Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow5G3336 Salvia bowleyana HOM05D003385 ORTHO05D003844 3.3e-22 107.5 53 100.0
Manes.02G038600 Manihot esculenta HOM05D003385 ORTHO05D003844 7.9e-08 59.7 52 53.8
SalBow2G2468 Salvia bowleyana HOM05D003385 ORTHO05D003844 7.9e-08 59.7 52 57.7
Sc01g0008530 Simmondsia chinensis HOM05D003385 ORTHO05D003844 1.0e-07 59.3 52 51.9
THA.LOC109116621 Tarenaya hassleriana HOM05D003385 ORTHO05D003844 1.3e-07 58.9 52 51.9
CSS0016808 Camellia sinensis var. sinensis HOM05D003385 ORTHO05D003844 1.8e-07 58.5 52 50.0
COL.COLO4_12504 Corchorus olitorius HOM05D003385 ORTHO05D003844 2.3e-07 58.2 49 59.2
Duzib138G0675 Durio zibethinus HOM05D003385 ORTHO05D003844 2.3e-07 58.2 49 55.1
Lsat_1_v5_gn_6_3121 Lactuca sativa HOM05D003385 ORTHO05D003844 2.3e-07 58.2 51 54.9
Thecc.01G381400 Theobroma cacao HOM05D003385 ORTHO05D003844 2.3e-07 58.2 51 52.9
Nn6g33988 Nelumbo nucifera HOM05D003385 ORTHO05D003844 3.0e-07 57.8 52 53.8
QL12p012571 Quercus lobata HOM05D003385 ORTHO05D003844 3.0e-07 57.8 52 51.9
AT2G35736 Arabidopsis thaliana HOM05D003385 ORTHO05D003844 3.9e-07 57.4 52 51.9
CSS0009843 Camellia sinensis var. sinensis HOM05D003385 ORTHO05D003844 3.9e-07 57.4 52 50.0
MELO3C007606.2 Cucumis melo HOM05D003385 ORTHO05D003844 3.9e-07 57.4 52 48.1
Potri.001G123000 Populus trichocarpa HOM05D003385 ORTHO05D003844 3.9e-07 57.4 52 53.8
Manes.01G079400 Manihot esculenta HOM05D003385 ORTHO05D003844 6.7e-07 56.6 52 50.0
Prupe.5G072000 Prunus persica HOM05D003385 ORTHO05D003844 6.7e-07 56.6 52 50.0
Cfa011180 Carpinus fangiana HOM05D003385 ORTHO05D003844 8.7e-07 56.2 51 52.9
ClCG01G017280 Citrullus lanatus HOM05D003385 ORTHO05D003844 8.7e-07 56.2 52 48.1
Migut.A00964 Erythranthe guttata HOM05D003385 ORTHO05D003844 8.7e-07 56.2 52 51.9
Nn1g01044 Nelumbo nucifera HOM05D003385 ORTHO05D003844 8.7e-07 56.2 52 51.9
Nitab4.5_0012281g0010 Nicotiana tabacum HOM05D003385 ORTHO05D003844 8.7e-07 56.2 51 51.0
Cfa011178 Carpinus fangiana HOM05D003385 ORTHO05D003844 1.1e-06 55.8 51 54.9
MD06G1061000 Malus domestica HOM05D003385 ORTHO05D003844 1.1e-06 55.8 52 51.9
Sed0003372 Sechium edule HOM05D003385 ORTHO05D003844 1.5e-06 55.5 52 50.0
SEGI_20473 Sequoiadendron giganteum HOM05D003385 ORTHO05D003844 1.5e-06 55.5 52 50.0
Mapoly0083s0036 Marchantia polymorpha HOM05D003385 ORTHO05D003844 1.9e-06 55.1 49 53.1
Peaxi162Scf00002g01611 Petunia axillaris HOM05D003385 ORTHO05D003844 1.9e-06 55.1 52 48.1
Thecc.03G156100 Theobroma cacao HOM05D003385 ORTHO05D003844 1.9e-06 55.1 51 51.0
Atru.chr9.1329 Acer truncatum HOM05D003385 ORTHO05D003844 2.5e-06 54.7 52 50.0
AagrBONN_evm.TU.Sc2ySwM_368.2415 Anthoceros agrestis HOM05D003385 ORTHO05D003844 2.5e-06 54.7 52 46.2
AL4G31830 Arabidopsis lyrata HOM05D003385 ORTHO05D003844 2.5e-06 54.7 52 50.0
Cc08_g12660 Coffea canephora HOM05D003385 ORTHO05D003844 2.5e-06 54.7 51 51.0
Migut.B01603 Erythranthe guttata HOM05D003385 ORTHO05D003844 2.5e-06 54.7 49 55.1
HanXRQChr06g0164351 Helianthus annuus HOM05D003385 ORTHO05D003844 2.5e-06 54.7 51 49.0
Carub.0004s1747 Capsella rubella HOM05D003385 ORTHO05D003844 3.3e-06 54.3 52 50.0
PSO675G2010 Papaver somniferum HOM05D003385 ORTHO05D003844 3.3e-06 54.3 52 50.0
CiPaw.11G152800 Carya illinoinensis HOM05D003385 ORTHO05D003844 4.3e-06 53.9 52 48.1
Gohir.A11G079000 Gossypium hirsutum HOM05D003385 ORTHO05D003844 4.3e-06 53.9 49 49.0
Gohir.D11G083700 Gossypium hirsutum HOM05D003385 ORTHO05D003844 4.3e-06 53.9 49 49.0
Gorai.007G089200 Gossypium raimondii HOM05D003385 ORTHO05D003844 4.3e-06 53.9 49 49.0
PGR042G2744 Punica granatum HOM05D003385 ORTHO05D003844 4.3e-06 53.9 51 51.0
CSS0014285 Camellia sinensis var. sinensis HOM05D003385 ORTHO05D003844 5.6e-06 53.5 47 48.9
Duzib068G0982 Durio zibethinus HOM05D003385 ORTHO05D003844 5.6e-06 53.5 51 49.0
Eucgr.E00434 Eucalyptus grandis HOM05D003385 ORTHO05D003844 5.6e-06 53.5 52 46.2
Glyma.07G022200 Glycine max HOM05D003385 ORTHO05D003844 5.6e-06 53.5 52 48.1
Gohir.A12G198600 Gossypium hirsutum HOM05D003385 ORTHO05D003844 5.6e-06 53.5 51 49.0
Gohir.D12G201300 Gossypium hirsutum HOM05D003385 ORTHO05D003844 5.6e-06 53.5 51 49.0
Gorai.008G216400 Gossypium raimondii HOM05D003385 ORTHO05D003844 5.6e-06 53.5 51 49.0
Rhsim09G0191500 Rhododendron simsii HOM05D003385 ORTHO05D003844 5.6e-06 53.5 46 50.0
Sed0011687 Sechium edule HOM05D003385 ORTHO05D003844 5.6e-06 53.5 52 48.1
CANSAT56G4393 Cannabis sativa HOM05D003385 ORTHO05D003844 7.4e-06 53.1 52 51.9
CiPaw.13G033300 Carya illinoinensis HOM05D003385 ORTHO05D003844 7.4e-06 53.1 51 47.1
COL.COLO4_14125 Corchorus olitorius HOM05D003385 ORTHO05D003844 7.4e-06 53.1 51 49.0
Haze_02669 Corylus avellana HOM05D003385 ORTHO05D003844 7.4e-06 53.1 49 51.0
DCAR_008484 Daucus carota HOM05D003385 ORTHO05D003844 7.4e-06 53.1 52 48.1
HanXRQChr13g0396331 Helianthus annuus HOM05D003385 ORTHO05D003844 7.4e-06 53.1 51 47.1
Oeu015324.1 Olea europaea HOM05D003385 ORTHO05D003844 7.4e-06 53.1 52 48.1
CARHR129980 Cardamine hirsuta HOM05D003385 ORTHO05D003844 9.6e-06 52.8 52 48.1
Cfa007764 Carpinus fangiana HOM05D003385 ORTHO05D003844 9.6e-06 52.8 52 46.2
HanXRQChr02g0049331 Helianthus annuus HOM05D003385 ORTHO05D003844 9.6e-06 52.8 51 47.1
TAR374G1520 Trochodendron aralioides HOM05D003385 ORTHO05D003844 9.6e-06 52.8 52 48.1


User provided reference genes

Program Settings