Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow5G4654 Salvia bowleyana HOM05D006695 ORTHO05D008239 4.7e-126 454.5 226 100.0
SalBow5G4989 Salvia bowleyana HOM05D006695 ORTHO05D008239 4.7e-126 454.5 226 100.0
SGA_v2.0_scaffold89G27581 Striga asiatica HOM05D006695 ORTHO05D008239 1.7e-104 382.9 225 82.7
MSTRG.24766 Avicennia marina HOM05D006695 ORTHO05D008239 4.3e-103 378.3 227 82.4
Migut.N00136 Erythranthe guttata HOM05D006695 ORTHO05D008239 2.6e-100 369.0 227 79.3
Oeu044811.1 Olea europaea HOM05D006695 ORTHO05D008239 9.8e-100 367.1 227 80.2
Peaxi162Scf00095g00413 Petunia axillaris HOM05D006695 ORTHO05D008239 1.3e-96 356.7 222 77.5
Cc03_g02720 Coffea canephora HOM05D006695 ORTHO05D008239 3.0e-96 355.5 227 76.7
PGSC0003DMG400032106 Solanum tuberosum HOM05D006695 ORTHO05D008239 1.1e-95 353.6 227 75.8
Sopen01g032270 Solanum pennellii HOM05D006695 ORTHO05D008239 1.5e-95 353.2 227 75.8
GSVIVG01017849001 Vitis vinifera HOM05D006695 ORTHO05D008239 1.5e-95 353.2 212 80.2
DCAR_022857 Daucus carota HOM05D006695 ORTHO05D008239 2.5e-95 352.4 222 77.5
Hma1.2p1_0643F.1_g194500 Hydrangea macrophylla HOM05D006695 ORTHO05D008239 4.3e-95 351.7 213 81.7
Actinidia23450 Actinidia chinensis HOM05D006695 ORTHO05D008239 7.3e-95 350.9 216 77.8
MD13G1177300 Malus domestica HOM05D006695 ORTHO05D008239 7.3e-95 350.9 212 81.1
CAN.G889.4 Capsicum annuum HOM05D006695 ORTHO05D008239 9.5e-95 350.5 227 75.3
Solyc01g080470.3 Solanum lycopersicum HOM05D006695 ORTHO05D008239 1.6e-94 349.7 227 75.3
TAR362G0795 Trochodendron aralioides HOM05D006695 ORTHO05D008239 1.6e-94 349.7 212 80.2
CiPaw.01G156500 Carya illinoinensis HOM05D006695 ORTHO05D008239 2.8e-94 349.0 212 79.2
Nitab4.5_0000059g0220 Nicotiana tabacum HOM05D006695 ORTHO05D008239 3.6e-94 348.6 228 77.2
TWI09G1388 Tripterygium wilfordii HOM05D006695 ORTHO05D008239 3.6e-94 348.6 212 78.8
CSS0029139 Camellia sinensis var. sinensis HOM05D002837 ORTHO05D008239 4.7e-94 348.2 214 80.4
CANSAT78G2164 Cannabis sativa HOM05D006695 ORTHO05D008239 1.1e-93 347.1 213 79.3
RcHm_v2.0_Chr4g0420161 Rosa chinensis HOM05D006695 ORTHO05D008239 1.1e-93 347.1 212 80.2
Atru.chr4.2706 Acer truncatum HOM05D006695 ORTHO05D008239 1.8e-93 346.3 211 78.7
Manes.03G188400 Manihot esculenta HOM05D006695 ORTHO05D008239 1.8e-93 346.3 214 79.4
Prupe.1G146500 Prunus persica HOM05D006695 ORTHO05D008239 3.1e-93 345.5 212 79.2
QL06p006240 Quercus lobata HOM05D006695 ORTHO05D008239 4.0e-93 345.1 212 79.7
Lj3A806T51 Lonicera japonica HOM05D006695 ORTHO05D008239 6.8e-93 344.4 213 78.9
PSO832G0924 Papaver somniferum HOM05D006695 ORTHO05D008239 2.0e-92 342.8 216 75.5
VMungo1215G2645 Vigna mungo HOM05D006695 ORTHO05D008239 4.4e-92 341.7 224 74.6
FvH4_4g16710 Fragaria vesca HOM05D006695 ORTHO05D008239 9.9e-92 340.5 212 79.2
FAN22G2065 Fragaria x ananassa HOM05D006695 ORTHO05D008239 9.9e-92 340.5 209 78.9
Gohir.A10G105600 Gossypium hirsutum HOM05D006695 ORTHO05D008239 1.3e-91 340.1 212 77.8
PSO210G1829 Papaver somniferum HOM05D006695 ORTHO05D008239 1.3e-91 340.1 216 75.0
FAN07G1129 Fragaria x ananassa HOM05D006695 ORTHO05D008239 1.7e-91 339.7 212 78.8
Thecc.04G272900 Theobroma cacao HOM05D006695 ORTHO05D008239 2.2e-91 339.3 212 76.9
ECA233G4227 Erigeron canadensis HOM05D006695 ORTHO05D008239 2.9e-91 339.0 215 78.1
Gorai.011G181900 Gossypium raimondii HOM05D006695 ORTHO05D008239 3.7e-91 338.6 212 77.4
Potri.008G198200 Populus trichocarpa HOM05D006695 ORTHO05D008239 3.7e-91 338.6 211 77.7
Glyma.17G020700 Glycine max HOM05D006695 ORTHO05D008239 4.9e-91 338.2 213 76.5
Psat4g028960 Pisum sativum HOM05D006695 ORTHO05D008239 4.9e-91 338.2 213 75.6
FAN17G3101 Fragaria x ananassa HOM05D006695 ORTHO05D008239 6.4e-91 337.8 212 77.8
Lalb_Chr12g0196371 Lupinus albus HOM05D006695 ORTHO05D008239 8.3e-91 337.4 213 77.0
Phvul.003G098300 Phaseolus vulgaris HOM05D006695 ORTHO05D008239 8.3e-91 337.4 213 75.6
Gohir.D10G163000 Gossypium hirsutum HOM05D006695 ORTHO05D008239 1.1e-90 337.0 212 77.4
Aqoxy5G00568 Aquilegia oxysepala HOM05D006695 ORTHO05D008239 4.1e-90 335.1 215 75.8
Thhalv10026193m.g Eutrema salsugineum HOM05D006695 ORTHO05D008239 5.4e-90 334.7 214 76.6
Ciclev10006973m.g Citrus clementina HOM05D006695 ORTHO05D008239 9.2e-90 334.0 212 76.9
CsaV3_3G013940 Cucumis sativus L. HOM05D006695 ORTHO05D008239 9.2e-90 334.0 212 76.9
TPR.G28124 Trifolium pratense HOM05D006695 ORTHO05D008239 9.2e-90 334.0 212 74.5
Lsat_1_v5_gn_6_64520 Lactuca sativa HOM05D006695 ORTHO05D008239 1.6e-89 333.2 212 78.3
Medtr4g118420 Medicago truncatula HOM05D006695 ORTHO05D008239 1.6e-89 333.2 213 73.7
Sed0007686 Sechium edule HOM05D006695 ORTHO05D008239 2.7e-89 332.4 213 75.6
Sc25g0004560 Simmondsia chinensis HOM05D006695 ORTHO05D008239 2.7e-89 332.4 216 76.9
Haze_01012 Corylus avellana HOM05D006695 ORTHO05D008239 4.6e-89 331.6 216 75.9
unitig_8.g3083 Utricularia gibba HOM05D006695 ORTHO05D008239 4.6e-89 331.6 225 74.7
Lj4g0002890 Lotus japonicus HOM05D006695 ORTHO05D008239 6.0e-89 331.3 215 76.7
THA.LOC104821758 Tarenaya hassleriana HOM05D006695 ORTHO05D008239 6.0e-89 331.3 214 76.2
BcaNung00267 Brassica carinata HOM05D006695 ORTHO05D008239 1.0e-88 330.5 214 76.6
Duzib151G0948 Durio zibethinus HOM05D006695 ORTHO05D008239 1.0e-88 330.5 212 76.4
AL7G40000 Arabidopsis lyrata HOM05D006695 ORTHO05D008239 1.3e-88 330.1 216 76.9
A03p49160 Brassica napus HOM05D006695 ORTHO05D008239 1.7e-88 329.7 214 77.6
Carub.0007s2636 Capsella rubella HOM05D006695 ORTHO05D008239 1.7e-88 329.7 217 77.0
Cpa.g.sc16.75 Carica papaya HOM05D006695 ORTHO05D008239 1.7e-88 329.7 212 76.4
EL10Ac3g06533 Beta vulgaris HOM05D006695 ORTHO05D008239 3.0e-88 328.9 213 73.7
AT4G15520 Arabidopsis thaliana HOM05D006695 ORTHO05D008239 3.9e-88 328.6 217 77.0
CARHR222310 Cardamine hirsuta HOM05D006695 ORTHO05D008239 3.9e-88 328.6 214 77.1
Cfa015538 Carpinus fangiana HOM05D006695 ORTHO05D008239 3.9e-88 328.6 216 74.5
C01p27440 Brassica napus HOM05D006695 ORTHO05D008239 5.1e-88 328.2 214 76.6
Eucgr.H03643 Eucalyptus grandis HOM05D006695 ORTHO05D008239 6.6e-88 327.8 221 74.2
PGR004G1570 Punica granatum HOM05D006695 ORTHO05D008239 6.6e-88 327.8 212 75.0
A01p22050 Brassica napus HOM05D006695 ORTHO05D008239 8.6e-88 327.4 214 76.2
BolC1t02683H Brassica oleracea HOM05D006695 ORTHO05D008239 8.6e-88 327.4 214 76.2
BraA01t02111Z Brassica rapa HOM05D006695 ORTHO05D008239 8.6e-88 327.4 214 76.2
BraA03t14010Z Brassica rapa HOM05D006695 ORTHO05D008239 8.6e-88 327.4 218 77.1
Aa31LG9G1920 Aethionema arabicum HOM05D006695 ORTHO05D008239 1.1e-87 327.0 211 75.4
BcaC09g50242 Brassica carinata HOM05D006695 ORTHO05D008239 1.9e-87 326.2 214 76.2
BcaC09g50247 Brassica carinata HOM05D006695 ORTHO05D008239 1.9e-87 326.2 214 76.2
MELO3C006586.2 Cucumis melo HOM05D006695 ORTHO05D008239 4.3e-87 325.1 227 71.4
BcaC06g32939 Brassica carinata HOM05D006695 ORTHO05D008239 5.6e-87 324.7 216 75.9
Sp7g13770 Schrenkiella parvula HOM05D006695 ORTHO05D008239 7.3e-87 324.3 214 74.3
Sabra08G0162200 Salix brachista HOM05D006695 ORTHO05D008239 1.6e-86 323.2 211 76.3
AUR62040724 Chenopodium quinoa HOM05D006695 ORTHO05D008239 2.8e-86 322.4 215 73.5
HanXRQChr08g0235981 Helianthus annuus HOM05D006695 ORTHO05D008239 1.1e-85 320.5 225 70.2
CDE02G2295 Ceratophyllum demersum HOM05D006695 ORTHO05D008239 3.4e-84 315.5 198 76.8
Nitab4.5_0006860g0010 Nicotiana tabacum HOM05D006695 ORTHO05D008239 5.8e-84 314.7 227 72.2
ClCG05G005600 Citrullus lanatus HOM05D006695 ORTHO05D008239 4.9e-83 311.6 200 75.0
Os05g0141400 Oryza sativa ssp. japonica HOM05D006695 ORTHO05D008239 1.4e-82 310.1 217 71.9
Zm00001eb108650 Zea mays HOM05D006695 ORTHO05D008239 1.4e-82 310.1 213 72.3
Sed0005422 Sechium edule HOM05D006695 ORTHO05D008239 2.8e-78 295.8 201 71.6
HPP92_016066 Vanilla planifolia HOM05D006695 ORTHO05D008239 3.6e-78 295.4 211 68.2
BcaC06g33413 Brassica carinata HOM05D006695 ORTHO05D008239 3.1e-77 292.4 218 70.6
SEGI_18217 Sequoiadendron giganteum HOM05D006695 ORTHO05D008239 3.1e-77 292.4 203 69.0
SHI00328 Sapria himalayana HOM05D006695 ORTHO05D008239 1.5e-76 290.0 212 68.9
CDE08G0351 Ceratophyllum demersum HOM05D006695 ORTHO05D008239 1.1e-74 283.9 210 68.6
AagrBONN_evm.TU.Sc2ySwM_228.600 Anthoceros agrestis HOM05D006695 ORTHO05D008239 3.5e-73 278.9 192 68.2
ATR0580G301 Amborella trichopoda HOM05D006695 ORTHO05D008239 4.6e-73 278.5 219 64.8
C07p47200 Brassica napus HOM05D006695 ORTHO05D008239 8.7e-72 274.2 193 73.1
SMO347G0043 Selaginella moellendorffii HOM05D006695 ORTHO05D008239 6.2e-70 268.1 192 68.2
Mapoly0001s0064 Marchantia polymorpha HOM05D006695 ORTHO05D008239 1.1e-69 267.3 197 64.5
BolC7t45242H Brassica oleracea HOM05D006695 ORTHO05D008239 2.6e-68 262.7 188 72.3
Pp3c22_4480 Physcomitrium patens HOM05D006695 ORTHO05D008239 1.3e-67 260.4 224 58.5
Ca_21564_v3 Cicer arietinum L. HOM05D003956 ORTHO05D004850 5.5e-66 255.0 142 84.5
Dinv38348 Davidia involucrata HOM05D006695 ORTHO05D008239 1.3e-59 233.8 147 74.8
FAN12G3773 Fragaria x ananassa HOM05D006695 ORTHO05D008239 2.2e-59 233.0 258 53.1
vmacro08234 Vaccinium macrocarpon HOM05D006695 ORTHO05D008239 2.9e-59 232.6 154 74.0
Hma1.2p1_0643F.1_g194510 Hydrangea macrophylla HOM05D006695 ORTHO05D008239 8.4e-59 231.1 148 75.7
MD16G1178900 Malus domestica HOM05D006695 ORTHO05D008239 2.1e-57 226.5 145 75.9
Cre05.g238950 Chlamydomonas reinhardtii HOM05D006695 ORTHO05D008239 4.8e-54 215.3 163 60.1
MCO16G273 Micromonas commoda HOM05D006695 ORTHO05D008239 1.5e-47 193.7 191 50.3
FAN12G1880 Fragaria x ananassa HOM05D006695 ORTHO05D008239 3.7e-46 189.1 100 90.0
PRCOL_00001113 Prasinoderma coloniale HOM05D006695 ORTHO05D008239 3.4e-36 156.0 219 43.8
Glyma.06G247300 Glycine max HOM05D006695 ORTHO05D008239 2.9e-27 126.3 80 70.0
arahy.Tifrunner.gnm1.ann1.5C91KI Arachis hypogaea HOM05D006695 ORTHO05D008239 8.8e-24 114.8 62 82.3
SEGI_22589 Sequoiadendron giganteum HOM05D006695 ORTHO05D008239 2.6e-23 113.2 94 59.6
ATR0235G001 Amborella trichopoda HOM05D006695 ORTHO05D008239 3.3e-23 112.8 66 80.3
CBR_g29507 Chara braunii HOM05D006695 ORTHO05D008239 4.4e-23 112.5 87 60.9
CBR_g29509 Chara braunii HOM05D006695 ORTHO05D008239 1.3e-22 110.9 81 66.7
MD13G1177100 Malus domestica HOM05D006695 ORTHO05D008239 3.7e-14 82.8 64 65.6
Oeu037660.1 Olea europaea HOM05D006695 ORTHO05D008239 5.4e-13 79.0 145 37.9
GSVIVG01015302001 Vitis vinifera HOM05D005801 ORTHO05D008555 1.5e-07 60.8 153 28.8
ECA232G1677 Erigeron canadensis HOM05D006539 ORTHO05D008694 3.4e-07 59.7 202 26.2
unitig_22.g6330 Utricularia gibba HOM05D002837 ORTHO05D003310 4.4e-07 59.3 77 46.8
BolC9t59012H Brassica oleracea HOM05D006539 ORTHO05D008694 3.7e-06 56.2 142 27.5
C09p61730 Brassica napus HOM05D006539 ORTHO05D008694 4.9e-06 55.8 142 27.5
BcaC04g24242 Brassica carinata HOM05D006539 ORTHO05D008694 6.3e-06 55.5 142 26.8
A10p23500 Brassica napus HOM05D006539 ORTHO05D008694 6.3e-06 55.5 142 26.8
SHI02689 Sapria himalayana HOM05D005801 ORTHO05D008555 8.3e-06 55.1 170 25.3


User provided reference genes

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