Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow5G4118 Salvia bowleyana HOM05D003533 ORTHO05D004009 8.3e-21 102.8 54 100.0
Migut.I00058 Erythranthe guttata HOM05D003533 ORTHO05D004009 1.1e-12 75.9 55 80.0
unitig_62.g23572 Utricularia gibba HOM05D006519 ORTHO05D008306 3.2e-12 74.3 59 72.9
Oeu005054.1 Olea europaea HOM05D003533 ORTHO05D004009 7.0e-12 73.2 60 70.0
Oeu005690.1 Olea europaea HOM05D003533 ORTHO05D004009 3.5e-11 70.9 60 66.7
TAR629G1875 Trochodendron aralioides HOM05D003533 ORTHO05D004009 2.3e-10 68.2 57 70.2
Aqoxy3G03117 Aquilegia oxysepala HOM05D003533 ORTHO05D004009 6.6e-10 66.6 46 67.4
TAR622G1413 Trochodendron aralioides HOM05D003533 ORTHO05D004009 9.5e-09 62.8 56 57.1
CANSAT54G2961 Cannabis sativa HOM05D003533 ORTHO05D004009 2.1e-08 61.6 50 66.0
Duzib084G0973 Durio zibethinus HOM05D003533 ORTHO05D004009 2.8e-08 61.2 56 64.3
Lsat_1_v5_gn_1_12101 Lactuca sativa HOM05D003533 ORTHO05D004009 2.8e-08 61.2 51 66.7
CSS0013527 Camellia sinensis var. sinensis HOM05D003533 ORTHO05D004009 3.6e-08 60.8 58 62.1
CSS0016862 Camellia sinensis var. sinensis HOM05D003533 ORTHO05D004009 3.6e-08 60.8 58 62.1
QL10p012332 Quercus lobata HOM05D003533 ORTHO05D004009 4.7e-08 60.5 53 60.4
Sopen03g032860 Solanum pennellii HOM05D003533 ORTHO05D004009 4.7e-08 60.5 55 60.0
Nitab4.5_0003386g0040 Nicotiana tabacum HOM05D003533 ORTHO05D004009 6.1e-08 60.1 51 60.8
Solyc03g113810.1 Solanum lycopersicum HOM05D003533 ORTHO05D004009 6.1e-08 60.1 55 60.0
TWI81G0654 Tripterygium wilfordii HOM05D003533 ORTHO05D004009 6.1e-08 60.1 54 64.8
TWI15G0955 Tripterygium wilfordii HOM05D003533 ORTHO05D004009 1.0e-07 59.3 56 58.9
QL03p067197 Quercus lobata HOM05D003533 ORTHO05D004009 1.8e-07 58.5 56 57.1
COL.COLO4_21432 Corchorus olitorius HOM05D003533 ORTHO05D004009 2.3e-07 58.2 54 61.1
ECA247G1125 Erigeron canadensis HOM05D003533 ORTHO05D004009 2.3e-07 58.2 52 57.7
CiPaw.06G076000 Carya illinoinensis HOM05D003533 ORTHO05D004009 4.0e-07 57.4 60 55.0
CiPaw.06G076100 Carya illinoinensis HOM05D003533 ORTHO05D004009 4.0e-07 57.4 60 55.0
CiPaw.06G076200 Carya illinoinensis HOM05D003533 ORTHO05D004009 4.0e-07 57.4 60 55.0
Manes.14G070400 Manihot esculenta HOM05D003533 ORTHO05D004009 4.0e-07 57.4 54 57.4
PSO013G0048 Papaver somniferum HOM05D003533 ORTHO05D004009 4.0e-07 57.4 53 62.3
Rhsim12G0161500 Rhododendron simsii HOM05D003533 ORTHO05D004009 4.0e-07 57.4 54 57.4
Thecc.03G004000 Theobroma cacao HOM05D003533 ORTHO05D004009 4.0e-07 57.4 53 60.4
Thecc.03G004200 Theobroma cacao HOM05D003533 ORTHO05D004009 4.0e-07 57.4 53 60.4
Aa31LG4G16780 Aethionema arabicum HOM05D003533 ORTHO05D004009 6.8e-07 56.6 48 60.4
Hma1.2p1_0002F.1_g002860 Hydrangea macrophylla HOM05D003533 ORTHO05D004009 6.8e-07 56.6 53 62.3
vmacro16587 Vaccinium macrocarpon HOM05D003533 ORTHO05D004009 6.8e-07 56.6 52 57.7
Actinidia19080 Actinidia chinensis HOM05D003533 ORTHO05D004009 8.9e-07 56.2 49 61.2
MELO3C017124.2 Cucumis melo HOM05D003533 ORTHO05D004009 8.9e-07 56.2 58 62.1
Glyma.04G178500 Glycine max HOM05D003533 ORTHO05D004009 8.9e-07 56.2 34 76.5
HanXRQChr09g0237871 Helianthus annuus HOM05D003533 ORTHO05D004009 8.9e-07 56.2 52 61.5
Sed0002579 Sechium edule HOM05D003533 ORTHO05D004009 1.2e-06 55.8 51 56.9
Sc04g0002090 Simmondsia chinensis HOM05D003533 ORTHO05D004009 1.2e-06 55.8 44 61.4
PGSC0003DMG400024583 Solanum tuberosum HOM05D003533 ORTHO05D004009 1.2e-06 55.8 55 58.2
CiPaw.06G076300 Carya illinoinensis HOM05D003533 ORTHO05D004009 1.5e-06 55.5 60 53.3
CDE07G1253 Ceratophyllum demersum HOM05D000502 ORTHO05D000356 1.5e-06 55.5 53 62.3
Hma1.2p1_0160F.1_g070540 Hydrangea macrophylla HOM05D003533 ORTHO05D004009 1.5e-06 55.5 54 57.4
FAN13G2147 Fragaria x ananassa HOM05D003533 ORTHO05D004009 2.6e-06 54.7 54 59.3
Manes.06G100300 Manihot esculenta HOM05D003533 ORTHO05D004009 3.4e-06 54.3 50 58.0
Glyma.17G093500 Glycine max HOM05D003533 ORTHO05D004009 4.4e-06 53.9 53 54.7
CiPaw.12G022900 Carya illinoinensis HOM05D003533 ORTHO05D004009 5.8e-06 53.5 46 63.0
Eucgr.B00337 Eucalyptus grandis HOM05D003533 ORTHO05D004009 5.8e-06 53.5 54 63.0
FAN18G0586 Fragaria x ananassa HOM05D003533 ORTHO05D004009 5.8e-06 53.5 51 58.8
Phvul.009G182200 Phaseolus vulgaris HOM05D003533 ORTHO05D004009 5.8e-06 53.5 50 62.0
Psat0s489g0040 Pisum sativum HOM05D003533 ORTHO05D004009 5.8e-06 53.5 34 73.5
Eucgr.K02881 Eucalyptus grandis HOM05D003533 ORTHO05D004009 7.5e-06 53.1 44 61.4
MD14G1187200 Malus domestica HOM05D003533 ORTHO05D004009 7.5e-06 53.1 56 57.1
Oeu017591.1 Olea europaea HOM05D003533 ORTHO05D004009 7.5e-06 53.1 51 52.9
Lsat_1_v5_gn_1_11280 Lactuca sativa HOM05D003533 ORTHO05D004009 9.8e-06 52.8 54 53.7
Lj1g0014022 Lotus japonicus HOM05D003533 ORTHO05D004009 9.8e-06 52.8 50 62.0
PSO013G0065 Papaver somniferum HOM05D003533 ORTHO05D004009 9.8e-06 52.8 49 55.1


User provided reference genes

Program Settings