haze_25724 Corylus avellana HOM05D003621 ORTHO05D004259 6.4e-96 355.1 296 63.5
Migut.J01155 Erythranthe guttata HOM05D003621 ORTHO05D004259 6.4e-96 355.1 299 63.9
Sc08g0007530 Simmondsia chinensis HOM05D003621 ORTHO05D004259 6.4e-96 355.1 299 63.2
GSVIVG01015385001 Vitis vinifera HOM05D003621 ORTHO05D004259 6.4e-96 355.1 319 60.5
Duzib187G1605 Durio zibethinus HOM05D003621 ORTHO05D004259 1.1e-95 354.4 299 62.2
Glyma.09G191100 Glycine max HOM05D003621 ORTHO05D004259 1.1e-95 354.4 299 62.5
Aa31sc99G150 Aethionema arabicum HOM05D003621 ORTHO05D004259 1.4e-95 354.0 300 62.3
Thhalv10002506m.g Eutrema salsugineum HOM05D003621 ORTHO05D004259 1.4e-95 354.0 296 62.5
Ca_03977_v3 Cicer arietinum L. HOM05D003621 ORTHO05D004259 1.9e-95 353.6 296 62.8
Glyma.07G085800 Glycine max HOM05D003621 ORTHO05D004259 1.9e-95 353.6 299 62.9
Gohir.A13G196700 Gossypium hirsutum HOM05D003621 ORTHO05D004259 3.2e-95 352.8 299 61.9
Prupe.7G232000 Prunus persica HOM05D003621 ORTHO05D004259 3.2e-95 352.8 313 60.7
THA.LOC104808764 Tarenaya hassleriana HOM05D003621 ORTHO05D004259 3.2e-95 352.8 299 62.2
DCAR_028707 Daucus carota HOM05D003621 ORTHO05D004259 4.1e-95 352.4 301 62.5
Sp3g22320 Schrenkiella parvula HOM05D003621 ORTHO05D004259 4.1e-95 352.4 296 62.2
TPR.G25311 Trifolium pratense HOM05D003621 ORTHO05D004259 4.1e-95 352.4 296 62.8
BcaB06g26656 Brassica carinata HOM05D003621 ORTHO05D004259 5.4e-95 352.1 296 61.8
Nn2g11728 Nelumbo nucifera HOM05D003621 ORTHO05D004259 5.4e-95 352.1 319 59.9
Lalb_Chr24g0397591 Lupinus albus HOM05D003621 ORTHO05D004259 7.0e-95 351.7 299 61.9
Potri.018G081000 Populus trichocarpa HOM05D003621 ORTHO05D004259 7.0e-95 351.7 299 61.9
TAR624G1386 Trochodendron aralioides HOM05D003621 ORTHO05D004259 7.0e-95 351.7 299 62.9
TAR636G2961 Trochodendron aralioides HOM05D003621 ORTHO05D004259 7.0e-95 351.7 299 63.5
VMungo0464G0841 Vigna mungo HOM05D003621 ORTHO05D004259 7.0e-95 351.7 299 63.2
CiPaw.04G163500 Carya illinoinensis HOM05D003621 ORTHO05D004259 9.2e-95 351.3 296 62.5
RcHm_v2.0_Chr2g0090311 Rosa chinensis HOM05D003621 ORTHO05D004259 9.2e-95 351.3 299 62.5
Aa31sc29G80 Aethionema arabicum HOM05D003621 ORTHO05D004259 1.2e-94 350.9 299 60.9
BcaC06g35719 Brassica carinata HOM05D003621 ORTHO05D004259 1.2e-94 350.9 296 61.8
A07p07780 Brassica napus HOM05D003621 ORTHO05D004259 1.2e-94 350.9 296 61.8
C07p11700 Brassica napus HOM05D003621 ORTHO05D004259 1.2e-94 350.9 296 61.8
BolC7t41643H Brassica oleracea HOM05D003621 ORTHO05D004259 1.2e-94 350.9 296 61.8
BraA07t28569Z Brassica rapa HOM05D003621 ORTHO05D004259 1.2e-94 350.9 296 61.8
Cc06_g09720 Coffea canephora HOM05D003621 ORTHO05D004259 1.2e-94 350.9 296 62.8
Lsat_1_v5_gn_7_40780 Lactuca sativa HOM05D003621 ORTHO05D004259 1.2e-94 350.9 316 60.4
CiPaw.03G231600 Carya illinoinensis HOM05D003621 ORTHO05D004259 1.6e-94 350.5 299 61.2
TWI63G0694 Tripterygium wilfordii HOM05D003621 ORTHO05D004259 1.6e-94 350.5 299 61.2
EL10Ac8g18488 Beta vulgaris HOM05D003621 ORTHO05D004259 2.0e-94 350.1 299 61.2
PSO782G0111 Papaver somniferum HOM05D003621 ORTHO05D004259 2.0e-94 350.1 299 62.2
Phvul.004G163800 Phaseolus vulgaris HOM05D003621 ORTHO05D004259 2.0e-94 350.1 299 62.5
Carub.0003s2492 Capsella rubella HOM05D003621 ORTHO05D004259 2.7e-94 349.7 296 61.8
CDE08G0484 Ceratophyllum demersum HOM05D003621 ORTHO05D004259 2.7e-94 349.7 283 63.6
CsaV3_3G015870 Cucumis sativus L. HOM05D003621 ORTHO05D004259 2.7e-94 349.7 299 62.5
CARHR100670 Cardamine hirsuta HOM05D003621 ORTHO05D004259 3.5e-94 349.4 296 61.5
MELO3C006786.2 Cucumis melo HOM05D003621 ORTHO05D004259 3.5e-94 349.4 299 62.5
Lalb_Chr14g0371541 Lupinus albus HOM05D003621 ORTHO05D004259 3.5e-94 349.4 299 62.2
MD15G1184200 Malus domestica HOM05D003621 ORTHO05D004259 3.5e-94 349.4 297 62.0
Nn8g39169 Nelumbo nucifera HOM05D003621 ORTHO05D004259 3.5e-94 349.4 319 60.8
Potri.006G158600 Populus trichocarpa HOM05D003621 ORTHO05D004259 3.5e-94 349.4 299 62.2
PSO832G1684 Papaver somniferum HOM05D003621 ORTHO05D004259 4.6e-94 349.0 299 62.2
Sabra18G0068200 Salix brachista HOM05D003621 ORTHO05D004259 4.6e-94 349.0 299 61.2
Psat1g042960 Pisum sativum HOM05D003621 ORTHO05D004259 6.0e-94 348.6 296 61.8
PGR142G3711 Punica granatum HOM05D003621 ORTHO05D004259 7.8e-94 348.2 299 61.9
TWI34G1138 Tripterygium wilfordii HOM05D003621 ORTHO05D004259 7.8e-94 348.2 299 60.9
Hund26199 Selenicereus undatus HOM05D003621 ORTHO05D004259 1.0e-93 347.8 338 56.2
AL3G40070 Arabidopsis lyrata HOM05D003621 ORTHO05D004259 1.3e-93 347.4 296 61.1
AT3G24530 Arabidopsis thaliana HOM05D003621 ORTHO05D004259 1.3e-93 347.4 296 61.1
FAN26G0011 Fragaria x ananassa HOM05D003621 ORTHO05D004259 1.3e-93 347.4 283 64.3
ATR0315G144 Amborella trichopoda HOM05D003621 ORTHO05D004259 1.7e-93 347.1 283 63.3
FvH4_1g04710 Fragaria vesca HOM05D003621 ORTHO05D004259 2.3e-93 346.7 283 64.0
FAN19G2426 Fragaria x ananassa HOM05D003621 ORTHO05D004259 2.3e-93 346.7 283 64.0
FAN23G2072 Fragaria x ananassa HOM05D003621 ORTHO05D004259 3.0e-93 346.3 283 64.3
Sed0008991 Sechium edule HOM05D003621 ORTHO05D004259 3.0e-93 346.3 299 61.2
CDE02G2554 Ceratophyllum demersum HOM05D003621 ORTHO05D004259 6.6e-93 345.1 281 63.0
arahy.Tifrunner.gnm1.ann1.EYQI1F Arachis hypogaea HOM05D003621 ORTHO05D004259 8.6e-93 344.7 297 60.9
arahy.Tifrunner.gnm1.ann1.VSCA53 Arachis hypogaea HOM05D003621 ORTHO05D004259 8.6e-93 344.7 297 60.9
FAN28G1412 Fragaria x ananassa HOM05D003621 ORTHO05D004259 8.6e-93 344.7 283 64.0
MD02G1046000 Malus domestica HOM05D003621 ORTHO05D004259 8.6e-93 344.7 297 61.3
ClCG05G007150 Citrullus lanatus HOM05D003621 ORTHO05D004259 1.1e-92 344.4 299 61.5
Aqoxy7G01646 Aquilegia oxysepala HOM05D003621 ORTHO05D004259 4.3e-92 342.4 283 62.9
Manes.03G021400 Manihot esculenta HOM05D003621 ORTHO05D004259 4.3e-92 342.4 299 60.2
Sed0020967 Sechium edule HOM05D003621 ORTHO05D004259 4.3e-92 342.4 296 61.5
unitig_22.g6628 Utricularia gibba HOM05D003621 ORTHO05D004259 7.3e-92 341.7 317 58.4
HPP92_005264 Vanilla planifolia HOM05D003621 ORTHO05D004259 2.1e-91 340.1 284 60.6
Nitab4.5_0004562g0010 Nicotiana tabacum HOM05D003621 ORTHO05D004259 6.2e-91 338.6 299 60.5
SEGI_35600 Sequoiadendron giganteum HOM05D003621 ORTHO05D004259 2.3e-90 336.7 280 62.1
Solyc07g023990.3 Solanum lycopersicum HOM05D003621 ORTHO05D004259 6.8e-90 335.1 274 63.1
Os02g0266300 Oryza sativa ssp. japonica HOM05D003621 ORTHO05D004259 3.4e-89 332.8 280 61.1
Zm00001eb204000 Zea mays HOM05D003621 ORTHO05D004259 7.5e-89 331.6 285 60.4
vmacro10501 Vaccinium macrocarpon HOM05D003621 ORTHO05D004259 4.6e-86 322.4 298 59.1
SMO367G0606 Selaginella moellendorffii HOM05D003621 ORTHO05D004259 1.3e-85 320.9 314 56.1
SHI02763 Sapria himalayana HOM05D003621 ORTHO05D004259 1.6e-83 313.9 285 57.5
SGA_v2.0_scaffold137G35130 Striga asiatica HOM05D003621 ORTHO05D004259 1.2e-81 307.8 296 55.7
SGA_v2.0_scaffold30G12371 Striga asiatica HOM05D003621 ORTHO05D004259 4.1e-79 299.3 299 56.2
Actinidia32682 Actinidia chinensis HOM05D003621 ORTHO05D004259 4.4e-73 279.3 299 54.2
Aqoxy7G01648 Aquilegia oxysepala HOM05D003621 ORTHO05D004259 3.1e-66 256.5 256 53.9
Aqoxy7G01647 Aquilegia oxysepala HOM05D003621 ORTHO05D004259 9.9e-65 251.5 279 52.7
Nn8g39167 Nelumbo nucifera HOM05D003621 ORTHO05D004259 1.2e-62 244.6 316 49.4
Nn8g39160 Nelumbo nucifera HOM05D003621 ORTHO05D004259 2.9e-48 196.8 190 58.9
Dinv30495 Davidia involucrata HOM05D003621 ORTHO05D004259 1.5e-44 184.5 279 41.2
Hma1.2p1_1455F.1_g284390 Hydrangea macrophylla HOM05D003621 ORTHO05D004259 5.7e-44 182.6 273 41.0
Oeu023080.1 Olea europaea HOM05D003621 ORTHO05D004259 1.2e-41 174.9 123 71.5
SalBow6G0008 Salvia bowleyana HOM05D003621 ORTHO05D004259 6.7e-37 159.1 82 93.9
HanXRQChr16g0522441 Helianthus annuus HOM05D003621 ORTHO05D004259 1.9e-36 157.5 153 52.9
AagrBONN_evm.TU.Sc2ySwM_368.1977 Anthoceros agrestis HOM05D003621 ORTHO05D004259 4.3e-36 156.4 138 58.7
Sabra06G0123800 Salix brachista HOM05D000193 ORTHO05D000402 4.1e-34 149.8 209 46.4
Nn8g39165 Nelumbo nucifera HOM05D003621 ORTHO05D004259 2.6e-33 147.1 138 56.5
Migut.I00952 Erythranthe guttata HOM05D003621 ORTHO05D004259 8.5e-32 142.1 274 35.8
MCO01G086 Micromonas commoda HOM05D003621 ORTHO05D004259 6.1e-30 136.0 184 41.3
Medtr0776s0010 Medicago truncatula HOM05D001546 ORTHO05D004259 1.4e-29 134.8 276 33.0
MSTRG.22673 Avicennia marina HOM05D003621 ORTHO05D004259 3.9e-29 133.3 274 33.9
Cc00_g28820 Coffea canephora HOM05D003621 ORTHO05D004259 7.4e-28 129.0 129 55.8
Aqoxy3G01597 Aquilegia oxysepala HOM05D003621 ORTHO05D004259 1.0e-24 118.6 118 51.7
Cre04.g218900 Chlamydomonas reinhardtii HOM05D003621 ORTHO05D010935 2.2e-24 117.5 190 35.3
Cre04.g219000 Chlamydomonas reinhardtii HOM05D003621 ORTHO05D010935 5.0e-24 116.3 190 35.3
Lsat_1_v5_gn_3_101741 Lactuca sativa HOM05D003621 ORTHO05D004259 2.1e-22 110.9 103 60.2
CSS0016063 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 2.6e-20 104.0 78 66.7
CBR_g46749 Chara braunii HOM05D003621 ORTHO05D004259 1.3e-19 101.7 195 32.3
Hma1.2p1_0001F.1_g001560 Hydrangea macrophylla HOM05D003621 ORTHO05D004259 1.3e-19 101.7 136 39.7
Lsat_1_v5_gn_1_124140 Lactuca sativa HOM05D003621 ORTHO05D004259 1.6e-17 94.7 76 60.5
CSS0042262 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 2.6e-17 94.0 52 80.8
HanXRQChr10g0282301 Helianthus annuus HOM05D003621 ORTHO05D004259 3.6e-14 83.6 78 55.1
BcaB03g14578 Brassica carinata HOM05D003621 ORTHO05D004259 1.1e-10 72.0 96 42.7
Actinidia24746 Actinidia chinensis HOM05D006672 ORTHO05D007769 1.6e-06 58.2 63 47.6


User provided reference genes

Program Settings