Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow5G4173 Salvia bowleyana HOM05D003212 ORTHO05D003959 4.1e-134 481.5 259 100.0
SalBow5G0323 Salvia bowleyana HOM05D003212 ORTHO05D003959 9.1e-134 480.3 259 99.6
SalBow5G1158 Salvia bowleyana HOM05D003212 ORTHO05D003959 1.9e-83 313.2 243 74.9
SalBow5G4847 Salvia bowleyana HOM05D003212 ORTHO05D003959 1.7e-79 300.1 160 98.8
MSTRG.16992 Avicennia marina HOM05D003212 ORTHO05D003959 9.6e-67 257.7 157 86.0
Migut.B01220 Erythranthe guttata HOM05D003212 ORTHO05D003959 1.3e-66 257.3 157 87.3
MSTRG.20521 Avicennia marina HOM05D003212 ORTHO05D003959 2.4e-65 253.1 147 89.1
unitig_26.g9606 Utricularia gibba HOM05D003212 ORTHO05D003959 4.0e-65 252.3 220 66.4
Oeu003925.2 Olea europaea HOM05D003212 ORTHO05D003959 5.3e-65 251.9 157 84.1
SGA_v2.0_scaffold124G33627 Striga asiatica HOM05D003212 ORTHO05D003959 9.0e-65 251.1 157 84.7
Cc02_g26670 Coffea canephora HOM05D003212 ORTHO05D003959 3.8e-63 245.7 147 84.4
Lj7A581T52 Lonicera japonica HOM05D003212 ORTHO05D003959 6.5e-63 245.0 147 84.4
Oeu002655.1 Olea europaea HOM05D003212 ORTHO05D003959 3.2e-62 242.7 147 86.4
Oeu056551.1 Olea europaea HOM05D003212 ORTHO05D003959 3.2e-62 242.7 147 84.4
FAN01G2682 Fragaria x ananassa HOM05D003212 ORTHO05D003959 1.6e-61 240.4 155 80.6
Migut.N01834 Erythranthe guttata HOM05D003212 ORTHO05D003959 2.7e-61 239.6 147 83.7
FvH4_7g02810 Fragaria vesca HOM05D003212 ORTHO05D003959 6.0e-61 238.4 155 80.0
FAN06G3951 Fragaria x ananassa HOM05D003212 ORTHO05D003959 6.0e-61 238.4 155 80.0
FAN10G3499 Fragaria x ananassa HOM05D003212 ORTHO05D003959 6.0e-61 238.4 155 80.0
MD09G1262400 Malus domestica HOM05D003212 ORTHO05D003959 7.9e-61 238.0 146 83.6
Dinv32034 Davidia involucrata HOM05D003212 ORTHO05D003959 2.3e-60 236.5 150 78.7
Sopen11g027550 Solanum pennellii HOM05D003212 ORTHO05D003959 2.3e-60 236.5 151 80.8
Nitab4.5_0000893g0050 Nicotiana tabacum HOM05D003212 ORTHO05D003959 3.0e-60 236.1 151 80.8
CAN.G745.39 Capsicum annuum HOM05D003212 ORTHO05D003959 3.9e-60 235.7 151 80.8
Hma1.2p1_0384F.1_g141010 Hydrangea macrophylla HOM05D003212 ORTHO05D003959 3.9e-60 235.7 150 80.7
CANSAT80G2392 Cannabis sativa HOM05D003212 ORTHO05D003959 5.1e-60 235.3 147 79.6
CiPaw.14G006800 Carya illinoinensis HOM05D003212 ORTHO05D003959 5.1e-60 235.3 157 75.8
RcHm_v2.0_Chr1g0323241 Rosa chinensis HOM05D003212 ORTHO05D003959 5.1e-60 235.3 157 79.6
Actinidia21523 Actinidia chinensis HOM05D003212 ORTHO05D003959 8.7e-60 234.6 150 80.7
PGSC0003DMG400019620 Solanum tuberosum HOM05D003212 ORTHO05D003959 8.7e-60 234.6 147 82.3
Prupe.2G032600 Prunus persica HOM05D003212 ORTHO05D003959 1.1e-59 234.2 150 80.7
Rhsim01G0123800 Rhododendron simsii HOM05D003212 ORTHO05D003959 1.5e-59 233.8 150 78.7
Solyc11g068830.2 Solanum lycopersicum HOM05D003212 ORTHO05D003959 1.5e-59 233.8 151 80.1
CsaV3_5G024820 Cucumis sativus L. HOM05D003212 ORTHO05D003959 1.9e-59 233.4 155 75.5
ClCG01G007740 Citrullus lanatus HOM05D003212 ORTHO05D003959 2.5e-59 233.0 155 74.8
SGA_v2.0_scaffold232G43508 Striga asiatica HOM05D003212 ORTHO05D003959 2.5e-59 233.0 147 78.2
Haze_03071 Corylus avellana HOM05D003212 ORTHO05D003959 3.3e-59 232.6 150 78.7
MELO3C005122.2 Cucumis melo HOM05D003212 ORTHO05D003959 3.3e-59 232.6 155 75.5
Lsat_1_v5_gn_5_157360 Lactuca sativa HOM05D003212 ORTHO05D003959 3.3e-59 232.6 155 78.1
Aa31LG1G5360 Aethionema arabicum HOM05D003212 ORTHO05D003959 4.3e-59 232.3 147 79.6
CSS0010475 Camellia sinensis var. sinensis HOM05D003212 ORTHO05D003959 4.3e-59 232.3 150 78.0
CSS0011806 Camellia sinensis var. sinensis HOM05D003212 ORTHO05D003959 4.3e-59 232.3 150 78.0
Sed0011268 Sechium edule HOM05D003212 ORTHO05D003959 1.3e-58 230.7 155 73.5
vmacro12692 Vaccinium macrocarpon HOM05D003212 ORTHO05D003959 1.3e-58 230.7 151 78.1
Ciclev10001014m.g Citrus clementina HOM05D003212 ORTHO05D003959 1.6e-58 230.3 150 76.0
Sed0013182 Sechium edule HOM05D003212 ORTHO05D003959 2.2e-58 229.9 157 74.5
Sp5g07950 Schrenkiella parvula HOM05D003212 ORTHO05D003959 2.8e-58 229.6 147 78.2
DCAR_006596 Daucus carota HOM05D003212 ORTHO05D003959 3.7e-58 229.2 147 82.3
ECA248G3712 Erigeron canadensis HOM05D003212 ORTHO05D003959 3.7e-58 229.2 151 79.5
Atru.chr12.1386 Acer truncatum HOM05D003212 ORTHO05D003959 8.2e-58 228.0 150 76.0
Nn7g36634 Nelumbo nucifera HOM05D003212 ORTHO05D003959 8.2e-58 228.0 147 78.9
AT3G54470 Arabidopsis thaliana HOM05D003212 ORTHO05D003959 1.1e-57 227.6 147 77.6
Thhalv10010334m.g Eutrema salsugineum HOM05D003212 ORTHO05D003959 1.1e-57 227.6 147 77.6
BcaB02g08443 Brassica carinata HOM05D003212 ORTHO05D003959 1.4e-57 227.3 157 73.9
A07p22130 Brassica napus HOM05D003212 ORTHO05D003959 1.4e-57 227.3 147 76.9
Peaxi162Scf01010g00217 Petunia axillaris HOM05D003212 ORTHO05D003959 1.4e-57 227.3 151 78.8
TAR369G1042 Trochodendron aralioides HOM05D003212 ORTHO05D003959 1.4e-57 227.3 147 77.6
Atru.chr12.1389 Acer truncatum HOM05D003212 ORTHO05D003959 1.8e-57 226.9 150 75.3
AL5G35520 Arabidopsis lyrata HOM05D003212 ORTHO05D003959 2.4e-57 226.5 147 77.6
A04p05360 Brassica napus HOM05D003212 ORTHO05D003959 2.4e-57 226.5 147 76.2
BolC4t25379H Brassica oleracea HOM05D003212 ORTHO05D003959 2.4e-57 226.5 157 73.9
BraA04t16236Z Brassica rapa HOM05D003212 ORTHO05D003959 2.4e-57 226.5 147 76.2
THA.LOC104824191 Tarenaya hassleriana HOM05D003212 ORTHO05D003959 2.4e-57 226.5 147 77.6
Manes.11G004200 Manihot esculenta HOM05D003212 ORTHO05D003959 4.1e-57 225.7 147 77.6
BraA07t29896Z Brassica rapa HOM05D003212 ORTHO05D003959 5.3e-57 225.3 147 76.2
BcaC08g44683 Brassica carinata HOM05D003212 ORTHO05D003959 6.9e-57 224.9 147 75.5
C06p22180 Brassica napus HOM05D003212 ORTHO05D003959 6.9e-57 224.9 147 75.5
BolC6t37404H Brassica oleracea HOM05D003212 ORTHO05D003959 6.9e-57 224.9 147 75.5
CARHR164370 Cardamine hirsuta HOM05D003212 ORTHO05D003959 6.9e-57 224.9 147 76.2
PGR031G0586 Punica granatum HOM05D003212 ORTHO05D003959 6.9e-57 224.9 147 78.2
EL10Ac2g02822 Beta vulgaris HOM05D003212 ORTHO05D003959 9.0e-57 224.6 153 79.1
TPR.G17794 Trifolium pratense HOM05D003212 ORTHO05D003959 9.0e-57 224.6 151 74.8
PSO384G1532 Papaver somniferum HOM05D003212 ORTHO05D003959 1.2e-56 224.2 147 75.5
Medtr3g017580 Medicago truncatula HOM05D003212 ORTHO05D003959 2.0e-56 223.4 147 76.9
Psat5g219440 Pisum sativum HOM05D003212 ORTHO05D003959 2.0e-56 223.4 147 77.6
QL04p014524 Quercus lobata HOM05D003212 ORTHO05D003959 2.0e-56 223.4 151 73.5
QL04p014886 Quercus lobata HOM05D003212 ORTHO05D003959 2.0e-56 223.4 151 73.5
BcaC02g09067 Brassica carinata HOM05D003212 ORTHO05D003959 2.6e-56 223.0 157 72.6
C04p38050 Brassica napus HOM05D003212 ORTHO05D003959 2.6e-56 223.0 157 72.6
Hund15723 Selenicereus undatus HOM05D003212 ORTHO05D003959 2.6e-56 223.0 153 79.1
PSO339G4798 Papaver somniferum HOM05D003212 ORTHO05D003959 4.5e-56 222.2 147 75.5
BcaB02g07736 Brassica carinata HOM05D003212 ORTHO05D003959 5.9e-56 221.9 151 72.8
Lj3g0024329 Lotus japonicus HOM05D003212 ORTHO05D003959 5.9e-56 221.9 146 78.1
Medtr1g025060 Medicago truncatula HOM05D003212 ORTHO05D003959 5.9e-56 221.9 147 76.2
Potri.001G026300 Populus trichocarpa HOM05D003212 ORTHO05D003959 5.9e-56 221.9 147 74.1
Hund13345 Selenicereus undatus HOM05D003212 ORTHO05D003959 5.9e-56 221.9 155 74.8
Glyma.11G154200 Glycine max HOM05D003212 ORTHO05D003959 7.7e-56 221.5 147 76.2
Phvul.011G207800 Phaseolus vulgaris HOM05D003212 ORTHO05D003959 7.7e-56 221.5 147 76.2
Potri.T125906 Populus trichocarpa HOM05D003212 ORTHO05D003959 7.7e-56 221.5 147 75.5
Lalb_Chr14g0366121 Lupinus albus HOM05D003212 ORTHO05D003959 1.0e-55 221.1 147 75.5
Potri.003G198501 Populus trichocarpa HOM05D003212 ORTHO05D003959 1.0e-55 221.1 147 74.8
COL.COLO4_09453 Corchorus olitorius HOM05D003212 ORTHO05D003959 1.3e-55 220.7 146 78.1
Aqoxy2G00340 Aquilegia oxysepala HOM05D003212 ORTHO05D003959 1.7e-55 220.3 150 75.3
Ca_18881_v3 Cicer arietinum L. HOM05D003212 ORTHO05D003959 1.7e-55 220.3 157 73.9
Ca_23514_v3 Cicer arietinum L. HOM05D003212 ORTHO05D003959 2.2e-55 219.9 147 75.5
Sabra01G0019400 Salix brachista HOM05D003212 ORTHO05D003959 2.2e-55 219.9 147 73.5
arahy.Tifrunner.gnm1.ann1.HVGJ4H Arachis hypogaea HOM05D003212 ORTHO05D003959 2.9e-55 219.5 157 72.6
Carub.0005s2109 Capsella rubella HOM05D003212 ORTHO05D003959 2.9e-55 219.5 147 73.5
VMungo1080G0024 Vigna mungo HOM05D003212 ORTHO05D003959 2.9e-55 219.5 147 76.2
Psat0s1718g0040 Pisum sativum HOM05D003212 ORTHO05D003959 3.8e-55 219.2 147 73.5
Sc11g0006540 Simmondsia chinensis HOM05D003212 ORTHO05D003959 3.8e-55 219.2 157 75.2
Thecc.07G075400 Theobroma cacao HOM05D003212 ORTHO05D003959 3.8e-55 219.2 146 77.4
VMungo1127G0513 Vigna mungo HOM05D003212 ORTHO05D003959 3.8e-55 219.2 147 74.1
TWI38G0920 Tripterygium wilfordii HOM05D003212 ORTHO05D003959 5.0e-55 218.8 151 74.2
arahy.Tifrunner.gnm1.ann1.HRMJ8R Arachis hypogaea HOM05D003212 ORTHO05D003959 6.5e-55 218.4 157 72.0
AUR62001997 Chenopodium quinoa HOM05D003212 ORTHO05D003959 6.5e-55 218.4 150 76.7
Lj3g0002083 Lotus japonicus HOM05D003212 ORTHO05D003959 6.5e-55 218.4 147 76.2
Phvul.005G029300 Phaseolus vulgaris HOM05D003212 ORTHO05D003959 6.5e-55 218.4 147 75.5
HanXRQChr13g0406671 Helianthus annuus HOM05D003212 ORTHO05D003959 8.5e-55 218.0 147 74.8
Sabra03G0147800 Salix brachista HOM05D003212 ORTHO05D003959 8.5e-55 218.0 147 74.8
Glyma.13G198700 Glycine max HOM05D003212 ORTHO05D003959 1.1e-54 217.6 147 74.8
Medtr8g038390 Medicago truncatula HOM05D003212 ORTHO05D003959 1.1e-54 217.6 147 74.8
Ca_10473_v3 Cicer arietinum L. HOM05D003212 ORTHO05D003959 1.9e-54 216.9 147 74.1
Gohir.D05G360100 Gossypium hirsutum HOM05D003212 ORTHO05D003959 1.9e-54 216.9 146 74.7
Gorai.009G432600 Gossypium raimondii HOM05D003212 ORTHO05D003959 1.9e-54 216.9 146 74.7
Lalb_Chr03g0032831 Lupinus albus HOM05D003212 ORTHO05D003959 1.9e-54 216.9 147 73.5
Ah.12g062950 Amaranthus hybridus HOM05D003212 ORTHO05D003959 2.5e-54 216.5 150 75.3
arahy.Tifrunner.gnm1.ann1.J24RTT Arachis hypogaea HOM05D003212 ORTHO05D003959 2.5e-54 216.5 147 74.8
Gohir.A13G144600 Gossypium hirsutum HOM05D003212 ORTHO05D003959 2.5e-54 216.5 147 74.8
TPR.G36892 Trifolium pratense HOM05D003212 ORTHO05D003959 4.2e-54 215.7 147 72.8
arahy.Tifrunner.gnm1.ann1.28N5NC Arachis hypogaea HOM05D003212 ORTHO05D003959 7.2e-54 214.9 147 74.1
AUR62026849 Chenopodium quinoa HOM05D003212 ORTHO05D003959 7.2e-54 214.9 153 75.2
AUR62037200 Chenopodium quinoa HOM05D003212 ORTHO05D003959 7.2e-54 214.9 153 75.2
Duzib268G1229 Durio zibethinus HOM05D003212 ORTHO05D003959 7.2e-54 214.9 147 74.1
Gohir.D13G149300 Gossypium hirsutum HOM05D003212 ORTHO05D003959 9.4e-54 214.5 147 75.5
Gohir.A04G028000 Gossypium hirsutum HOM05D003212 ORTHO05D003959 1.2e-53 214.2 146 74.0
Gorai.013G167000 Gossypium raimondii HOM05D003212 ORTHO05D003959 2.1e-53 213.4 147 75.5
Duzib213G0398 Durio zibethinus HOM05D003212 ORTHO05D003959 4.6e-53 212.2 146 74.0
HanXRQChr01g0008251 Helianthus annuus HOM05D003212 ORTHO05D003959 1.4e-52 210.7 150 72.7
Ciclev10004916m.g Citrus clementina HOM05D003212 ORTHO05D003959 5.1e-52 208.8 150 70.7
Peaxi162Scf00010g03311 Petunia axillaris HOM05D003212 ORTHO05D003959 8.8e-52 208.0 139 77.7
CDE08G1532 Ceratophyllum demersum HOM05D003212 ORTHO05D003959 2.0e-51 206.8 148 73.0
ATR0789G118 Amborella trichopoda HOM05D003212 ORTHO05D003959 3.3e-51 206.1 147 72.1
Aqoxy3G03071 Aquilegia oxysepala HOM05D003212 ORTHO05D003959 7.4e-51 204.9 141 74.5
CDE09G0923 Ceratophyllum demersum HOM05D003212 ORTHO05D003959 1.8e-49 200.3 148 71.6
Mapoly0052s0107 Marchantia polymorpha HOM05D003212 ORTHO05D003959 1.8e-49 200.3 151 66.2
SEGI_05174 Sequoiadendron giganteum HOM05D003212 ORTHO05D003959 1.2e-48 197.6 147 70.7
HPP92_003235 Vanilla planifolia HOM05D003212 ORTHO05D003959 1.2e-48 197.6 191 58.1
HPP92_003228 Vanilla planifolia HOM05D003212 ORTHO05D003959 2.6e-48 196.4 148 68.2
Pp3c3_16990 Physcomitrium patens HOM05D003212 ORTHO05D003959 1.0e-47 194.5 147 70.1
SMO259G0031 Selaginella moellendorffii HOM05D003212 ORTHO05D003959 8.5e-47 191.4 146 68.5
AagrBONN_evm.TU.Sc2ySwM_117.3888 Anthoceros agrestis HOM05D003212 ORTHO05D003959 1.6e-45 187.2 147 66.7
MCO07G762 Micromonas commoda HOM05D003212 ORTHO05D003959 6.1e-45 185.3 148 64.9
Pp3c13_16830 Physcomitrium patens HOM05D003212 ORTHO05D003959 2.0e-43 180.3 147 66.0
Os01g0951200 Oryza sativa ssp. japonica HOM05D003212 ORTHO05D003959 2.6e-43 179.9 146 64.4
Cre01.g048950 Chlamydomonas reinhardtii HOM05D003212 ORTHO05D003959 3.3e-43 179.5 156 61.5
SalBow5G1921 Salvia bowleyana HOM05D003212 ORTHO05D003959 2.8e-42 176.4 97 97.9
PRCOL_00000883 Prasinoderma coloniale HOM05D003212 ORTHO05D003959 3.7e-42 176.0 148 60.8
CBR_g41363 Chara braunii HOM05D003212 ORTHO05D003959 6.3e-42 175.3 154 61.7
SalBow5G3827 Salvia bowleyana HOM05D003212 ORTHO05D003959 4.1e-41 172.6 101 93.1
Os01g0951400 Oryza sativa ssp. japonica HOM05D003212 ORTHO05D003959 1.9e-38 163.7 147 57.1
BcaC02g12603 Brassica carinata HOM05D003212 ORTHO05D003959 7.2e-38 161.8 158 61.4
Nitab4.5_0001135g0170 Nicotiana tabacum HOM05D003212 ORTHO05D003959 9.4e-38 161.4 102 80.4
Zm00001eb140930 Zea mays HOM05D003212 ORTHO05D003959 1.5e-35 154.1 146 57.5
Zm00001eb140940 Zea mays HOM05D003212 ORTHO05D003959 1.7e-34 150.6 147 58.5
Cpa.g.sc223.9 Carica papaya HOM05D003212 ORTHO05D003959 2.6e-32 143.3 92 75.0
vmacro13746 Vaccinium macrocarpon HOM05D001576 ORTHO05D000401 1.2e-29 134.4 155 49.7
vmacro22863 Vaccinium macrocarpon HOM05D001576 ORTHO05D000401 1.2e-29 134.4 155 49.7
Migut.O00503 Erythranthe guttata HOM05D003212 ORTHO05D003959 5.2e-28 129.0 97 69.1
Glyma.15G237000 Glycine max HOM05D003212 ORTHO05D003959 2.6e-27 126.7 91 69.2
Rhsim07G0066400 Rhododendron simsii HOM05D001576 ORTHO05D000401 2.4e-25 120.2 156 41.7
RhsimUnG0111600 Rhododendron simsii HOM05D001576 ORTHO05D000401 2.4e-25 120.2 156 41.7
SMO181G0021 Selaginella moellendorffii HOM05D003212 ORTHO05D003959 6.5e-23 112.1 145 48.3
ECA232G0145 Erigeron canadensis HOM05D003212 ORTHO05D003959 2.5e-22 110.2 63 87.3
GSVIVG01000650001 Vitis vinifera HOM05D003212 ORTHO05D003959 9.4e-22 108.2 97 63.9
FAN03G0414 Fragaria x ananassa HOM05D003212 ORTHO05D003959 2.7e-21 106.7 97 58.8
AUR62003805 Chenopodium quinoa HOM05D003212 ORTHO05D003959 4.0e-20 102.8 63 82.5
Haze_03625 Corylus avellana HOM05D003212 ORTHO05D003959 3.4e-19 99.8 65 78.5
CAN.G919.25 Capsicum annuum HOM05D003212 ORTHO05D003959 8.3e-18 95.1 74 71.6
FvH4_4g15670 Fragaria vesca HOM05D013275 ORTHO05D003959 1.8e-17 94.0 84 61.9
MD17G1257300 Malus domestica HOM05D003212 ORTHO05D003959 3.1e-17 93.2 63 76.2
Ca_28375_v3 Cicer arietinum L. HOM05D003212 ORTHO05D003959 5.4e-17 92.4 63 71.4
Ca_30130_v3 Cicer arietinum L. HOM05D003212 ORTHO05D003959 5.4e-17 92.4 63 71.4
FvH4_3g03840 Fragaria vesca HOM05D013275 ORTHO05D015659 4.5e-16 89.4 64 71.9
HPP92_003227 Vanilla planifolia HOM05D003212 ORTHO05D003959 1.9e-14 84.0 73 63.0
Atru.chr12.1029 Acer truncatum HOM05D003212 ORTHO05D003959 2.5e-14 83.6 62 66.1
RcHm_v2.0_Chr5g0023651 Rosa chinensis HOM05D003212 ORTHO05D015659 2.3e-12 77.0 46 84.8
RcHm_v2.0_Chr4g0435201 Rosa chinensis HOM05D003212 ORTHO05D015659 6.8e-12 75.5 46 82.6
AUR62003806 Chenopodium quinoa HOM05D003212 ORTHO05D003959 8.3e-10 68.6 45 73.3
Pp3s46_240 Physcomitrium patens HOM05D003658 ORTHO05D004457 1.1e-09 68.2 127 32.3
MD17G1257400 Malus domestica HOM05D003212 ORTHO05D003959 9.2e-09 65.1 54 70.4
SMO250G0012 Selaginella moellendorffii HOM05D000515 ORTHO05D001911 2.7e-08 63.5 63 47.6
SMO259G0030 Selaginella moellendorffii HOM05D000515 ORTHO05D001911 1.0e-07 61.6 63 46.0


User provided reference genes

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