Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G0008 Salvia bowleyana HOM05D003621 ORTHO05D004259 3.1e-47 191.4 94 100.0
SalBow6G0300 Salvia bowleyana HOM05D003621 ORTHO05D004259 9.9e-38 159.8 82 93.9
SalBow6G3329 Salvia bowleyana HOM05D003621 ORTHO05D004259 4.2e-36 154.5 82 92.7
SalBow6G5466 Salvia bowleyana HOM05D003621 ORTHO05D000122 7.9e-35 150.2 82 91.5
SalBow6G6039 Salvia bowleyana HOM05D003621 ORTHO05D004259 6.7e-34 147.1 83 89.2
SalBow6G4876 Salvia bowleyana HOM05D003621 ORTHO05D004259 4.8e-32 141.0 73 91.8
Migut.J01117 Erythranthe guttata HOM05D003621 ORTHO05D004259 1.3e-29 132.9 82 78.0
SalBow6G2522 Salvia bowleyana HOM05D003621 ORTHO05D004259 3.8e-29 131.3 82 80.5
Migut.J01104 Erythranthe guttata HOM05D003621 ORTHO05D004259 6.4e-29 130.6 82 74.4
Migut.G00929 Erythranthe guttata HOM05D003621 ORTHO05D004259 8.4e-29 130.2 82 70.7
Migut.J01103 Erythranthe guttata HOM05D003621 ORTHO05D004259 1.1e-28 129.8 82 75.6
SalBow6G1987 Salvia bowleyana HOM05D003621 ORTHO05D004259 1.4e-28 129.4 82 80.5
Migut.J01116 Erythranthe guttata HOM05D003621 ORTHO05D004259 4.6e-27 124.4 82 72.0
Migut.J01147 Erythranthe guttata HOM05D003621 ORTHO05D004259 6.0e-27 124.0 82 70.7
Migut.J01112 Erythranthe guttata HOM05D003621 ORTHO05D004259 7.9e-27 123.6 82 69.5
SGA_v2.0_scaffold10G05155 Striga asiatica HOM05D003621 ORTHO05D004259 7.9e-27 123.6 82 70.7
Migut.J01110 Erythranthe guttata HOM05D003621 ORTHO05D004259 1.3e-26 122.9 82 68.3
Migut.J01113 Erythranthe guttata HOM05D003621 ORTHO05D004259 1.8e-26 122.5 82 68.3
Migut.J01118 Erythranthe guttata HOM05D003621 ORTHO05D004259 5.1e-26 120.9 82 69.5
Migut.J01119 Erythranthe guttata HOM05D003621 ORTHO05D004259 9.6e-25 116.7 82 65.9
Hma1.2p1_0018F.1_g013590 Hydrangea macrophylla HOM05D003621 ORTHO05D004259 1.5e-22 109.4 82 64.6
Oeu064901.1 Olea europaea HOM05D003621 ORTHO05D004259 2.0e-22 109.0 82 61.0
Dinv41608 Davidia involucrata HOM05D003621 ORTHO05D004259 7.6e-22 107.1 82 63.4
Actinidia09421 Actinidia chinensis HOM05D003621 ORTHO05D004259 1.3e-21 106.3 82 65.9
SalBow6G3888 Salvia bowleyana HOM05D003621 ORTHO05D004259 1.7e-21 105.9 63 82.5
Oeu044981.1 Olea europaea HOM05D003621 ORTHO05D004259 2.2e-21 105.5 82 63.4
CSS0004511 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 2.9e-21 105.1 82 64.6
HPP92_005264 Vanilla planifolia HOM05D003621 ORTHO05D004259 3.8e-21 104.8 82 59.8
Migut.J01155 Erythranthe guttata HOM05D003621 ORTHO05D004259 4.9e-21 104.4 83 65.1
Migut.J01111 Erythranthe guttata HOM05D003621 ORTHO05D004259 6.5e-21 104.0 80 58.8
Thecc.09G109600 Theobroma cacao HOM05D003621 ORTHO05D004259 6.5e-21 104.0 82 61.0
MSTRG.19588 Avicennia marina HOM05D003621 ORTHO05D004259 8.4e-21 103.6 82 62.2
Duzib168G1477 Durio zibethinus HOM05D003621 ORTHO05D004259 8.4e-21 103.6 82 61.0
Gohir.A07G006000 Gossypium hirsutum HOM05D003621 ORTHO05D004259 8.4e-21 103.6 82 62.2
Lj7A651T32 Lonicera japonica HOM05D003621 ORTHO05D004259 8.4e-21 103.6 82 62.2
Potri.006G158600 Populus trichocarpa HOM05D003621 ORTHO05D004259 8.4e-21 103.6 82 61.0
unitig_22.g6628 Utricularia gibba HOM05D003621 ORTHO05D004259 8.4e-21 103.6 82 61.0
SGA_v2.0_scaffold30G12371 Striga asiatica HOM05D003621 ORTHO05D004259 1.1e-20 103.2 82 59.8
Cpa.g.sc23.101 Carica papaya HOM05D003621 ORTHO05D004259 1.4e-20 102.8 82 59.8
Ciclev10008142m.g Citrus clementina HOM05D003621 ORTHO05D004259 1.4e-20 102.8 82 58.5
COL.COLO4_34873 Corchorus olitorius HOM05D003621 ORTHO05D004259 1.9e-20 102.4 82 59.8
Aa31sc99G150 Aethionema arabicum HOM05D003621 ORTHO05D004259 2.5e-20 102.1 82 58.5
Gohir.D07G006000 Gossypium hirsutum HOM05D003621 ORTHO05D004259 2.5e-20 102.1 82 61.0
Gorai.001G005600 Gossypium raimondii HOM05D003621 ORTHO05D004259 2.5e-20 102.1 82 61.0
Nitab4.5_0004562g0010 Nicotiana tabacum HOM05D003621 ORTHO05D004259 2.5e-20 102.1 82 59.8
Gohir.D13G202000 Gossypium hirsutum HOM05D003621 ORTHO05D004259 3.2e-20 101.7 82 58.5
Gorai.013G230900 Gossypium raimondii HOM05D003621 ORTHO05D004259 3.2e-20 101.7 82 58.5
Peaxi162Scf00546g00023 Petunia axillaris HOM05D003621 ORTHO05D004259 3.2e-20 101.7 82 61.0
Sopen07g012210 Solanum pennellii HOM05D003621 ORTHO05D004259 3.2e-20 101.7 82 59.8
Cc06_g09720 Coffea canephora HOM05D003621 ORTHO05D004259 4.2e-20 101.3 82 59.8
Eucgr.C01036 Eucalyptus grandis HOM05D003621 ORTHO05D004259 4.2e-20 101.3 82 58.5
HanXRQChr09g0239661 Helianthus annuus HOM05D003621 ORTHO05D004259 4.2e-20 101.3 82 61.0
Sabra18G0068200 Salix brachista HOM05D003621 ORTHO05D004259 4.2e-20 101.3 82 57.3
GSVIVG01015385001 Vitis vinifera HOM05D003621 ORTHO05D004259 4.2e-20 101.3 82 59.8
Atru.chr7.1358 Acer truncatum HOM05D003621 ORTHO05D004259 5.5e-20 100.9 82 59.8
Nitab4.5_0000114g0080 Nicotiana tabacum HOM05D003621 ORTHO05D004259 5.5e-20 100.9 82 59.8
CDE08G0484 Ceratophyllum demersum HOM05D003621 ORTHO05D004259 9.3e-20 100.1 82 52.4
Peaxi162Scf00231g00033 Petunia axillaris HOM05D003621 ORTHO05D004259 9.3e-20 100.1 82 61.0
BcaB06g26656 Brassica carinata HOM05D003621 ORTHO05D004259 1.2e-19 99.8 82 57.3
BcaC06g35719 Brassica carinata HOM05D003621 ORTHO05D004259 1.2e-19 99.8 82 57.3
A07p07780 Brassica napus HOM05D003621 ORTHO05D004259 1.2e-19 99.8 82 57.3
C07p11700 Brassica napus HOM05D003621 ORTHO05D004259 1.2e-19 99.8 82 57.3
BolC7t41643H Brassica oleracea HOM05D003621 ORTHO05D004259 1.2e-19 99.8 82 57.3
BraA07t28569Z Brassica rapa HOM05D003621 ORTHO05D004259 1.2e-19 99.8 82 57.3
Thhalv10002506m.g Eutrema salsugineum HOM05D003621 ORTHO05D004259 1.2e-19 99.8 82 57.3
Nn8g39169 Nelumbo nucifera HOM05D003621 ORTHO05D004259 1.2e-19 99.8 82 61.0
Potri.018G081000 Populus trichocarpa HOM05D003621 ORTHO05D004259 1.2e-19 99.8 82 57.3
PGR142G3711 Punica granatum HOM05D003621 ORTHO05D004259 1.2e-19 99.8 82 61.0
Sp3g22320 Schrenkiella parvula HOM05D003621 ORTHO05D004259 1.2e-19 99.8 82 57.3
THA.LOC104808764 Tarenaya hassleriana HOM05D003621 ORTHO05D004259 1.2e-19 99.8 82 57.3
Aqoxy7G01646 Aquilegia oxysepala HOM05D003621 ORTHO05D004259 1.6e-19 99.4 82 58.5
Cfa021562 Carpinus fangiana HOM05D003621 ORTHO05D004259 1.6e-19 99.4 82 58.5
Dinv36637 Davidia involucrata HOM05D003621 ORTHO05D004259 1.6e-19 99.4 82 61.0
Gohir.A13G196700 Gossypium hirsutum HOM05D003621 ORTHO05D004259 1.6e-19 99.4 82 57.3
Duzib187G1605 Durio zibethinus HOM05D003621 ORTHO05D004259 2.1e-19 99.0 82 58.5
FAN26G0011 Fragaria x ananassa HOM05D003621 ORTHO05D004259 2.1e-19 99.0 82 59.8
Hund09208 Selenicereus undatus HOM05D003621 ORTHO05D004259 2.1e-19 99.0 82 56.1
Ah.14g082090 Amaranthus hybridus HOM05D003621 ORTHO05D004259 2.7e-19 98.6 82 56.1
CAN.G1529.8 Capsicum annuum HOM05D003621 ORTHO05D004259 2.7e-19 98.6 82 58.5
Manes.16G115500 Manihot esculenta HOM05D003621 ORTHO05D004259 2.7e-19 98.6 82 54.9
Nitab4.5_0002904g0090 Nicotiana tabacum HOM05D003621 ORTHO05D004259 2.7e-19 98.6 82 58.5
ATR0315G144 Amborella trichopoda HOM05D003621 ORTHO05D004259 3.5e-19 98.2 82 59.8
Haze_25724 Corylus avellana HOM05D003621 ORTHO05D004259 3.5e-19 98.2 82 58.5
Carub.0003s2492 Capsella rubella HOM05D003621 ORTHO05D004259 4.6e-19 97.8 82 56.1
DCAR_028707 Daucus carota HOM05D003621 ORTHO05D004259 4.6e-19 97.8 82 57.3
FAN23G2072 Fragaria x ananassa HOM05D003621 ORTHO05D004259 4.6e-19 97.8 82 59.8
FAN28G1412 Fragaria x ananassa HOM05D003621 ORTHO05D004259 4.6e-19 97.8 82 59.8
PSO782G0111 Papaver somniferum HOM05D003621 ORTHO05D004259 4.6e-19 97.8 82 58.5
QL02p085200 Quercus lobata HOM05D003621 ORTHO05D004259 4.6e-19 97.8 82 57.3
RcHm_v2.0_Chr2g0090311 Rosa chinensis HOM05D003621 ORTHO05D004259 4.6e-19 97.8 82 58.5
TWI63G0694 Tripterygium wilfordii HOM05D003621 ORTHO05D004259 4.6e-19 97.8 82 56.1
TAR624G1386 Trochodendron aralioides HOM05D003621 ORTHO05D004259 4.6e-19 97.8 82 59.8
vmacro06217 Vaccinium macrocarpon HOM05D003621 ORTHO05D004259 4.6e-19 97.8 82 58.5
Aa31sc29G80 Aethionema arabicum HOM05D003621 ORTHO05D004259 6.0e-19 97.4 82 53.7
CSS0027044 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 6.0e-19 97.4 82 59.8
CSS0049361 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 6.0e-19 97.4 82 59.8
Ca_03977_v3 Cicer arietinum L. HOM05D003621 ORTHO05D004259 6.0e-19 97.4 82 56.1
FvH4_1g04710 Fragaria vesca HOM05D003621 ORTHO05D004259 6.0e-19 97.4 82 58.5
FAN19G2426 Fragaria x ananassa HOM05D003621 ORTHO05D004259 6.0e-19 97.4 82 58.5
Nitab4.5_0005947g0020 Nicotiana tabacum HOM05D003621 ORTHO05D004259 6.0e-19 97.4 82 58.5
Phvul.004G163800 Phaseolus vulgaris HOM05D003621 ORTHO05D004259 6.0e-19 97.4 82 57.3
Solyc07g023990.3 Solanum lycopersicum HOM05D003621 ORTHO05D004259 6.0e-19 97.4 82 57.3
Sopen12g003080 Solanum pennellii HOM05D003621 ORTHO05D004259 6.0e-19 97.4 82 58.5
CARHR100670 Cardamine hirsuta HOM05D003621 ORTHO05D004259 7.9e-19 97.1 82 56.1
Haze_25731 Corylus avellana HOM05D003621 ORTHO05D004259 7.9e-19 97.1 82 58.5
Lj2g0018985 Lotus japonicus HOM05D003621 ORTHO05D004259 7.9e-19 97.1 82 57.3
Os02g0266300 Oryza sativa ssp. japonica HOM05D003621 ORTHO05D004259 7.9e-19 97.1 82 57.3
RhsimUnG0196500 Rhododendron simsii HOM05D003621 ORTHO05D004259 7.9e-19 97.1 82 58.5
Solyc12g007100.2 Solanum lycopersicum HOM05D003621 ORTHO05D004259 7.9e-19 97.1 82 58.5
PGSC0003DMG400000311 Solanum tuberosum HOM05D003621 ORTHO05D004259 7.9e-19 97.1 82 58.5
PGSC0003DMG400030220 Solanum tuberosum HOM05D003621 ORTHO05D004259 7.9e-19 97.1 82 57.3
CiPaw.03G231600 Carya illinoinensis HOM05D003621 ORTHO05D004259 1.0e-18 96.7 82 57.3
PSO832G1684 Papaver somniferum HOM05D003621 ORTHO05D004259 1.0e-18 96.7 82 58.5
CDE02G2554 Ceratophyllum demersum HOM05D003621 ORTHO05D004259 1.3e-18 96.3 82 50.0
HanXRQChr10g0318561 Helianthus annuus HOM05D003621 ORTHO05D004259 1.3e-18 96.3 81 56.8
HanXRQChr16g0522441 Helianthus annuus HOM05D003621 ORTHO05D004259 1.3e-18 96.3 81 56.8
Nn2g11728 Nelumbo nucifera HOM05D003621 ORTHO05D004259 1.3e-18 96.3 82 57.3
Prupe.7G232000 Prunus persica HOM05D003621 ORTHO05D004259 1.8e-18 95.9 82 56.1
TAR636G2961 Trochodendron aralioides HOM05D003621 ORTHO05D004259 2.3e-18 95.5 82 59.8
AL3G40070 Arabidopsis lyrata HOM05D003621 ORTHO05D004259 3.0e-18 95.1 82 53.7
AT3G24530 Arabidopsis thaliana HOM05D003621 ORTHO05D004259 3.0e-18 95.1 82 53.7
AUR62021495 Chenopodium quinoa HOM05D003621 ORTHO05D004259 3.0e-18 95.1 82 54.9
SMO367G0606 Selaginella moellendorffii HOM05D003621 ORTHO05D004259 3.0e-18 95.1 82 54.9
Sc08g0007530 Simmondsia chinensis HOM05D003621 ORTHO05D004259 3.0e-18 95.1 82 56.1
TPR.G25311 Trifolium pratense HOM05D003621 ORTHO05D004259 3.0e-18 95.1 82 56.1
TWI34G1138 Tripterygium wilfordii HOM05D003621 ORTHO05D004259 3.0e-18 95.1 82 53.7
AUR62010986 Chenopodium quinoa HOM05D003621 ORTHO05D004259 3.9e-18 94.7 82 54.9
Medtr6g088470 Medicago truncatula HOM05D003621 ORTHO05D004259 3.9e-18 94.7 82 57.3
SalBow6G4774 Salvia bowleyana HOM05D003621 ORTHO05D004259 3.9e-18 94.7 84 64.3
Hund26199 Selenicereus undatus HOM05D003621 ORTHO05D004259 3.9e-18 94.7 82 53.7
MD15G1184200 Malus domestica HOM05D003621 ORTHO05D004259 5.1e-18 94.4 82 54.9
Manes.03G021400 Manihot esculenta HOM05D003621 ORTHO05D004259 5.1e-18 94.4 82 52.4
VMungo0464G0841 Vigna mungo HOM05D003621 ORTHO05D004259 5.1e-18 94.4 82 57.3
MELO3C006786.2 Cucumis melo HOM05D003621 ORTHO05D004259 6.7e-18 94.0 82 56.1
CsaV3_3G015870 Cucumis sativus L. HOM05D003621 ORTHO05D004259 6.7e-18 94.0 82 56.1
ECA240G2782 Erigeron canadensis HOM05D003621 ORTHO05D004259 1.1e-17 93.2 82 56.1
Zm00001eb204000 Zea mays HOM05D003621 ORTHO05D004259 1.1e-17 93.2 82 56.1
CiPaw.04G163500 Carya illinoinensis HOM05D003621 ORTHO05D004259 1.5e-17 92.8 82 54.9
Glyma.09G191100 Glycine max HOM05D003621 ORTHO05D004259 1.5e-17 92.8 82 53.7
Psat1g042960 Pisum sativum HOM05D003621 ORTHO05D004259 3.3e-17 91.7 82 54.9
MD02G1046000 Malus domestica HOM05D003621 ORTHO05D004259 4.3e-17 91.3 82 53.7
Sed0008991 Sechium edule HOM05D003621 ORTHO05D004259 4.3e-17 91.3 82 53.7
vmacro10501 Vaccinium macrocarpon HOM05D003621 ORTHO05D004259 4.3e-17 91.3 82 54.9
Sed0020967 Sechium edule HOM05D003621 ORTHO05D004259 5.7e-17 90.9 82 54.9
arahy.Tifrunner.gnm1.ann1.EYQI1F Arachis hypogaea HOM05D003621 ORTHO05D004259 7.4e-17 90.5 82 53.7
arahy.Tifrunner.gnm1.ann1.VSCA53 Arachis hypogaea HOM05D003621 ORTHO05D004259 7.4e-17 90.5 82 53.7
ClCG05G007150 Citrullus lanatus HOM05D003621 ORTHO05D004259 7.4e-17 90.5 82 53.7
Lsat_1_v5_gn_7_40780 Lactuca sativa HOM05D003621 ORTHO05D004259 9.7e-17 90.1 84 54.8
EL10Ac8g18488 Beta vulgaris HOM05D003621 ORTHO05D004259 1.3e-16 89.7 82 52.4
Glyma.07G085800 Glycine max HOM05D003621 ORTHO05D004259 1.3e-16 89.7 82 53.7
SEGI_35600 Sequoiadendron giganteum HOM05D003621 ORTHO05D004259 1.3e-16 89.7 82 51.2
Lalb_Chr24g0397591 Lupinus albus HOM05D003621 ORTHO05D004259 2.2e-16 89.0 82 52.4
Nn8g39165 Nelumbo nucifera HOM05D003621 ORTHO05D004259 2.8e-16 88.6 82 54.9
Lalb_Chr14g0371541 Lupinus albus HOM05D003621 ORTHO05D004259 8.2e-16 87.0 82 52.4
Cc00_g28820 Coffea canephora HOM05D003621 ORTHO05D004259 3.4e-14 81.6 82 53.7
SHI02763 Sapria himalayana HOM05D003621 ORTHO05D004259 2.2e-13 79.0 84 46.4
SGA_v2.0_scaffold137G35130 Striga asiatica HOM05D003621 ORTHO05D004259 8.5e-13 77.0 82 48.8
Aqoxy3G01597 Aquilegia oxysepala HOM05D003621 ORTHO05D004259 2.1e-11 72.4 82 46.3
Aqoxy7G01648 Aquilegia oxysepala HOM05D003621 ORTHO05D004259 6.1e-11 70.9 82 46.3
Hma1.2p1_0001F.1_g001560 Hydrangea macrophylla HOM05D003621 ORTHO05D004259 1.1e-09 66.6 84 38.1
Hma1.2p1_1455F.1_g284390 Hydrangea macrophylla HOM05D003621 ORTHO05D004259 1.3e-08 63.2 84 35.7
Nn8g39167 Nelumbo nucifera HOM05D003621 ORTHO05D004259 1.3e-08 63.2 79 49.4
Dinv30495 Davidia involucrata HOM05D003621 ORTHO05D004259 2.2e-08 62.4 81 37.0


User provided reference genes

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