Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow5G4482 Salvia bowleyana HOM05D001750 ORTHO05D001825 2.6e-19 97.8 53 100.0
ECA039G0010 Erigeron canadensis HOM05D001750 ORTHO05D001825 2.7e-16 87.8 52 86.5
ECA041G0001 Erigeron canadensis HOM05D001750 ORTHO05D001825 2.7e-16 87.8 52 86.5
SabraMtG0002600 Salix brachista HOM05D001750 ORTHO05D001825 2.7e-16 87.8 52 86.5
Zm00001eb384430 Zea mays HOM05D001750 ORTHO05D001825 2.7e-16 87.8 52 86.5
Zm00001eb384490 Zea mays HOM05D001750 ORTHO05D001825 2.7e-16 87.8 52 86.5
Zm00001eb384540 Zea mays HOM05D001750 ORTHO05D001825 2.7e-16 87.8 52 86.5
Zm00001eb437920 Zea mays HOM05D001750 ORTHO05D001825 2.7e-16 87.8 52 86.5
Zm00001eb438010 Zea mays HOM05D001750 ORTHO05D001825 2.7e-16 87.8 52 86.5
Zm00001eb439010 Zea mays HOM05D001750 ORTHO05D001825 2.7e-16 87.8 52 86.5
Zm00001eb440820 Zea mays HOM05D001750 ORTHO05D001825 2.7e-16 87.8 52 86.5
Zm00001eb442540 Zea mays HOM05D001750 ORTHO05D001825 2.7e-16 87.8 52 86.5
Ah.10g027940 Amaranthus hybridus HOM05D001750 ORTHO05D001825 3.5e-16 87.4 52 86.5
Ah.10g028650 Amaranthus hybridus HOM05D001750 ORTHO05D001825 3.5e-16 87.4 52 86.5
AUR62042331 Chenopodium quinoa HOM05D001750 ORTHO05D001825 3.5e-16 87.4 52 86.5
Dinv06672 Davidia involucrata HOM05D001750 ORTHO05D001825 3.5e-16 87.4 52 86.5
Dinv18904 Davidia involucrata HOM05D001750 ORTHO05D001825 3.5e-16 87.4 52 86.5
HanXRQMTg0579361 Helianthus annuus HOM05D001750 ORTHO05D001825 3.5e-16 87.4 52 86.5
Hma1.2p1_0034F.1_g021420 Hydrangea macrophylla HOM05D001750 ORTHO05D001825 3.5e-16 87.4 52 86.5
Hma1.2p1_1529F.1_g289140 Hydrangea macrophylla HOM05D001750 ORTHO05D001825 3.5e-16 87.4 52 86.5
Lj2C1233T24 Lonicera japonica HOM05D001750 ORTHO05D001825 3.5e-16 87.4 52 86.5
Peaxi162Scf00451g00046 Petunia axillaris HOM05D001750 ORTHO05D001825 3.5e-16 87.4 52 86.5
RhsimMtG0004100 Rhododendron simsii HOM05D001750 ORTHO05D001825 3.5e-16 87.4 52 84.6
SalBow1G5977 Salvia bowleyana HOM05D001750 ORTHO05D001825 3.5e-16 87.4 52 86.5
Hund27692 Selenicereus undatus HOM05D001750 ORTHO05D001825 3.5e-16 87.4 52 86.5
Hund29041 Selenicereus undatus HOM05D001750 ORTHO05D001825 3.5e-16 87.4 52 86.5
Hund29121 Selenicereus undatus HOM05D001750 ORTHO05D001825 3.5e-16 87.4 52 86.5
Hund31001 Selenicereus undatus HOM05D001750 ORTHO05D001825 3.5e-16 87.4 52 86.5
Solyc00g500098.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 3.5e-16 87.4 52 86.5
Solyc00g500169.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 3.5e-16 87.4 52 86.5
Solyc00g500271.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 3.5e-16 87.4 52 86.5
Solyc00g500317.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 3.5e-16 87.4 52 86.5
SGA_v2.0_scaffold245G44452 Striga asiatica HOM05D001750 ORTHO05D001825 3.5e-16 87.4 52 86.5
CSS0000875 Camellia sinensis var. sinensis HOM05D001750 ORTHO05D001825 7.9e-16 86.3 52 86.5
SHI48909 Sapria himalayana HOM05D001750 ORTHO05D001825 7.9e-16 86.3 52 84.6
Actinidia34923 Actinidia chinensis HOM05D001750 ORTHO05D001825 1.8e-15 85.1 52 84.6
Cfa005537 Carpinus fangiana HOM05D001750 ORTHO05D001825 1.8e-15 85.1 52 84.6
Cfa022996 Carpinus fangiana HOM05D001750 ORTHO05D001825 1.8e-15 85.1 52 84.6
Gorai.001G163400 Gossypium raimondii HOM05D001750 ORTHO05D001825 1.8e-15 85.1 52 84.6
MD13G1126900 Malus domestica HOM05D001750 ORTHO05D001825 1.8e-15 85.1 52 84.6
unitig_87.g28030 Utricularia gibba HOM05D001750 ORTHO05D001825 3.0e-15 84.3 52 84.6
Nitab4.5_0000085g0160 Nicotiana tabacum HOM05D001750 ORTHO05D001825 3.9e-15 84.0 51 84.3
Lj2A1235G104 Lonicera japonica HOM05D001750 ORTHO05D001825 6.7e-15 83.2 49 85.7
CAN.G134.25 Capsicum annuum HOM05D001750 ORTHO05D001825 1.1e-14 82.4 52 82.7
Atru.chr9.151 Acer truncatum HOM05D001750 ORTHO05D001825 1.5e-14 82.0 52 82.7
ATMG00513 Arabidopsis thaliana HOM05D001750 ORTHO05D001825 1.5e-14 82.0 52 82.7
arahy.Tifrunner.gnm1.ann1.BE3YYP Arachis hypogaea HOM05D001750 ORTHO05D001825 1.5e-14 82.0 52 82.7
arahy.Tifrunner.gnm1.ann1.KHE2M7 Arachis hypogaea HOM05D001750 ORTHO05D001825 1.5e-14 82.0 52 82.7
BolSC28t60406H Brassica oleracea HOM05D001750 ORTHO05D001825 1.5e-14 82.0 52 82.7
BolSC28t60420H Brassica oleracea HOM05D001750 ORTHO05D001825 1.5e-14 82.0 52 82.7
BraSC77t46633Z Brassica rapa HOM05D001750 ORTHO05D001825 1.5e-14 82.0 52 82.7
Cpa.g.sc900.3 Carica papaya HOM05D001750 ORTHO05D001825 1.5e-14 82.0 52 82.7
Ca_22167_v3 Cicer arietinum L. HOM05D001750 ORTHO05D001825 1.5e-14 82.0 52 82.7
Ca_22168_v3 Cicer arietinum L. HOM05D001750 ORTHO05D001825 1.5e-14 82.0 52 82.7
FvH4_c1g00470 Fragaria vesca HOM05D001750 ORTHO05D001825 1.5e-14 82.0 52 82.7
FAN14G4205 Fragaria x ananassa HOM05D001750 ORTHO05D001825 1.5e-14 82.0 52 82.7
Lalb_Chr17g0337371 Lupinus albus HOM05D001750 ORTHO05D001825 1.5e-14 82.0 52 82.7
Phvul.005G088400 Phaseolus vulgaris HOM05D001750 ORTHO05D001825 1.5e-14 82.0 52 82.7
RcHm_v2.0_MTg0498221 Rosa chinensis HOM05D001750 ORTHO05D001825 1.5e-14 82.0 52 82.7
Sp3g25940 Schrenkiella parvula HOM05D001750 ORTHO05D001825 1.5e-14 82.0 52 82.7
Sed0023702 Sechium edule HOM05D001750 ORTHO05D001825 1.5e-14 82.0 52 82.7
TPR.G28320 Trifolium pratense HOM05D001750 ORTHO05D001825 1.5e-14 82.0 52 82.7
VMungo0329G0001 Vigna mungo HOM05D001750 ORTHO05D001825 1.5e-14 82.0 52 82.7
Aa31sc483G10 Aethionema arabicum HOM05D001750 ORTHO05D001825 1.9e-14 81.6 52 82.7
Psat7g150640 Pisum sativum HOM05D001750 ORTHO05D001825 2.5e-14 81.3 52 82.7
ECA234G2654 Erigeron canadensis HOM05D001750 ORTHO05D001825 3.3e-14 80.9 52 82.7
FAN14G0206 Fragaria x ananassa HOM05D001750 ORTHO05D001825 4.3e-14 80.5 52 80.8
Nn117s43418 Nelumbo nucifera HOM05D001750 ORTHO05D001825 9.6e-14 79.3 52 80.8
Nn1g10108 Nelumbo nucifera HOM05D001750 ORTHO05D001825 9.6e-14 79.3 52 80.8
Nn1g10189 Nelumbo nucifera HOM05D001750 ORTHO05D001825 9.6e-14 79.3 52 80.8
Nn1g10194 Nelumbo nucifera HOM05D001750 ORTHO05D001825 9.6e-14 79.3 52 80.8
Nitab4.5_0000172g0080 Nicotiana tabacum HOM05D001750 ORTHO05D001825 1.3e-13 79.0 52 80.8
PGSC0003DMG400000928 Solanum tuberosum HOM05D001750 ORTHO05D001825 1.3e-13 79.0 52 78.8
Ca_15051_v3 Cicer arietinum L. HOM05D001750 ORTHO05D010080 2.1e-13 78.2 52 78.8
SHI35585 Sapria himalayana HOM05D001750 ORTHO05D001825 2.1e-13 78.2 48 83.3
CDE02G3422 Ceratophyllum demersum HOM05D001750 ORTHO05D001825 2.8e-13 77.8 51 80.4
MBI06_g25391_MAGBIO Magnolia biondii HOM05D001750 ORTHO05D001825 2.8e-13 77.8 51 80.4
Nitab4.5_0001152g0250 Nicotiana tabacum HOM05D001750 ORTHO05D001825 2.8e-13 77.8 52 80.8
LjContig00315g0010666 Lotus japonicus HOM05D001750 ORTHO05D001825 3.7e-13 77.4 48 83.3
PGSC0003DMG400029023 Solanum tuberosum HOM05D001750 ORTHO05D001825 3.7e-13 77.4 52 82.7
Lalb_Chr02g0153711 Lupinus albus HOM05D001750 ORTHO05D001825 1.1e-12 75.9 52 78.8
Nn117s43413 Nelumbo nucifera HOM05D001750 ORTHO05D001825 2.4e-12 74.7 53 79.2
Nitab4.5_0000593g0200 Nicotiana tabacum HOM05D001750 ORTHO05D001825 6.9e-12 73.2 52 75.0
SHI29513 Sapria himalayana HOM05D001750 ORTHO05D001825 6.9e-12 73.2 51 72.5
Glyma.15G187600 Glycine max HOM05D001750 ORTHO05D001825 9.0e-12 72.8 45 84.4
Glyma.15G187800 Glycine max HOM05D001750 ORTHO05D001825 9.0e-12 72.8 45 84.4
PSO017G5352 Papaver somniferum HOM05D001750 ORTHO05D001825 1.5e-11 72.0 51 74.5
Nitab4.5_0001788g0200 Nicotiana tabacum HOM05D001750 ORTHO05D001825 5.8e-11 70.1 43 83.7
QL06p024879 Quercus lobata HOM05D001750 ORTHO05D001825 2.2e-10 68.2 52 71.2
Peaxi162Scf00111g00125 Petunia axillaris HOM05D000478 ORTHO05D000345 4.9e-10 67.0 49 71.4
SMO053G0013 Selaginella moellendorffii HOM05D001750 ORTHO05D001825 4.9e-10 67.0 52 67.3
TAR022G0005 Trochodendron aralioides HOM05D001750 ORTHO05D001825 4.2e-09 63.9 52 57.7
SEGI_05810 Sequoiadendron giganteum HOM05D001750 ORTHO05D001825 1.2e-08 62.4 48 70.8
Lsat_1_v5_gn_4_66441 Lactuca sativa HOM05D001750 ORTHO05D001825 3.5e-08 60.8 37 81.1
SEGI_04456 Sequoiadendron giganteum HOM05D001750 ORTHO05D001825 4.6e-08 60.5 52 63.5
MBI05_g05342_MAGBIO Magnolia biondii HOM05D001750 ORTHO05D001825 2.5e-06 54.7 51 64.7


User provided reference genes

Program Settings