Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow5G3371 Salvia bowleyana HOM05D006965 ORTHO05D008652 5.0e-207 724.2 358 100.0
MSTRG.17063 Avicennia marina HOM05D006965 ORTHO05D008652 2.5e-134 482.6 330 72.7
Migut.B01364 Erythranthe guttata HOM05D006965 ORTHO05D008652 2.9e-130 469.2 328 71.0
SGA_v2.0_scaffold5G03114 Striga asiatica HOM05D006965 ORTHO05D008652 3.8e-122 442.2 325 68.0
Ciclev10031978m.g Citrus clementina HOM05D006965 ORTHO05D008652 9.1e-116 421.0 323 62.5
Actinidia32338 Actinidia chinensis HOM05D006965 ORTHO05D008652 3.5e-115 419.1 326 62.6
QL04p003153 Quercus lobata HOM05D006965 ORTHO05D008652 7.7e-115 417.9 322 63.4
Solyc01g073930.3 Solanum lycopersicum HOM05D006965 ORTHO05D008652 1.0e-114 417.5 325 62.2
PGSC0003DMG400006312 Solanum tuberosum HOM05D006965 ORTHO05D008652 1.3e-114 417.2 325 61.8
GSVIVG01001368001 Vitis vinifera HOM05D006965 ORTHO05D008652 1.7e-114 416.8 318 64.8
Thecc.01G416200 Theobroma cacao HOM05D006965 ORTHO05D008652 1.5e-113 413.7 337 60.5
QL04p000072 Quercus lobata HOM05D006965 ORTHO05D008652 2.5e-113 412.9 320 62.5
CSS0026631 Camellia sinensis var. sinensis HOM05D006965 ORTHO05D008652 3.2e-113 412.5 322 62.1
Sopen01g033500 Solanum pennellii HOM05D006965 ORTHO05D008652 4.2e-113 412.1 325 60.9
Nitab4.5_0000892g0120 Nicotiana tabacum HOM05D006965 ORTHO05D008652 9.4e-113 411.0 320 62.2
Nitab4.5_0004592g0020 Nicotiana tabacum HOM05D006965 ORTHO05D008652 2.1e-112 409.8 332 59.9
Lj3g0017203 Lotus japonicus HOM05D006965 ORTHO05D008652 3.6e-112 409.1 331 60.4
CAN.G261.10 Capsicum annuum HOM05D006965 ORTHO05D008652 4.7e-112 408.7 332 60.2
QL04p003146 Quercus lobata HOM05D006965 ORTHO05D008652 1.4e-111 407.1 322 62.4
Rhsim07G0050600 Rhododendron simsii HOM05D006965 ORTHO05D008652 4.0e-111 405.6 338 57.7
Cfa004805 Carpinus fangiana HOM05D006965 ORTHO05D008652 6.7e-111 404.8 326 62.0
TAR633G1267 Trochodendron aralioides HOM05D006965 ORTHO05D008652 6.7e-111 404.8 327 62.1
vmacro13617 Vaccinium macrocarpon HOM05D006965 ORTHO05D008652 6.7e-111 404.8 327 60.2
Manes.10G151000 Manihot esculenta HOM05D006965 ORTHO05D008652 1.5e-110 403.7 322 60.6
Haze_10398 Corylus avellana HOM05D006965 ORTHO05D008652 2.0e-110 403.3 328 60.7
Cc02_g27080 Coffea canephora HOM05D006965 ORTHO05D008652 4.4e-110 402.1 324 60.5
Haze_10419 Corylus avellana HOM05D006965 ORTHO05D008652 5.7e-110 401.7 328 61.0
Haze_10424 Corylus avellana HOM05D006965 ORTHO05D008652 5.7e-110 401.7 328 61.0
Atru.chr11.2694 Acer truncatum HOM05D006965 ORTHO05D008652 3.7e-109 399.1 330 58.5
Nn2g15664 Nelumbo nucifera HOM05D006965 ORTHO05D008652 4.8e-109 398.7 338 59.2
ECA248G1794 Erigeron canadensis HOM05D006965 ORTHO05D008652 2.4e-108 396.4 331 58.9
Gohir.A08G026760 Gossypium hirsutum HOM05D006965 ORTHO05D008652 2.4e-108 396.4 320 60.0
CiPaw.13G000900 Carya illinoinensis HOM05D006965 ORTHO05D008652 4.1e-108 395.6 326 60.1
Sc12g0002350 Simmondsia chinensis HOM05D006965 ORTHO05D008652 5.3e-108 395.2 328 58.5
THA.LOC104827577 Tarenaya hassleriana HOM05D006965 ORTHO05D008652 5.3e-108 395.2 330 58.2
Gohir.D08G037500 Gossypium hirsutum HOM05D006965 ORTHO05D008652 7.0e-108 394.8 320 59.7
MD02G1318500 Malus domestica HOM05D006965 ORTHO05D008652 9.1e-108 394.4 326 58.3
MD07G1002700 Malus domestica HOM05D006965 ORTHO05D008652 9.1e-108 394.4 340 57.1
Gorai.004G035500 Gossypium raimondii HOM05D006965 ORTHO05D008652 1.2e-107 394.0 320 59.7
Sabra09G0014600 Salix brachista HOM05D006965 ORTHO05D008652 1.3e-106 390.6 318 59.4
Lalb_Chr25g0283521 Lupinus albus HOM05D006965 ORTHO05D008652 1.7e-106 390.2 323 57.0
PSO339G5860 Papaver somniferum HOM05D006965 ORTHO05D008652 5.0e-106 388.7 327 57.8
TWI73G0408 Tripterygium wilfordii HOM05D006965 ORTHO05D008652 6.5e-106 388.3 330 59.1
BcaB02g08813 Brassica carinata HOM05D006965 ORTHO05D008652 1.5e-105 387.1 328 54.9
TPR.G11733 Trifolium pratense HOM05D006965 ORTHO05D008652 1.5e-105 387.1 330 58.2
Phvul.005G039600 Phaseolus vulgaris HOM05D006965 ORTHO05D008652 1.9e-105 386.7 331 57.1
Potri.009G023200 Populus trichocarpa HOM05D006965 ORTHO05D008652 2.5e-105 386.3 323 57.6
CsaV3_3G032450 Cucumis sativus L. HOM05D006965 ORTHO05D008652 4.2e-105 385.6 336 57.1
PSO384G4145 Papaver somniferum HOM05D006965 ORTHO05D008652 9.4e-105 384.4 327 57.8
AL4G43420 Arabidopsis lyrata HOM05D006965 ORTHO05D008652 2.1e-104 383.3 330 55.5
Medtr2g060820 Medicago truncatula HOM05D006965 ORTHO05D008652 2.1e-104 383.3 323 57.9
Glyma.08G149400 Glycine max HOM05D006965 ORTHO05D008652 4.7e-104 382.1 336 56.2
A05p04570 Brassica napus HOM05D006965 ORTHO05D008652 1.0e-103 380.9 330 54.5
Ca_02931_v3 Cicer arietinum L. HOM05D006965 ORTHO05D008652 1.0e-103 380.9 329 57.8
BraA05t19431Z Brassica rapa HOM05D006965 ORTHO05D008652 1.8e-103 380.2 330 54.8
ClCG10G012640 Citrullus lanatus HOM05D006965 ORTHO05D008652 1.8e-103 380.2 344 55.8
MBI04_g33895_MAGBIO Magnolia biondii HOM05D006965 ORTHO05D008652 3.0e-103 379.4 339 56.0
VMungo1080G1640 Vigna mungo HOM05D006965 ORTHO05D008652 3.0e-103 379.4 328 56.1
BcaC02g12316 Brassica carinata HOM05D006965 ORTHO05D008652 6.8e-103 378.3 328 53.7
C04p05300 Brassica napus HOM05D006965 ORTHO05D008652 6.8e-103 378.3 328 53.7
FAN01G2144 Fragaria x ananassa HOM05D006965 ORTHO05D008652 6.8e-103 378.3 330 57.3
Psat1g128200 Pisum sativum HOM05D006965 ORTHO05D008652 8.8e-103 377.9 327 57.5
RcHm_v2.0_Chr1g0313421 Rosa chinensis HOM05D006965 ORTHO05D008652 8.8e-103 377.9 330 57.3
Carub.0004s2700 Capsella rubella HOM05D006965 ORTHO05D008652 1.3e-101 374.0 330 54.5
CANSAT78G1981 Cannabis sativa HOM05D006965 ORTHO05D008652 1.4e-100 370.5 335 57.0
FvH4_7g00170 Fragaria vesca HOM05D006965 ORTHO05D008652 1.4e-100 370.5 348 54.6
Sed0016917 Sechium edule HOM05D006965 ORTHO05D008652 1.4e-100 370.5 328 57.0
Eucgr.G02572 Eucalyptus grandis HOM05D006965 ORTHO05D008652 5.4e-100 368.6 326 54.9
unitig_26.g9594 Utricularia gibba HOM05D001227 ORTHO05D001082 2.0e-99 366.7 327 59.9
Aa31LG1G25970 Aethionema arabicum HOM05D006965 ORTHO05D008652 2.7e-99 366.3 326 52.1
BolC4t22170H Brassica oleracea HOM05D006965 ORTHO05D008652 5.9e-99 365.2 352 50.0
TAR362G1148 Trochodendron aralioides HOM05D006965 ORTHO05D008652 5.9e-99 365.2 306 62.1
AUR62012162 Chenopodium quinoa HOM05D006965 ORTHO05D008652 7.7e-99 364.8 323 55.7
MELO3C023943.2 Cucumis melo HOM05D006965 ORTHO05D008652 7.7e-99 364.8 334 54.8
Aqoxy1G00028 Aquilegia oxysepala HOM05D006965 ORTHO05D008652 1.0e-98 364.4 316 55.4
Thhalv10001527m.g Eutrema salsugineum HOM05D006965 ORTHO05D008652 3.8e-98 362.5 330 52.4
Sp4g26490 Schrenkiella parvula HOM05D006965 ORTHO05D008652 1.1e-97 360.9 330 52.4
Hund16040 Selenicereus undatus HOM05D006965 ORTHO05D008652 2.8e-96 356.3 325 55.4
Prupe.2G004200 Prunus persica HOM05D006965 ORTHO05D008652 4.7e-96 355.5 273 62.3
AT2G44420 Arabidopsis thaliana HOM05D006965 ORTHO05D008652 4.0e-95 352.4 360 49.4
FAN06G0111 Fragaria x ananassa HOM05D006965 ORTHO05D008652 8.9e-95 351.3 332 54.8
HanXRQChr01g0018681 Helianthus annuus HOM05D006965 ORTHO05D008652 2.0e-94 350.1 322 54.7
PGR004G0492 Punica granatum HOM05D006965 ORTHO05D008652 2.0e-94 350.1 308 59.1
FAN10G4273 Fragaria x ananassa HOM05D006965 ORTHO05D008652 3.4e-94 349.4 346 53.2
AUR62022798 Chenopodium quinoa HOM05D006965 ORTHO05D008652 9.8e-94 347.8 325 53.8
Hma1.2p1_2998F.1_g331493 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 9.8e-94 347.8 258 66.3
Dinv43490 Davidia involucrata HOM05D006965 ORTHO05D008652 3.1e-92 342.8 252 66.7
Hma1.2p1_2998F.1_g331496 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 7.0e-92 341.7 250 67.2
Os06g0618150 Oryza sativa ssp. japonica HOM05D006965 ORTHO05D008652 1.3e-90 337.4 326 51.2
FAN01G0465 Fragaria x ananassa HOM05D006965 ORTHO05D008652 3.3e-89 332.8 347 50.4
Zm00001eb275720 Zea mays HOM05D006965 ORTHO05D008652 7.3e-89 331.6 320 50.9
ATR0605G047 Amborella trichopoda HOM05D006965 ORTHO05D008652 4.4e-86 322.4 323 48.9
EL10Ac2g04673 Beta vulgaris HOM05D006965 ORTHO05D008652 7.0e-84 315.1 293 54.9
Lsat_1_v5_gn_1_110081 Lactuca sativa HOM05D006965 ORTHO05D008652 4.6e-83 312.4 279 57.0
Peaxi162Scf00878g00321 Petunia axillaris HOM05D006965 ORTHO05D008652 2.9e-77 293.1 265 57.7
Ah.16g102760 Amaranthus hybridus HOM05D006965 ORTHO05D008652 2.4e-76 290.0 326 46.6
FAN03G0167 Fragaria x ananassa HOM05D006965 ORTHO05D008652 7.3e-73 278.5 281 53.7
Duzib114G0529 Durio zibethinus HOM05D006965 ORTHO05D008652 1.2e-72 277.7 332 44.9
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 3.1e-71 273.1 245 58.0
CDE05G0249 Ceratophyllum demersum HOM05D006965 ORTHO05D008652 5.2e-71 272.3 262 52.3
HPP92_002651 Vanilla planifolia HOM05D006965 ORTHO05D008652 1.3e-66 257.7 234 52.1
DCAR_029603 Daucus carota HOM05D006965 ORTHO05D008652 4.4e-62 242.7 319 45.5
CARHR139580 Cardamine hirsuta HOM05D006965 ORTHO05D008652 1.2e-59 234.6 183 56.3
Cfa022003 Carpinus fangiana HOM05D006965 ORTHO05D008652 1.0e-58 231.5 189 60.3
Mapoly0087s0073 Marchantia polymorpha HOM05D006965 ORTHO05D008652 1.5e-57 227.6 327 38.2
arahy.Tifrunner.gnm1.ann1.Z1UMC7 Arachis hypogaea HOM05D006965 ORTHO05D008652 3.5e-51 206.5 195 54.4
arahy.Tifrunner.gnm1.ann1.ZJD8NP Arachis hypogaea HOM05D006965 ORTHO05D008652 2.0e-46 190.7 223 47.1
Eucgr.L03457 Eucalyptus grandis HOM05D006965 ORTHO05D008652 7.9e-43 178.7 128 57.8
SMO132G0001 Selaginella moellendorffii HOM05D006965 ORTHO05D008652 3.8e-37 159.8 328 36.3
Oeu009369.1 Olea europaea HOM05D006965 ORTHO05D008652 5.5e-36 156.0 144 52.8
SEGI_12556 Sequoiadendron giganteum HOM05D006965 ORTHO05D008652 9.3e-36 155.2 124 55.6
Haze_10414 Corylus avellana HOM05D006965 ORTHO05D008652 3.1e-31 140.2 99 63.6
SMO147G0191 Selaginella moellendorffii HOM05D020017 ORTHO05D022314 1.4e-28 131.3 190 42.1
Cpa.g.sc189.20 Carica papaya HOM05D006965 ORTHO05D008652 4.8e-16 89.7 71 54.9
TPR.G14363 Trifolium pratense HOM05D006965 ORTHO05D008652 3.4e-14 83.6 104 46.2
Cpa.g.sc189.19 Carica papaya HOM05D006965 ORTHO05D008652 2.0e-09 67.8 85 47.1


User provided reference genes

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