Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G0047 Salvia bowleyana HOM05D003644 ORTHO05D004305 2.5e-102 375.6 202 100.0
MSTRG.6013 Avicennia marina HOM05D003644 ORTHO05D004305 6.6e-55 218.0 212 64.6
MSTRG.19571 Avicennia marina HOM05D003644 ORTHO05D004305 3.1e-52 209.1 199 66.8
Oeu015581.1 Olea europaea HOM05D003644 ORTHO05D004305 1.3e-47 193.7 201 58.7
GSVIVG01015346001 Vitis vinifera HOM05D003644 ORTHO05D004305 3.1e-44 182.6 208 53.4
Thecc.09G105500 Theobroma cacao HOM05D003644 ORTHO05D004305 1.4e-41 173.7 212 54.7
Peaxi162Scf00665g00003 Petunia axillaris HOM05D003644 ORTHO05D004305 3.2e-41 172.6 210 53.8
CSS0010496 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 4.2e-41 172.2 208 52.4
CSS0033414 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 4.2e-41 172.2 208 52.4
CSS0008241 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 9.3e-41 171.0 210 55.2
Ciclev10010512m.g Citrus clementina HOM05D003644 ORTHO05D004305 6.0e-40 168.3 216 55.1
Duzib187G1156 Durio zibethinus HOM05D003644 ORTHO05D004305 1.3e-39 167.2 212 53.3
Manes.16G112500 Manihot esculenta HOM05D003644 ORTHO05D004305 1.7e-39 166.8 207 53.1
Potri.018G084100 Populus trichocarpa HOM05D003644 ORTHO05D004305 1.9e-38 163.3 210 48.1
Duzib150G1566 Durio zibethinus HOM05D003644 ORTHO05D004305 1.3e-37 160.6 209 50.7
Peaxi162Scf00231g00061 Petunia axillaris HOM05D003644 ORTHO05D004305 1.6e-37 160.2 209 54.1
QL02p044635 Quercus lobata HOM05D003644 ORTHO05D004305 3.6e-37 159.1 213 52.6
PGSC0003DMG400000374 Solanum tuberosum HOM05D003644 ORTHO05D004305 3.6e-37 159.1 210 54.3
Cpa.g.sc23.57 Carica papaya HOM05D003644 ORTHO05D004305 8.1e-37 157.9 208 51.4
Gorai.010G073900 Gossypium raimondii HOM05D003644 ORTHO05D004305 8.1e-37 157.9 208 51.0
Haze_25785 Corylus avellana HOM05D003644 ORTHO05D004305 1.1e-36 157.5 209 48.8
THA.LOC104814562 Tarenaya hassleriana HOM05D003644 ORTHO05D004305 1.1e-36 157.5 211 52.1
Manes.03G024200 Manihot esculenta HOM05D003644 ORTHO05D004305 1.4e-36 157.1 210 50.0
Sopen12g003210 Solanum pennellii HOM05D003644 ORTHO05D004305 2.4e-36 156.4 210 53.8
Duzib168G0231 Durio zibethinus HOM05D003644 ORTHO05D004305 1.2e-35 154.1 213 51.6
CiPaw.03G227900 Carya illinoinensis HOM05D003644 ORTHO05D004305 2.0e-35 153.3 214 50.9
Prupe.7G225200 Prunus persica HOM05D003644 ORTHO05D004305 2.6e-35 152.9 214 53.3
Gohir.D06G063400 Gossypium hirsutum HOM05D003644 ORTHO05D004305 4.4e-35 152.1 205 49.8
Oeu002262.2 Olea europaea HOM05D003644 ORTHO05D004305 4.4e-35 152.1 143 62.9
Dinv41640 Davidia involucrata HOM05D003644 ORTHO05D004305 7.6e-35 151.4 163 55.8
VMungo0251G1747 Vigna mungo HOM05D003644 ORTHO05D004305 7.6e-35 151.4 210 49.5
Glyma.09G193400 Glycine max HOM05D003644 ORTHO05D004305 1.7e-34 150.2 212 49.5
TAR624G1421 Trochodendron aralioides HOM05D003644 ORTHO05D004305 2.2e-34 149.8 205 51.7
CANSAT56G0200 Cannabis sativa HOM05D003644 ORTHO05D004305 6.4e-34 148.3 222 48.6
Sabra18G0072500 Salix brachista HOM05D003644 ORTHO05D004305 1.1e-33 147.5 233 42.5
MBI04_g14930_MAGBIO Magnolia biondii HOM05D003644 ORTHO05D004305 1.4e-33 147.1 209 46.4
Sed0019018 Sechium edule HOM05D003644 ORTHO05D004305 1.9e-33 146.7 211 47.4
Glyma.05G229100 Glycine max HOM05D003644 ORTHO05D004305 2.4e-33 146.4 208 51.0
TAR636G2793 Trochodendron aralioides HOM05D003644 ORTHO05D004305 3.2e-33 146.0 209 50.7
Gohir.A06G064800 Gossypium hirsutum HOM05D003644 ORTHO05D004305 1.2e-32 144.1 208 48.1
CAN.G1774.6 Capsicum annuum HOM05D003644 ORTHO05D004305 1.6e-32 143.7 172 54.1
Migut.K00491 Erythranthe guttata HOM05D003644 ORTHO05D004305 1.6e-32 143.7 208 52.4
Potri.006G161100 Populus trichocarpa HOM05D003644 ORTHO05D004305 1.6e-32 143.7 211 46.0
DCAR_012057 Daucus carota HOM05D003644 ORTHO05D004305 2.7e-32 142.9 215 48.4
TWI34G1832 Tripterygium wilfordii HOM05D003644 ORTHO05D004305 1.0e-31 141.0 218 51.8
Phvul.002G311400 Phaseolus vulgaris HOM05D003644 ORTHO05D004305 1.7e-31 140.2 210 48.1
MD02G1057600 Malus domestica HOM05D003644 ORTHO05D004305 2.3e-31 139.8 215 52.1
Atru.chr7.1390 Acer truncatum HOM05D003644 ORTHO05D004305 8.7e-31 137.9 214 50.5
Glyma.08G036100 Glycine max HOM05D003644 ORTHO05D004305 1.1e-30 137.5 206 48.5
Gorai.001G007300 Gossypium raimondii HOM05D003644 ORTHO05D004305 1.9e-30 136.7 210 48.6
Lj2g0017641 Lotus japonicus HOM05D003644 ORTHO05D004305 1.9e-30 136.7 209 46.4
Cc06_g10070 Coffea canephora HOM05D003644 ORTHO05D004305 2.5e-30 136.3 211 49.3
arahy.Tifrunner.gnm1.ann1.TDG8V6 Arachis hypogaea HOM05D003644 ORTHO05D004305 3.3e-30 136.0 217 48.4
Phvul.004G168350 Phaseolus vulgaris HOM05D003644 ORTHO05D004305 1.3e-29 134.0 206 50.0
Psat1g044920 Pisum sativum HOM05D003644 ORTHO05D004305 1.3e-29 134.0 207 47.8
TPR.G34913 Trifolium pratense HOM05D003644 ORTHO05D004305 2.8e-29 132.9 219 45.7
Gohir.D05G026700 Gossypium hirsutum HOM05D003644 ORTHO05D004305 3.6e-29 132.5 210 51.0
Gorai.009G026800 Gossypium raimondii HOM05D003644 ORTHO05D004305 4.8e-29 132.1 218 50.0
MD15G1192000 Malus domestica HOM05D003644 ORTHO05D004305 6.2e-29 131.7 213 50.2
Medtr6g088280 Medicago truncatula HOM05D003644 ORTHO05D004305 1.4e-28 130.6 208 48.6
THA.LOC104804017 Tarenaya hassleriana HOM05D003644 ORTHO05D004305 1.4e-28 130.6 168 47.0
VMungo0464G0020 Vigna mungo HOM05D003644 ORTHO05D004305 6.9e-28 128.3 205 47.8
Gohir.A05G025200 Gossypium hirsutum HOM05D003644 ORTHO05D004305 9.0e-28 127.9 210 50.5
arahy.Tifrunner.gnm1.ann1.XM0XDL Arachis hypogaea HOM05D003644 ORTHO05D004305 1.2e-27 127.5 219 49.8
Gohir.D07G007600 Gossypium hirsutum HOM05D003644 ORTHO05D004305 1.5e-27 127.1 210 47.1
FAN19G0617 Fragaria x ananassa HOM05D003644 ORTHO05D004305 2.6e-27 126.3 217 52.1
MELO3C004570.2 Cucumis melo HOM05D003644 ORTHO05D004305 3.4e-27 125.9 212 46.7
FvH4_1g05660 Fragaria vesca HOM05D003644 ORTHO05D004305 3.4e-27 125.9 217 52.1
Nitab4.5_0014820g0010 Nicotiana tabacum HOM05D003644 ORTHO05D004305 4.5e-27 125.6 151 52.3
PGSC0003DMG400003139 Solanum tuberosum HOM05D003644 ORTHO05D004305 9.9e-27 124.4 208 44.2
ClCG11G002330 Citrullus lanatus HOM05D003644 ORTHO05D004305 1.7e-26 123.6 214 47.2
FAN26G0903 Fragaria x ananassa HOM05D003644 ORTHO05D004305 1.7e-26 123.6 217 51.6
FAN26G3023 Fragaria x ananassa HOM05D003644 ORTHO05D004305 1.7e-26 123.6 217 51.6
Gohir.A07G004600 Gossypium hirsutum HOM05D003644 ORTHO05D004305 2.9e-26 122.9 199 46.7
TWI32G0193 Tripterygium wilfordii HOM05D003644 ORTHO05D004305 3.8e-26 122.5 212 49.5
Nn2g11654 Nelumbo nucifera HOM05D003644 ORTHO05D004305 4.9e-26 122.1 213 43.7
FAN28G1311 Fragaria x ananassa HOM05D003644 ORTHO05D004305 1.1e-25 120.9 228 49.1
Glyma.01G145600 Glycine max HOM05D003644 ORTHO05D004305 1.9e-25 120.2 213 47.4
CsaV3_2G002110 Cucumis sativus L. HOM05D003644 ORTHO05D004305 5.4e-25 118.6 218 42.7
Thhalv10002311m.g Eutrema salsugineum HOM05D003644 ORTHO05D004305 7.1e-25 118.2 207 44.4
PSO782G2161 Papaver somniferum HOM05D003644 ORTHO05D004305 9.3e-25 117.9 216 46.3
PSO566G0277 Papaver somniferum HOM05D003644 ORTHO05D004305 2.1e-24 116.7 216 46.3
AT4G28840 Arabidopsis thaliana HOM05D003644 ORTHO05D004305 2.7e-24 116.3 207 44.9
BcaC07g41224 Brassica carinata HOM05D003644 ORTHO05D004305 3.5e-24 115.9 204 41.7
C08p42300 Brassica napus HOM05D003644 ORTHO05D004305 4.6e-24 115.5 204 41.7
BolC8t51790H Brassica oleracea HOM05D003644 ORTHO05D004305 4.6e-24 115.5 204 41.7
ECA234G2378 Erigeron canadensis HOM05D003644 ORTHO05D004305 4.6e-24 115.5 211 42.2
A09p59020 Brassica napus HOM05D003644 ORTHO05D004305 7.9e-24 114.8 204 41.2
BraA09t41288Z Brassica rapa HOM05D003644 ORTHO05D004305 7.9e-24 114.8 204 41.2
ClCG06G008860 Citrullus lanatus HOM05D003644 ORTHO05D004305 1.0e-23 114.4 212 43.9
PGR142G1369 Punica granatum HOM05D003644 ORTHO05D004305 1.0e-23 114.4 222 43.2
Lalb_Chr05g0223051 Lupinus albus HOM05D003644 ORTHO05D004305 2.3e-23 113.2 170 51.2
Nn3g18137 Nelumbo nucifera HOM05D003644 ORTHO05D004305 2.3e-23 113.2 212 42.0
Lsat_1_v5_gn_8_96040 Lactuca sativa HOM05D003644 ORTHO05D004305 3.0e-23 112.8 166 45.2
Sp3g33380 Schrenkiella parvula HOM05D003644 ORTHO05D004305 6.7e-23 111.7 209 43.5
arahy.Tifrunner.gnm1.ann1.R9ZCFD Arachis hypogaea HOM05D003644 ORTHO05D004305 1.9e-22 110.2 185 49.7
arahy.Tifrunner.gnm1.ann1.X7P2RE Arachis hypogaea HOM05D003644 ORTHO05D004305 1.9e-22 110.2 154 50.6
FAN23G2152 Fragaria x ananassa HOM05D003644 ORTHO05D004305 3.3e-22 109.4 228 46.9
AUR62010940 Chenopodium quinoa HOM05D003644 ORTHO05D004305 4.3e-22 109.0 213 41.8
Sed0028016 Sechium edule HOM05D003644 ORTHO05D004305 4.3e-22 109.0 211 41.7
Sopen07g007520 Solanum pennellii HOM05D003644 ORTHO05D004305 4.3e-22 109.0 207 44.0
CsaV3_1G021830 Cucumis sativus L. HOM05D003644 ORTHO05D004305 5.6e-22 108.6 210 45.7
Lalb_Chr22g0352641 Lupinus albus HOM05D003644 ORTHO05D004305 7.4e-22 108.2 216 46.3
Carub.0007s1180 Capsella rubella HOM05D003644 ORTHO05D004305 2.8e-21 106.3 213 44.1
COL.COLO4_34805 Corchorus olitorius HOM05D003644 ORTHO05D004305 4.8e-21 105.5 211 44.1
RcHm_v2.0_Chr2g0091291 Rosa chinensis HOM05D003644 ORTHO05D004305 4.8e-21 105.5 174 51.7
Solyc12g007240.3 Solanum lycopersicum HOM05D003644 ORTHO05D004305 6.2e-21 105.1 148 46.6
Sed0013314 Sechium edule HOM05D003644 ORTHO05D004305 1.1e-20 104.4 207 43.5
Hund09225 Selenicereus undatus HOM05D003644 ORTHO05D004305 1.1e-20 104.4 219 45.2
MELO3C024703.2 Cucumis melo HOM05D003644 ORTHO05D004305 1.8e-20 103.6 210 44.3
AL3G48010 Arabidopsis lyrata HOM05D003644 ORTHO05D004305 2.4e-20 103.2 203 42.9
Actinidia09436 Actinidia chinensis HOM05D003644 ORTHO05D004305 1.2e-19 100.9 216 42.1
Aa31LG2G21540 Aethionema arabicum HOM05D003644 ORTHO05D004305 1.2e-19 100.9 134 44.0
Actinidia20403 Actinidia chinensis HOM05D003644 ORTHO05D004305 2.6e-19 99.8 203 43.3
Actinidia32668 Actinidia chinensis HOM05D003644 ORTHO05D004305 2.6e-19 99.8 149 43.0
EL10Ac8g18428 Beta vulgaris HOM05D003644 ORTHO05D004305 4.5e-19 99.0 171 45.0
HanXRQChr12g0358181 Helianthus annuus HOM05D003644 ORTHO05D004305 1.3e-18 97.4 205 38.0
Sp7g26840 Schrenkiella parvula HOM05D003644 ORTHO05D004305 1.3e-18 97.4 172 44.8
BcaC06g32601 Brassica carinata HOM05D003644 ORTHO05D004305 6.5e-18 95.1 206 41.7
Lalb_Chr16g0388081 Lupinus albus HOM05D003644 ORTHO05D004305 6.5e-18 95.1 117 55.6
BcaB08g34898 Brassica carinata HOM05D003644 ORTHO05D004305 1.4e-17 94.0 182 37.9
A01p09070 Brassica napus HOM05D003644 ORTHO05D004305 1.4e-17 94.0 208 38.9
C01p10620 Brassica napus HOM05D003644 ORTHO05D004305 1.4e-17 94.0 208 38.9
BraA01t00855Z Brassica rapa HOM05D003644 ORTHO05D004305 1.4e-17 94.0 208 38.9
CARHR110580 Cardamine hirsuta HOM05D003644 ORTHO05D004305 1.9e-17 93.6 203 38.9
BcaC07g41225 Brassica carinata HOM05D003644 ORTHO05D004305 2.5e-17 93.2 181 37.6
A03p58450 Brassica napus HOM05D003644 ORTHO05D004305 2.5e-17 93.2 211 42.2
BcaNung01359 Brassica carinata HOM05D003644 ORTHO05D004305 3.2e-17 92.8 194 42.3
BolC7t46126H Brassica oleracea HOM05D003644 ORTHO05D004305 3.2e-17 92.8 211 42.2
DCAR_010477 Daucus carota HOM05D003644 ORTHO05D004305 4.2e-17 92.4 215 35.3
Aqoxy7G01525 Aquilegia oxysepala HOM05D003644 ORTHO05D004305 7.1e-17 91.7 206 42.2
C07p56470 Brassica napus HOM05D003644 ORTHO05D004305 9.3e-17 91.3 207 40.6
BolC1t01024H Brassica oleracea HOM05D003644 ORTHO05D004305 9.3e-17 91.3 208 38.5
Nitab4.5_0001004g0030 Nicotiana tabacum HOM05D003644 ORTHO05D004305 1.2e-16 90.9 122 52.5
Sc18g0001380 Simmondsia chinensis HOM05D003644 ORTHO05D004305 1.2e-16 90.9 203 36.0
BcaNung04091 Brassica carinata HOM05D003644 ORTHO05D004305 2.1e-16 90.1 182 39.0
HanXRQChr14g0449921 Helianthus annuus HOM05D003644 ORTHO05D004305 2.1e-16 90.1 202 37.6
Oeu018442.1 Olea europaea HOM05D003644 ORTHO05D004305 2.1e-16 90.1 119 52.9
Hund09226 Selenicereus undatus HOM05D003644 ORTHO05D004305 2.7e-16 89.7 191 39.3
BcaC09g51666 Brassica carinata HOM05D003644 ORTHO05D004305 7.9e-16 88.2 191 40.3
Hma1.2p1_0945F.1_g240090 Hydrangea macrophylla HOM05D003644 ORTHO05D004305 1.0e-15 87.8 209 43.1
PGR102G0050 Punica granatum HOM05D003644 ORTHO05D004305 1.0e-15 87.8 180 43.9
Aa31LG8G17030 Aethionema arabicum HOM05D003644 ORTHO05D004305 2.3e-15 86.7 163 42.3
BolC7t40541H Brassica oleracea HOM05D003644 ORTHO05D004305 5.1e-15 85.5 212 37.7
COL.COLO4_17464 Corchorus olitorius HOM05D003644 ORTHO05D004305 6.7e-15 85.1 158 41.1
Carub.0003s3436 Capsella rubella HOM05D003644 ORTHO05D004305 8.7e-15 84.7 190 38.4
C09p15050 Brassica napus HOM05D003644 ORTHO05D004305 1.5e-14 84.0 163 41.1
Sc08g0007690 Simmondsia chinensis HOM05D003644 ORTHO05D004305 1.9e-14 83.6 208 41.3
TPR.G23503 Trifolium pratense HOM05D003644 ORTHO05D004305 1.9e-14 83.6 205 42.9
Lsat_1_v5_gn_5_147641 Lactuca sativa HOM05D003644 ORTHO05D004305 3.3e-14 82.8 135 53.3
Thhalv10026355m.g Eutrema salsugineum HOM05D003644 ORTHO05D004305 9.6e-14 81.3 203 35.5
A07p00580 Brassica napus HOM05D003644 ORTHO05D004305 2.8e-13 79.7 210 36.7
A09p12690 Brassica napus HOM05D003644 ORTHO05D004305 3.7e-13 79.3 165 38.2
BcaC04g22808 Brassica carinata HOM05D003644 ORTHO05D004305 1.4e-12 77.4 161 37.3
BolC9t54408H Brassica oleracea HOM05D003644 ORTHO05D004305 1.4e-12 77.4 161 37.3
Zm00001eb156860 Zea mays HOM05D003644 ORTHO05D004305 1.8e-12 77.0 172 37.8
BcaC06g36690 Brassica carinata HOM05D003644 ORTHO05D004305 3.1e-12 76.3 115 45.2
AT2G20080 Arabidopsis thaliana HOM05D003644 ORTHO05D004305 6.9e-12 75.1 202 33.7
Hund26238 Selenicereus undatus HOM05D003644 ORTHO05D004305 9.0e-12 74.7 206 35.4
unitig_578.g15927 Utricularia gibba HOM05D003644 ORTHO05D004305 1.2e-11 74.3 101 44.6
BcaB03g16807 Brassica carinata HOM05D003644 ORTHO05D004305 1.5e-11 73.9 203 37.4
BraA07t27854Z Brassica rapa HOM05D003644 ORTHO05D004305 2.0e-11 73.6 119 45.4
C07p01040 Brassica napus HOM05D003644 ORTHO05D004305 4.5e-11 72.4 217 35.5
Zm00001eb360290 Zea mays HOM05D003644 ORTHO05D004305 2.2e-10 70.1 175 35.4
Psat7g014640 Pisum sativum HOM05D003644 ORTHO05D004305 3.8e-10 69.3 163 40.5
Eucgr.C01280 Eucalyptus grandis HOM05D003644 ORTHO05D004305 5.0e-10 68.9 211 35.5
Nitab4.5_0002431g0010 Nicotiana tabacum HOM05D003644 ORTHO05D004305 8.4e-10 68.2 91 46.2
Zm00001eb343410 Zea mays HOM05D003644 ORTHO05D004305 2.5e-09 66.6 186 36.0
BraA09t36915Z Brassica rapa HOM05D003644 ORTHO05D004305 3.2e-09 66.2 83 45.8
Medtr8g102890 Medicago truncatula HOM05D003644 ORTHO05D004305 7.1e-09 65.1 98 45.9
Solyc07g018370.3 Solanum lycopersicum HOM05D003644 ORTHO05D004305 1.6e-08 63.9 113 40.7
HPP92_019983 Vanilla planifolia HOM05D003644 ORTHO05D004305 2.7e-08 63.2 193 35.2
Ah.09g230900 Amaranthus hybridus HOM05D003644 ORTHO05D004305 7.9e-08 61.6 197 34.5
BcaB03g16801 Brassica carinata HOM05D003644 ORTHO05D004305 1.0e-07 61.2 43 67.4
Sc08g0007700 Simmondsia chinensis HOM05D003644 ORTHO05D004305 1.3e-07 60.8 163 31.9
AL7G23640 Arabidopsis lyrata HOM05D003644 ORTHO05D004305 1.8e-07 60.5 114 41.2
CARHR236630 Cardamine hirsuta HOM05D003644 ORTHO05D004305 5.7e-06 55.5 65 58.5
Os01g0676900 Oryza sativa ssp. japonica HOM05D003644 ORTHO05D004305 5.7e-06 55.5 204 31.4


User provided reference genes

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