Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow5G3019 Salvia bowleyana HOM05D007785 ORTHO05D008997 6.7e-38 160.2 83 100.0
MSTRG.17094 Avicennia marina HOM05D007785 ORTHO05D008997 6.5e-17 90.5 82 59.8
Migut.B01462 Erythranthe guttata HOM05D007785 ORTHO05D008997 6.1e-15 84.0 81 60.5
Oeu021958.1 Olea europaea HOM05D007785 ORTHO05D008997 2.3e-14 82.0 80 57.5
Oeu024374.1 Olea europaea HOM05D007785 ORTHO05D008997 4.4e-13 77.8 88 52.3
SalBow4G1855 Salvia bowleyana HOM05D007785 ORTHO05D008997 7.5e-13 77.0 80 55.0
Peaxi162Scf00901g00032 Petunia axillaris HOM05D007785 ORTHO05D008997 2.8e-12 75.1 80 50.0
Peaxi162Scf01144g00004 Petunia axillaris HOM05D007785 ORTHO05D008997 1.1e-11 73.2 81 50.6
Nitab4.5_0001476g0130 Nicotiana tabacum HOM05D007785 ORTHO05D008997 1.4e-11 72.8 81 50.6
CSS0006779 Camellia sinensis var. sinensis HOM05D007785 ORTHO05D008997 9.1e-11 70.1 81 50.6
Cc02_g26020 Coffea canephora HOM05D007785 ORTHO05D008997 1.2e-10 69.7 81 51.9
Nitab4.5_0003887g0040 Nicotiana tabacum HOM05D007785 ORTHO05D008997 2.7e-10 68.6 69 56.5
Hma1.2p1_0601F.1_g187290 Hydrangea macrophylla HOM05D007785 ORTHO05D008997 3.5e-10 68.2 81 53.1
Solyc01g080890.2 Solanum lycopersicum HOM05D007785 ORTHO05D008997 3.5e-10 68.2 76 53.9
Sopen01g032480 Solanum pennellii HOM05D007785 ORTHO05D008997 3.5e-10 68.2 76 51.3
Hma1.2p1_0021F.1_g014470 Hydrangea macrophylla HOM05D007785 ORTHO05D008997 5.9e-10 67.4 79 53.2
Migut.N01702 Erythranthe guttata HOM05D007785 ORTHO05D008997 7.7e-10 67.0 79 53.2
Atru.chr5.15 Acer truncatum HOM05D007785 ORTHO05D008997 1.7e-09 65.9 80 51.2
PGSC0003DMG400001700 Solanum tuberosum HOM05D007785 ORTHO05D008997 1.7e-09 65.9 76 51.3
Dinv43998 Davidia involucrata HOM05D007785 ORTHO05D008997 2.2e-09 65.5 65 58.5
Actinidia05806 Actinidia chinensis HOM05D007785 ORTHO05D008997 6.5e-09 63.9 81 49.4
Nitab4.5_0000166g0090 Nicotiana tabacum HOM05D007785 ORTHO05D008997 7.2e-08 60.5 75 52.0
Nitab4.5_0006705g0010 Nicotiana tabacum HOM05D007785 ORTHO05D008997 7.2e-08 60.5 75 52.0
DCAR_029543 Daucus carota HOM05D007785 ORTHO05D008997 9.4e-08 60.1 78 44.9
RcHm_v2.0_Chr1g0341401 Rosa chinensis HOM05D007785 ORTHO05D008997 1.2e-07 59.7 79 44.3
CiPaw.13G020000 Carya illinoinensis HOM05D007785 ORTHO05D008997 1.6e-07 59.3 85 47.1
DCAR_025013 Daucus carota HOM05D007785 ORTHO05D008997 2.1e-07 58.9 83 43.4
CSS0013282 Camellia sinensis var. sinensis HOM05D007785 ORTHO05D008997 4.7e-07 57.8 80 47.5
ECA234G3743 Erigeron canadensis HOM05D007785 ORTHO05D008997 8.0e-07 57.0 81 48.1
FvH4_7g07910 Fragaria vesca HOM05D007785 ORTHO05D008997 1.4e-06 56.2 81 45.7
FAN06G1471 Fragaria x ananassa HOM05D007785 ORTHO05D008997 1.4e-06 56.2 81 45.7
FAN10G3075 Fragaria x ananassa HOM05D007785 ORTHO05D008997 1.4e-06 56.2 81 45.7
MD07G1083000 Malus domestica HOM05D007785 ORTHO05D008997 1.8e-06 55.8 81 48.1
Rhsim01G0145700 Rhododendron simsii HOM05D007785 ORTHO05D008997 1.8e-06 55.8 84 48.8
FAN01G0084 Fragaria x ananassa HOM05D007785 ORTHO05D008997 2.3e-06 55.5 81 44.4
unitig_5.g30995 Utricularia gibba HOM05D000121 ORTHO05D000102 3.0e-06 55.1 77 49.4
unitig_748.g7129 Utricularia gibba HOM05D000121 ORTHO05D000102 3.0e-06 55.1 77 49.4
MD02G1229100 Malus domestica HOM05D007785 ORTHO05D008997 6.8e-06 53.9 79 43.0
FAN03G1138 Fragaria x ananassa HOM05D007785 ORTHO05D008997 8.8e-06 53.5 81 44.4
QL04p025073 Quercus lobata HOM05D007785 ORTHO05D008997 8.8e-06 53.5 77 45.5
Thecc.03G232200 Theobroma cacao HOM05D012518 ORTHO05D008997 8.8e-06 53.5 76 46.1


User provided reference genes

Program Settings