Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow5G4198 Salvia bowleyana HOM05D006566 ORTHO05D004366 4.3e-89 331.3 164 100.0
MSTRG.23070 Avicennia marina HOM05D006566 ORTHO05D004366 8.0e-43 177.6 120 74.2
SGA_v2.0_scaffold56G20079 Striga asiatica HOM05D006566 ORTHO05D004366 1.1e-39 167.2 120 70.8
HanXRQChr14g0438811 Helianthus annuus HOM05D006566 ORTHO05D004366 6.2e-35 151.4 124 62.9
Hma1.2p1_0572F.1_g181020 Hydrangea macrophylla HOM05D006566 ORTHO05D004366 5.2e-34 148.3 120 64.2
Nn3g17040 Nelumbo nucifera HOM05D006566 ORTHO05D004366 5.2e-34 148.3 120 61.7
Migut.I00099 Erythranthe guttata HOM05D006566 ORTHO05D004366 8.9e-34 147.5 121 67.8
Lsat_1_v5_gn_5_18061 Lactuca sativa HOM05D006566 ORTHO05D004366 1.5e-33 146.7 121 64.5
ECA246G4585 Erigeron canadensis HOM05D006566 ORTHO05D004366 2.0e-33 146.4 124 59.7
Rhsim12G0161000 Rhododendron simsii HOM05D006566 ORTHO05D004366 2.6e-33 146.0 113 66.4
CiPaw.12G022600 Carya illinoinensis HOM05D006566 ORTHO05D004366 3.4e-33 145.6 124 61.3
unitig_749.g13457 Utricularia gibba HOM05D006566 ORTHO05D004366 3.4e-33 145.6 118 62.7
Atru.chr9.2391 Acer truncatum HOM05D006566 ORTHO05D004366 4.4e-33 145.2 120 60.8
PGR044G1407 Punica granatum HOM05D006566 ORTHO05D004366 4.4e-33 145.2 120 63.3
TAR374G0618 Trochodendron aralioides HOM05D006566 ORTHO05D004366 4.4e-33 145.2 120 60.8
CSS0033214 Camellia sinensis var. sinensis HOM05D006566 ORTHO05D004366 1.7e-32 143.3 120 61.7
CSS0042495 Camellia sinensis var. sinensis HOM05D006566 ORTHO05D004366 1.7e-32 143.3 120 61.7
GSVIVG01007834001 Vitis vinifera HOM05D006566 ORTHO05D004366 2.9e-32 142.5 118 62.7
QL10p013685 Quercus lobata HOM05D006566 ORTHO05D004366 3.7e-32 142.1 120 62.5
Nitab4.5_0000026g0410 Nicotiana tabacum HOM05D006566 ORTHO05D004366 1.4e-31 140.2 121 62.0
Actinidia34964 Actinidia chinensis HOM05D006566 ORTHO05D004366 2.4e-31 139.4 120 60.0
Nitab4.5_0003577g0010 Nicotiana tabacum HOM05D006566 ORTHO05D004366 2.4e-31 139.4 121 62.8
Cfa019059 Carpinus fangiana HOM05D006566 ORTHO05D004366 5.4e-31 138.3 120 61.7
Eucgr.K02884 Eucalyptus grandis HOM05D006566 ORTHO05D004366 2.7e-30 136.0 120 60.0
Actinidia19077 Actinidia chinensis HOM05D006566 ORTHO05D004366 4.6e-30 135.2 120 58.3
THA.LOC104821469 Tarenaya hassleriana HOM05D006566 ORTHO05D004366 1.0e-29 134.0 112 64.3
vmacro16583 Vaccinium macrocarpon HOM05D006566 ORTHO05D004366 2.3e-29 132.9 114 59.6
Manes.06G099800 Manihot esculenta HOM05D006566 ORTHO05D004366 3.0e-29 132.5 120 58.3
CAN.G1932.4 Capsicum annuum HOM05D006566 ORTHO05D004366 3.9e-29 132.1 119 59.7
MD14G1188300 Malus domestica HOM05D006566 ORTHO05D004366 3.9e-29 132.1 118 55.1
Potri.015G070100 Populus trichocarpa HOM05D006566 ORTHO05D004366 5.0e-29 131.7 114 59.6
Sabra15G0094500 Salix brachista HOM05D006566 ORTHO05D004366 8.6e-29 131.0 122 55.7
Thecc.03G002700 Theobroma cacao HOM05D006566 ORTHO05D004366 8.6e-29 131.0 113 59.3
CsaV3_1G008150 Cucumis sativus L. HOM05D006566 ORTHO05D004366 1.1e-28 130.6 121 57.0
Sabra15G0095700 Salix brachista HOM05D006566 ORTHO05D004366 1.1e-28 130.6 122 55.7
Prupe.5G180400 Prunus persica HOM05D006566 ORTHO05D004366 1.5e-28 130.2 117 56.4
CARHR156850 Cardamine hirsuta HOM05D006566 ORTHO05D004366 2.5e-28 129.4 121 57.0
MD06G1182300 Malus domestica HOM05D006566 ORTHO05D004366 2.5e-28 129.4 118 55.9
DCAR_026101 Daucus carota HOM05D006566 ORTHO05D004366 3.3e-28 129.0 120 57.5
AT3G48120 Arabidopsis thaliana HOM05D006566 ORTHO05D004366 4.3e-28 128.6 121 55.4
Cc04_g16230 Coffea canephora HOM05D006566 ORTHO05D004366 4.3e-28 128.6 122 55.7
AL5G27450 Arabidopsis lyrata HOM05D006566 ORTHO05D004366 5.6e-28 128.3 121 53.7
arahy.Tifrunner.gnm1.ann1.0W0WAG Arachis hypogaea HOM05D006566 ORTHO05D004366 7.3e-28 127.9 110 59.1
Sabra15G0094200 Salix brachista HOM05D006566 ORTHO05D004366 7.3e-28 127.9 114 57.9
TPR.G38369 Trifolium pratense HOM05D006566 ORTHO05D004366 7.3e-28 127.9 111 60.4
arahy.Tifrunner.gnm1.ann1.1VUR4R Arachis hypogaea HOM05D006566 ORTHO05D004366 9.5e-28 127.5 110 59.1
CANSAT80G0898 Cannabis sativa HOM05D006566 ORTHO05D004366 9.5e-28 127.5 126 53.2
Aa31LG4G16730 Aethionema arabicum HOM05D006566 ORTHO05D004366 1.6e-27 126.7 127 52.0
arahy.Tifrunner.gnm1.ann1.JH7UH9 Arachis hypogaea HOM05D006566 ORTHO05D004366 1.6e-27 126.7 110 58.2
Carub.0005s1423 Capsella rubella HOM05D006566 ORTHO05D004366 2.8e-27 125.9 121 53.7
Sp5g13910 Schrenkiella parvula HOM05D006566 ORTHO05D004366 3.6e-27 125.6 121 53.7
Glyma.05G033200 Glycine max HOM05D006566 ORTHO05D004366 6.2e-27 124.8 110 59.1
Sopen12g012820 Solanum pennellii HOM05D006566 ORTHO05D004366 8.1e-27 124.4 121 55.4
Lj4g0023975 Lotus japonicus HOM05D006566 ORTHO05D004366 1.1e-26 124.0 110 58.2
Solyc12g027740.3 Solanum lycopersicum HOM05D006566 ORTHO05D004366 1.1e-26 124.0 121 55.4
VMungo1215G1614 Vigna mungo HOM05D006566 ORTHO05D004366 1.1e-26 124.0 110 57.3
Sed0021978 Sechium edule HOM05D006566 ORTHO05D004366 1.4e-26 123.6 120 55.8
Cpa.g.sc35.28 Carica papaya HOM05D006566 ORTHO05D004366 1.8e-26 123.2 112 57.1
Gohir.D08G106700 Gossypium hirsutum HOM05D006566 ORTHO05D004366 2.3e-26 122.9 120 55.0
Gorai.004G113800 Gossypium raimondii HOM05D006566 ORTHO05D004366 2.3e-26 122.9 120 55.0
Phvul.003G196400 Phaseolus vulgaris HOM05D006566 ORTHO05D004366 2.3e-26 122.9 110 57.3
Glyma.17G093800 Glycine max HOM05D006566 ORTHO05D004366 3.1e-26 122.5 110 58.2
COL.COLO4_21450 Corchorus olitorius HOM05D006566 ORTHO05D004366 4.0e-26 122.1 113 54.9
Hund02706 Selenicereus undatus HOM05D006566 ORTHO05D004366 4.0e-26 122.1 123 52.0
Psat4g055720 Pisum sativum HOM05D006566 ORTHO05D004366 6.8e-26 121.3 111 55.9
Haze_07429 Corylus avellana HOM05D006566 ORTHO05D004366 1.2e-25 120.6 110 59.1
BcaB01g00844 Brassica carinata HOM05D006566 ORTHO05D004366 1.5e-25 120.2 125 52.0
BcaC07g39293 Brassica carinata HOM05D006566 ORTHO05D004366 5.8e-25 118.2 127 53.5
BcaC07g39294 Brassica carinata HOM05D006566 ORTHO05D004366 5.8e-25 118.2 127 53.5
BolC8t49939H Brassica oleracea HOM05D006566 ORTHO05D004366 5.8e-25 118.2 127 53.5
MBI16_g07135_MAGBIO Magnolia biondii HOM05D006566 ORTHO05D004366 7.5e-25 117.9 118 55.1
RcHm_v2.0_Chr7g0179841 Rosa chinensis HOM05D006566 ORTHO05D004366 7.5e-25 117.9 117 53.8
Ah.11g046290 Amaranthus hybridus HOM05D006566 ORTHO05D004366 9.9e-25 117.5 128 47.7
C08p23010 Brassica napus HOM05D006566 ORTHO05D004366 9.9e-25 117.5 120 53.3
Thhalv10010547m.g Eutrema salsugineum HOM05D006566 ORTHO05D004366 9.9e-25 117.5 121 50.4
Aqoxy3G00871 Aquilegia oxysepala HOM05D006566 ORTHO05D004366 1.3e-24 117.1 127 50.4
Ca_21878_v3 Cicer arietinum L. HOM05D006566 ORTHO05D004366 1.7e-24 116.7 111 54.1
Ca_21886_v3 Cicer arietinum L. HOM05D006566 ORTHO05D004366 1.7e-24 116.7 111 54.1
A06p19570 Brassica napus HOM05D006566 ORTHO05D004366 2.2e-24 116.3 125 50.4
Lalb_Chr07g0182501 Lupinus albus HOM05D006566 ORTHO05D004366 2.9e-24 115.9 110 56.4
Zm00001eb156370 Zea mays HOM05D006566 ORTHO05D004366 2.9e-24 115.9 128 52.3
PSO161G0080 Papaver somniferum HOM05D006566 ORTHO05D004366 1.9e-23 113.2 128 46.9
FvH4_5g16290 Fragaria vesca HOM05D006566 ORTHO05D004366 7.1e-23 111.3 117 51.3
FAN18G1223 Fragaria x ananassa HOM05D006566 ORTHO05D004366 7.1e-23 111.3 117 51.3
Os01g0687600 Oryza sativa ssp. japonica HOM05D006566 ORTHO05D004366 7.1e-23 111.3 124 47.6
ClCG01G014160 Citrullus lanatus HOM05D006566 ORTHO05D004366 1.6e-22 110.2 119 52.1
FAN04G3214 Fragaria x ananassa HOM05D006566 ORTHO05D004366 4.6e-22 108.6 119 49.6
AUR62008294 Chenopodium quinoa HOM05D006566 ORTHO05D004366 1.7e-21 106.7 122 48.4
FAN13G1045 Fragaria x ananassa HOM05D006566 ORTHO05D004366 2.3e-21 106.3 117 49.6
FAN08G1664 Fragaria x ananassa HOM05D006566 ORTHO05D004366 3.0e-21 105.9 117 50.4
MELO3C002232.2 Cucumis melo HOM05D006566 ORTHO05D004366 1.5e-20 103.6 121 48.8
Medtr4g106550 Medicago truncatula HOM05D006566 ORTHO05D004366 7.3e-20 101.3 111 50.5
Oeu005686.3 Olea europaea HOM05D006566 ORTHO05D004366 9.5e-20 100.9 90 56.7
Lj5A120T53 Lonicera japonica HOM05D006566 ORTHO05D004366 1.2e-19 100.5 91 53.8
EL10Ac5g10849 Beta vulgaris HOM05D006566 ORTHO05D004366 1.6e-19 100.1 122 43.4
arahy.Tifrunner.gnm1.ann1.SD125V Arachis hypogaea HOM05D006566 ORTHO05D004366 4.7e-19 98.6 103 48.5
BraA06t25037Z Brassica rapa HOM05D006566 ORTHO05D004366 8.9e-18 94.4 111 47.7
arahy.Tifrunner.gnm1.ann1.USZI6Q Arachis hypogaea HOM05D006566 ORTHO05D004366 2.0e-17 93.2 99 51.5
Ciclev10023573m.g Citrus clementina HOM05D006566 ORTHO05D004366 2.0e-17 93.2 90 51.1
CDE06G0758 Ceratophyllum demersum HOM05D006566 ORTHO05D004366 8.4e-16 87.8 109 46.8
Peaxi162Scf00496g00038 Petunia axillaris HOM05D006566 ORTHO05D004366 1.4e-15 87.0 89 52.8
AUR62031056 Chenopodium quinoa HOM05D006566 ORTHO05D004366 6.0e-14 81.6 74 54.1
ATR0712G004 Amborella trichopoda HOM05D006566 ORTHO05D004366 7.8e-14 81.3 127 40.9
arahy.Tifrunner.gnm1.ann1.P21766 Arachis hypogaea HOM05D008215 ORTHO05D004366 8.7e-13 77.8 120 40.8
arahy.Tifrunner.gnm1.ann1.281UCZ Arachis hypogaea HOM05D008215 ORTHO05D004366 8.1e-11 71.2 109 38.5
arahy.Tifrunner.gnm1.ann1.8QJJ59 Arachis hypogaea HOM05D008215 ORTHO05D004366 8.1e-11 71.2 109 38.5
arahy.Tifrunner.gnm1.ann1.UC8GQG Arachis hypogaea HOM05D008215 ORTHO05D004366 8.1e-11 71.2 112 37.5
Oeu042970.1 Olea europaea HOM05D006566 ORTHO05D004366 1.1e-10 70.9 85 50.6
SEGI_22753 Sequoiadendron giganteum HOM05D006566 ORTHO05D004366 2.4e-10 69.7 149 31.5
arahy.Tifrunner.gnm1.ann1.08U2RY Arachis hypogaea HOM05D008215 ORTHO05D004366 5.2e-10 68.6 109 38.5
Mapoly0207s0010 Marchantia polymorpha HOM05D006566 ORTHO05D004366 6.9e-10 68.2 156 32.1
arahy.Tifrunner.gnm1.ann1.38ZYM9 Arachis hypogaea HOM05D008215 ORTHO05D004366 9.0e-10 67.8 79 43.0
arahy.Tifrunner.gnm1.ann1.N3K4CS Arachis hypogaea HOM05D008215 ORTHO05D004366 2.0e-09 66.6 97 41.2
arahy.Tifrunner.gnm1.ann1.696ALD Arachis hypogaea HOM05D008215 ORTHO05D004366 2.6e-09 66.2 75 45.3
SMO367G0338 Selaginella moellendorffii HOM05D013869 ORTHO05D015602 2.6e-09 66.2 130 33.8
AagrBONN_evm.TU.Sc2ySwM_344.1183 Anthoceros agrestis HOM05D006566 ORTHO05D004366 9.9e-09 64.3 117 35.0
arahy.Tifrunner.gnm1.ann1.P43TQX Arachis hypogaea HOM05D006566 ORTHO05D004366 2.2e-08 63.2 42 73.8
arahy.Tifrunner.gnm1.ann1.YEU6LJ Arachis hypogaea HOM05D006566 ORTHO05D004366 8.4e-08 61.2 62 46.8
arahy.Tifrunner.gnm1.ann1.1P551D Arachis hypogaea HOM05D008215 ORTHO05D004366 4.2e-07 58.9 103 35.9
arahy.Tifrunner.gnm1.ann1.0AYN0M Arachis hypogaea HOM05D008215 ORTHO05D004366 9.3e-07 57.8 100 37.0
arahy.Tifrunner.gnm1.ann1.U9CRBQ Arachis hypogaea HOM05D008215 ORTHO05D004366 1.2e-06 57.4 100 37.0
arahy.Tifrunner.gnm1.ann1.3DHQ20 Arachis hypogaea HOM05D008215 ORTHO05D004366 2.1e-06 56.6 106 34.0
arahy.Tifrunner.gnm1.ann1.1NHG9F Arachis hypogaea HOM05D008215 ORTHO05D004366 3.5e-06 55.8 114 31.6
arahy.Tifrunner.gnm1.ann1.P1RV09 Arachis hypogaea HOM05D008215 ORTHO05D004366 3.5e-06 55.8 100 36.0
arahy.Tifrunner.gnm1.ann1.TAU4F3 Arachis hypogaea HOM05D008215 ORTHO05D004366 6.0e-06 55.1 89 37.1


User provided reference genes

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