Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow5G3118 Salvia bowleyana HOM05D000922 ORTHO05D007418 0.0e+00 1935.2 974 100.0
SalBow5G1735 Salvia bowleyana HOM05D000922 ORTHO05D007418 0.0e+00 1906.3 974 98.9
MSTRG.23139 Avicennia marina HOM05D000922 ORTHO05D007418 0.0e+00 1176.0 980 64.4
Migut.O00098 Erythranthe guttata HOM05D000922 ORTHO05D007418 0.0e+00 1112.1 979 61.1
Oeu016401.1 Olea europaea HOM05D000922 ORTHO05D007418 6.0e-295 1017.7 980 57.3
SGA_v2.0_scaffold90G27900 Striga asiatica HOM05D000922 ORTHO05D007418 1.1e-283 980.3 978 56.5
Nitab4.5_0001514g0050 Nicotiana tabacum HOM05D000922 ORTHO05D007418 8.0e-231 804.7 1001 47.1
Lj9A446G57 Lonicera japonica HOM05D000922 ORTHO05D007418 1.4e-230 803.9 995 48.9
unitig_26.g9619 Utricularia gibba HOM05D000922 ORTHO05D007418 1.4e-230 803.9 954 49.3
Peaxi162Scf00255g01019 Petunia axillaris HOM05D000922 ORTHO05D007418 2.3e-230 803.1 1044 46.3
Cc04_g12110 Coffea canephora HOM05D000922 ORTHO05D007418 6.7e-230 801.6 952 50.0
CSS0017974 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D007418 1.7e-220 770.4 1046 45.7
GSVIVG01007724001 Vitis vinifera HOM05D000922 ORTHO05D007418 2.2e-220 770.0 967 47.7
Hma1.2p1_2469F.1_g322680 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 3.1e-219 766.1 1042 45.3
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 7.7e-218 761.5 1016 46.5
MD06G1172500 Malus domestica HOM05D000922 ORTHO05D007418 4.2e-216 755.7 1056 45.3
Cfa019149 Carpinus fangiana HOM05D000922 ORTHO05D007418 1.2e-213 747.7 1048 44.8
Thecc.03G014400 Theobroma cacao HOM05D000922 ORTHO05D007418 4.8e-212 742.3 986 45.9
FvH4_5g05470 Fragaria vesca HOM05D000922 ORTHO05D007418 1.4e-211 740.7 1035 45.2
Manes.14G064400 Manihot esculenta HOM05D000922 ORTHO05D007418 1.4e-211 740.7 1023 44.9
Sabra15G0102900 Salix brachista HOM05D000922 ORTHO05D007418 2.4e-211 740.0 1008 46.3
Hma1.2p1_2165F.1_g315780 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 5.4e-211 738.8 787 52.0
MD14G1178400 Malus domestica HOM05D000922 ORTHO05D007418 1.2e-210 737.6 1072 44.1
QL10p011002 Quercus lobata HOM05D000922 ORTHO05D007418 3.5e-210 736.1 1013 45.5
Prupe.5G171800 Prunus persica HOM05D000922 ORTHO05D007418 4.5e-210 735.7 1051 46.1
CAN.G1166.3 Capsicum annuum HOM05D000922 ORTHO05D007418 7.7e-210 734.9 834 49.0
FAN18G1332 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.3e-209 734.2 1034 44.9
Potri.012G082500 Populus trichocarpa HOM05D000922 ORTHO05D007418 1.3e-209 734.2 1019 44.9
Peaxi162Scf00089g01840 Petunia axillaris HOM05D000922 ORTHO05D007418 1.5e-208 730.7 796 50.1
Atru.chr9.2494 Acer truncatum HOM05D000922 ORTHO05D007418 1.9e-208 730.3 1023 44.2
RcHm_v2.0_Chr7g0193371 Rosa chinensis HOM05D000922 ORTHO05D007418 1.9e-208 730.3 1034 45.0
Duzib205G1607 Durio zibethinus HOM05D000922 ORTHO05D007418 2.5e-208 729.9 955 47.2
FAN08G1289 Fragaria x ananassa HOM05D000922 ORTHO05D007418 2.5e-208 729.9 1037 45.2
Potri.015G078300 Populus trichocarpa HOM05D000922 ORTHO05D007418 3.3e-208 729.6 997 45.6
Sabra12G0059200 Salix brachista HOM05D000922 ORTHO05D007418 9.5e-208 728.0 1025 44.9
Sopen03g031910 Solanum pennellii HOM05D000922 ORTHO05D007418 1.2e-207 727.6 832 48.7
CiPaw.11G024700 Carya illinoinensis HOM05D000922 ORTHO05D007418 3.6e-207 726.1 1063 43.8
Haze_07516 Corylus avellana HOM05D000922 ORTHO05D007418 8.9e-206 721.5 1105 43.0
Ciclev10018588m.g Citrus clementina HOM05D000922 ORTHO05D007418 1.5e-205 720.7 1062 44.6
DCAR_016480 Daucus carota HOM05D000922 ORTHO05D007418 1.8e-203 713.8 995 45.4
FAN18G2587 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.8e-203 713.8 1081 43.2
Eucgr.B00297 Eucalyptus grandis HOM05D000922 ORTHO05D007418 7.8e-202 708.4 989 45.3
Gorai.008G296200 Gossypium raimondii HOM05D000922 ORTHO05D007418 1.5e-200 704.1 987 45.5
Gohir.D12G275700 Gossypium hirsutum HOM05D000922 ORTHO05D007418 5.6e-200 702.2 985 45.4
CANSAT80G2096 Cannabis sativa HOM05D000922 ORTHO05D007418 4.7e-199 699.1 1053 43.7
FAN13G2825 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.0e-198 698.0 1083 42.3
PGR083G1532 Punica granatum HOM05D000922 ORTHO05D007418 1.0e-198 698.0 1008 44.0
TAR622G0946 Trochodendron aralioides HOM05D000922 ORTHO05D007418 3.1e-198 696.4 1030 43.4
Duzib068G1349 Durio zibethinus HOM05D000922 ORTHO05D007418 1.7e-196 690.6 998 45.5
FAN04G3074 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.9e-195 687.2 871 46.2
Lsat_1_v5_gn_5_15041 Lactuca sativa HOM05D000922 ORTHO05D007418 1.2e-194 684.5 994 43.2
Sc04g0001750 Simmondsia chinensis HOM05D000922 ORTHO05D007418 1.0e-193 681.4 1020 43.8
EL10Ac5g10730 Beta vulgaris HOM05D000922 ORTHO05D007418 1.5e-192 677.6 987 44.1
TWI23G1000 Tripterygium wilfordii HOM05D000922 ORTHO05D007418 2.5e-192 676.8 1040 42.4
Ca_16166_v3 Cicer arietinum L. HOM05D000922 ORTHO05D007418 7.3e-192 675.2 975 45.4
arahy.Tifrunner.gnm1.ann1.9TFG5W Arachis hypogaea HOM05D000922 ORTHO05D007418 2.1e-191 673.7 1019 42.8
AUR62030946 Chenopodium quinoa HOM05D000922 ORTHO05D007418 2.1e-191 673.7 993 44.6
AUR62008194 Chenopodium quinoa HOM05D000922 ORTHO05D007418 5.2e-190 669.1 979 43.9
arahy.Tifrunner.gnm1.ann1.F0ZNJX Arachis hypogaea HOM05D000922 ORTHO05D007418 6.8e-190 668.7 1025 43.2
TPR.G20687 Trifolium pratense HOM05D000922 ORTHO05D007418 1.3e-188 664.5 969 43.7
Glyma.04G184600 Glycine max HOM05D000922 ORTHO05D007418 2.2e-188 663.7 961 44.6
HanXRQChr05g0155771 Helianthus annuus HOM05D000922 ORTHO05D007418 4.1e-187 659.4 968 42.7
Hund02754 Selenicereus undatus HOM05D000922 ORTHO05D007418 4.1e-187 659.4 983 44.2
Psat0ss3962g0400 Pisum sativum HOM05D000922 ORTHO05D007418 7.1e-187 658.7 958 43.8
Solyc03g112830.4 Solanum lycopersicum HOM05D000922 ORTHO05D007418 1.6e-186 657.5 831 44.8
ClCG06G017060 Citrullus lanatus HOM05D000922 ORTHO05D007418 2.3e-185 653.7 1068 40.7
Nn4g22714 Nelumbo nucifera HOM05D000922 ORTHO05D007418 1.1e-184 651.4 1119 40.8
Thhalv10010097m.g Eutrema salsugineum HOM05D000922 ORTHO05D007418 5.6e-184 649.0 1000 42.4
PSO478G1387 Papaver somniferum HOM05D000922 ORTHO05D007418 1.2e-183 647.9 1026 40.4
Phvul.009G177300 Phaseolus vulgaris HOM05D000922 ORTHO05D007418 3.6e-183 646.4 961 42.9
Medtr3g077620 Medicago truncatula HOM05D000922 ORTHO05D007418 1.1e-182 644.8 962 43.5
Lj1g0015886 Lotus japonicus HOM05D000922 ORTHO05D007418 1.4e-182 644.4 966 44.1
vmacro19399 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 1.4e-182 644.4 455 67.5
VMungo1309G1607 Vigna mungo HOM05D000922 ORTHO05D007418 2.3e-182 643.7 971 42.9
PSO017G6576 Papaver somniferum HOM05D000922 ORTHO05D007418 5.2e-182 642.5 1025 40.4
THA.LOC104798972 Tarenaya hassleriana HOM05D000922 ORTHO05D007418 2.6e-181 640.2 985 43.1
Glyma.06G181100 Glycine max HOM05D000922 ORTHO05D007418 3.4e-181 639.8 959 43.5
Sp5g13830 Schrenkiella parvula HOM05D000922 ORTHO05D007418 4.9e-180 636.0 962 42.3
Aqoxy3G02884 Aquilegia oxysepala HOM05D000922 ORTHO05D007418 1.1e-179 634.8 1043 41.1
Dinv38573 Davidia involucrata HOM05D000922 ORTHO05D007418 1.4e-179 634.4 701 49.9
CARHR156940 Cardamine hirsuta HOM05D000922 ORTHO05D007418 2.4e-179 633.6 956 41.7
Aa31LG4G16800 Aethionema arabicum HOM05D000922 ORTHO05D007418 2.7e-178 630.2 982 41.9
AL5G27540 Arabidopsis lyrata HOM05D000922 ORTHO05D007418 7.8e-178 628.6 955 42.0
Carub.0005s1432 Capsella rubella HOM05D000922 ORTHO05D007418 1.3e-177 627.9 1002 40.6
Lalb_Chr23g0273281 Lupinus albus HOM05D000922 ORTHO05D007418 2.5e-176 623.6 453 66.7
AT3G48195 Arabidopsis thaliana HOM05D000922 ORTHO05D007418 2.8e-175 620.2 958 41.5
Sed0021678 Sechium edule HOM05D000922 ORTHO05D007418 2.8e-175 620.2 995 41.0
Ah.02g110580 Amaranthus hybridus HOM05D000922 ORTHO05D007418 3.6e-175 619.8 1059 39.6
BcaB05g22925 Brassica carinata HOM05D000922 ORTHO05D007418 5.2e-174 615.9 951 41.3
BolC1t03155H Brassica oleracea HOM05D000922 ORTHO05D007418 3.2e-171 606.7 957 41.0
BraA01t02462Z Brassica rapa HOM05D000922 ORTHO05D007418 4.2e-171 606.3 961 41.8
BcaC09g49852 Brassica carinata HOM05D000922 ORTHO05D007418 3.5e-170 603.2 957 41.0
MELO3C017091.2 Cucumis melo HOM05D000922 ORTHO05D007418 6.0e-170 602.4 1022 40.7
Nitab4.5_0000025g0520 Nicotiana tabacum HOM05D000922 ORTHO05D007418 7.8e-170 602.1 905 42.7
Gohir.A12G275000 Gossypium hirsutum HOM05D000922 ORTHO05D007418 5.1e-169 599.4 939 43.3
A01p25510 Brassica napus HOM05D000922 ORTHO05D007418 1.2e-165 588.2 971 40.8
ATR1091G081 Amborella trichopoda HOM05D000922 ORTHO05D007418 9.9e-157 558.5 1022 38.0
Os01g0549500 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D007418 2.7e-154 550.4 540 53.5
CDE06G1806 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 1.4e-150 538.1 995 37.4
HPP92_009707 Vanilla planifolia HOM05D000922 ORTHO05D007418 1.2e-149 535.0 977 38.2
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 5.1e-145 519.6 1016 39.3
Actinidia33077 Actinidia chinensis HOM05D000922 ORTHO05D007418 2.9e-132 477.2 513 50.5
CsaV3_1G001450 Cucumis sativus L. HOM05D000922 ORTHO05D007418 9.1e-126 455.7 915 36.8
Zm00001eb162380 Zea mays HOM05D000922 ORTHO05D007418 9.1e-126 455.7 495 49.3
Actinidia19330 Actinidia chinensis HOM05D000922 ORTHO05D007418 3.3e-120 437.2 850 38.9
Mapoly0023s0026 Marchantia polymorpha HOM05D000922 ORTHO05D007418 1.2e-114 418.7 487 47.2
COL.COLO4_30068 Corchorus olitorius HOM05D000922 ORTHO05D007418 5.3e-110 403.3 858 35.7
SEGI_19196 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 1.3e-108 398.7 796 36.4
SEGI_24933 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 4.2e-107 393.7 594 39.4
SHI17077 Sapria himalayana HOM05D000922 ORTHO05D007418 4.0e-105 387.1 713 34.6
Pp3c26_1280 Physcomitrium patens HOM05D000922 ORTHO05D007418 2.6e-104 384.4 748 36.0
SMO367G0209 Selaginella moellendorffii HOM05D000922 ORTHO05D007418 2.6e-104 384.4 480 43.5
Cpa.g.sc2974.2 Carica papaya HOM05D000922 ORTHO05D007418 3.1e-94 350.9 212 74.5
Cpa.g.sc2974.1 Carica papaya HOM05D000922 ORTHO05D007418 1.3e-71 275.8 709 33.1
ECA246G0682 Erigeron canadensis HOM05D000922 ORTHO05D007418 7.1e-70 270.0 674 33.5
C01p31950 Brassica napus HOM05D000922 ORTHO05D007418 5.2e-65 253.8 695 31.8
ECA246G4214 Erigeron canadensis HOM05D000922 ORTHO05D007418 5.1e-52 210.7 122 79.5
Dinv20638 Davidia involucrata HOM05D000922 ORTHO05D007418 1.6e-45 189.1 124 75.0
CDE07G0520 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 1.9e-27 129.0 279 32.6
vmacro19400 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 2.6e-24 118.6 589 29.0
Psat4g066520 Pisum sativum HOM05D001026 ORTHO05D007418 6.3e-18 97.4 91 57.1
PRCOL_00005721 Prasinoderma coloniale HOM05D000922 ORTHO05D007418 3.1e-17 95.1 201 31.3
Peaxi162Scf00009g02111 Petunia axillaris HOM05D000861 ORTHO05D007418 3.9e-12 78.2 49 67.3
Peaxi162Scf00397g00009 Petunia axillaris HOM05D000922 ORTHO05D015732 3.9e-12 78.2 56 58.9
Peaxi162Scf01130g00212 Petunia axillaris HOM05D000861 ORTHO05D007418 3.9e-12 78.2 49 67.3
CAN.G1651.1 Capsicum annuum HOM05D003439 ORTHO05D000484 5.1e-12 77.8 48 72.9
Peaxi162Scf00470g00024 Petunia axillaris HOM05D000861 ORTHO05D007418 6.7e-12 77.4 81 46.9
Lalb_Chr23g0273291 Lupinus albus HOM05D000922 ORTHO05D007418 9.7e-11 73.6 526 26.8
Peaxi162Scf00304g01332 Petunia axillaris HOM05D000922 ORTHO05D007418 2.2e-10 72.4 49 61.2
Actinidia33076 Actinidia chinensis HOM05D000922 ORTHO05D007418 4.1e-09 68.2 60 58.3
Cfa000646 Carpinus fangiana HOM05D000922 ORTHO05D007418 1.5e-08 66.2 34 85.3
Dinv38572 Davidia involucrata HOM05D000922 ORTHO05D008200 5.5e-06 57.8 128 36.7


User provided reference genes

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