Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow5G4116 Salvia bowleyana HOM05D002307 ORTHO05D002378 1.8e-75 285.8 141 100.0
SalBow3G2516 Salvia bowleyana HOM05D002307 ORTHO05D002378 1.3e-17 93.6 95 56.8
SGA_v2.0_scaffold357G49819 Striga asiatica HOM05D002307 ORTHO05D002378 1.3e-12 77.0 98 42.9
Oeu007740.1 Olea europaea HOM05D002307 ORTHO05D002378 2.4e-11 72.8 105 43.8
MSTRG.21090 Avicennia marina HOM05D002307 ORTHO05D002378 1.0e-09 67.4 107 42.1
Dinv16216 Davidia involucrata HOM05D002307 ORTHO05D002378 2.9e-09 65.9 105 39.0
Oeu040436.1 Olea europaea HOM05D002307 ORTHO05D002378 1.1e-08 63.9 96 40.6
MELO3C026948.2 Cucumis melo HOM05D002307 ORTHO05D002378 2.5e-08 62.8 94 35.1
Dinv29374 Davidia involucrata HOM05D002307 ORTHO05D002378 2.5e-08 62.8 106 43.4
CiPaw.13G123300 Carya illinoinensis HOM05D002307 ORTHO05D002378 3.2e-08 62.4 101 39.6
MSTRG.17762 Avicennia marina HOM05D002307 ORTHO05D002378 7.2e-08 61.2 108 38.9
CiPaw.14G088400 Carya illinoinensis HOM05D002307 ORTHO05D002378 9.4e-08 60.8 101 38.6
TAR623G0873 Trochodendron aralioides HOM05D002307 ORTHO05D002378 9.4e-08 60.8 95 37.9
SalBow6G7212 Salvia bowleyana HOM05D002307 ORTHO05D002378 1.2e-07 60.5 104 37.5
DCAR_018769 Daucus carota HOM05D002307 ORTHO05D002378 1.6e-07 60.1 114 37.7
Sed0019561 Sechium edule HOM05D002307 ORTHO05D002378 1.6e-07 60.1 95 36.8
Glyma.13G322300 Glycine max HOM05D002307 ORTHO05D002378 2.1e-07 59.7 105 36.2
Potri.009G006000 Populus trichocarpa HOM05D002307 ORTHO05D002378 2.1e-07 59.7 103 39.8
MELO3C004975.2 Cucumis melo HOM05D002307 ORTHO05D002378 3.6e-07 58.9 91 39.6
Sabra04G0146700 Salix brachista HOM05D002307 ORTHO05D002378 3.6e-07 58.9 101 39.6
Cc01_g10350 Coffea canephora HOM05D002307 ORTHO05D002378 4.7e-07 58.5 114 39.5
Glyma.12G178200 Glycine max HOM05D002307 ORTHO05D002378 4.7e-07 58.5 105 38.1
Peaxi162Scf01492g00002 Petunia axillaris HOM05D002307 ORTHO05D002378 4.7e-07 58.5 107 39.3
Potri.004G216100 Populus trichocarpa HOM05D002307 ORTHO05D002378 4.7e-07 58.5 102 39.2
CsaV3_1G013310 Cucumis sativus L. HOM05D002307 ORTHO05D002378 6.1e-07 58.2 91 39.6
CsaV3_6G014310 Cucumis sativus L. HOM05D002307 ORTHO05D002378 8.0e-07 57.8 96 34.4
QL01p015252 Quercus lobata HOM05D002307 ORTHO05D002378 1.0e-06 57.4 98 38.8
SGA_v2.0_scaffold45G16970 Striga asiatica HOM05D002307 ORTHO05D002378 1.0e-06 57.4 83 38.6
GSVIVG01031471001 Vitis vinifera HOM05D002307 ORTHO05D002378 1.0e-06 57.4 95 38.9
DCAR_015508 Daucus carota HOM05D002307 ORTHO05D002378 1.4e-06 57.0 110 37.3
Lalb_Chr19g0136951 Lupinus albus HOM05D002307 ORTHO05D002378 1.4e-06 57.0 94 37.2
FAN11G1454 Fragaria x ananassa HOM05D002307 ORTHO05D002378 2.3e-06 56.2 100 38.0
MD03G1126900 Malus domestica HOM05D002307 ORTHO05D002378 2.3e-06 56.2 107 37.4
Sabra09G0003300 Salix brachista HOM05D002307 ORTHO05D002378 2.3e-06 56.2 96 38.5
Actinidia07182 Actinidia chinensis HOM05D002307 ORTHO05D002378 3.0e-06 55.8 102 38.2
Cc02_g10710 Coffea canephora HOM05D002307 ORTHO05D002378 3.0e-06 55.8 103 37.9
TPR.G36830 Trifolium pratense HOM05D002307 ORTHO05D002378 3.0e-06 55.8 108 37.0
arahy.Tifrunner.gnm1.ann1.WVT6Y2 Arachis hypogaea HOM05D002307 ORTHO05D002378 4.0e-06 55.5 100 37.0
Duzib150G0400 Durio zibethinus HOM05D002307 ORTHO05D002378 4.0e-06 55.5 96 36.5
Duzib168G0159 Durio zibethinus HOM05D002307 ORTHO05D002378 4.0e-06 55.5 95 36.8
Actinidia24143 Actinidia chinensis HOM05D002307 ORTHO05D002378 5.2e-06 55.1 101 38.6
COL.COLO4_11105 Corchorus olitorius HOM05D002307 ORTHO05D002378 6.7e-06 54.7 95 34.7
Eucgr.B03932 Eucalyptus grandis HOM05D002307 ORTHO05D002378 6.7e-06 54.7 94 35.1
Rhsim13G0100200 Rhododendron simsii HOM05D002307 ORTHO05D002378 6.7e-06 54.7 109 39.4
arahy.Tifrunner.gnm1.ann1.Z34153 Arachis hypogaea HOM05D002307 ORTHO05D002378 8.8e-06 54.3 100 36.0
CSS0044285 Camellia sinensis var. sinensis HOM05D002307 ORTHO05D002378 8.8e-06 54.3 126 33.3
ClCG03G002600 Citrullus lanatus HOM05D002307 ORTHO05D002378 8.8e-06 54.3 95 37.9
Migut.N02547 Erythranthe guttata HOM05D002307 ORTHO05D002378 8.8e-06 54.3 97 36.1
FvH4_3g30750 Fragaria vesca HOM05D002307 ORTHO05D002378 8.8e-06 54.3 101 36.6
FAN16G1458 Fragaria x ananassa HOM05D002307 ORTHO05D002378 8.8e-06 54.3 102 35.3
PSO063G4804 Papaver somniferum HOM05D002307 ORTHO05D002378 8.8e-06 54.3 104 36.5
Phvul.011G085800 Phaseolus vulgaris HOM05D002307 ORTHO05D002378 8.8e-06 54.3 113 34.5
RcHm_v2.0_Chr5g0056941 Rosa chinensis HOM05D002307 ORTHO05D002378 8.8e-06 54.3 97 36.1


User provided reference genes

Program Settings