Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow5G2661 Salvia bowleyana HOM05D005646 ORTHO05D006828 1.5e-267 925.6 483 100.0
SalBow5G2332 Salvia bowleyana HOM05D005646 ORTHO05D006828 3.4e-259 897.9 500 95.4
MSTRG.20533 Avicennia marina HOM05D005646 ORTHO05D006828 9.3e-148 527.7 529 59.0
Migut.B01206 Erythranthe guttata HOM05D005646 ORTHO05D006828 3.7e-136 489.2 521 58.0
Dinv32048 Davidia involucrata HOM05D005646 ORTHO05D006828 4.2e-124 449.1 503 51.3
Hma1.2p1_0902F.1_g234850 Hydrangea macrophylla HOM05D005646 ORTHO05D006828 1.0e-122 444.5 505 53.5
SGA_v2.0_scaffold249G44948 Striga asiatica HOM05D005646 ORTHO05D006828 1.2e-118 431.0 543 52.1
QL04p013757 Quercus lobata HOM05D005646 ORTHO05D006828 7.0e-111 405.2 489 51.9
CSS0034883 Camellia sinensis var. sinensis HOM05D005646 ORTHO05D006828 1.0e-109 401.4 470 52.3
CiPaw.13G011000 Carya illinoinensis HOM05D005646 ORTHO05D006828 7.2e-108 395.2 512 49.6
CSS0050243 Camellia sinensis var. sinensis HOM05D005646 ORTHO05D006828 1.6e-107 394.0 480 50.8
Peaxi162Scf00309g00328 Petunia axillaris HOM05D005646 ORTHO05D006828 6.7e-106 388.7 438 52.3
MD02G1293900 Malus domestica HOM05D005646 ORTHO05D006828 1.5e-105 387.5 481 49.1
Duzib128G0351 Durio zibethinus HOM05D005646 ORTHO05D006828 2.6e-105 386.7 405 53.6
Cc02_g29140 Coffea canephora HOM05D005646 ORTHO05D006828 4.4e-105 386.0 492 48.2
Solyc01g068470.4 Solanum lycopersicum HOM05D005646 ORTHO05D006828 5.7e-105 385.6 432 52.1
Ca_20909_v3 Cicer arietinum L. HOM05D005646 ORTHO05D006828 7.5e-105 385.2 428 51.6
CAN.G1571.4 Capsicum annuum HOM05D005646 ORTHO05D006828 1.3e-104 384.4 478 49.6
Manes.11G002900 Manihot esculenta HOM05D005646 ORTHO05D006828 3.7e-104 382.9 404 55.2
DCAR_022352 Daucus carota HOM05D005646 ORTHO05D006828 8.3e-104 381.7 493 47.9
Eucgr.J01194 Eucalyptus grandis HOM05D005646 ORTHO05D006828 1.4e-103 380.9 405 55.1
Ciclev10031582m.g Citrus clementina HOM05D005646 ORTHO05D006828 1.6e-102 377.5 368 56.8
GSVIVG01000839001 Vitis vinifera HOM05D005646 ORTHO05D006828 2.0e-102 377.1 401 53.9
CANSAT54G2531 Cannabis sativa HOM05D005646 ORTHO05D006828 7.7e-102 375.2 366 56.8
Sopen01g030430 Solanum pennellii HOM05D005646 ORTHO05D006828 7.7e-102 375.2 466 48.7
Nitab4.5_0000316g0120 Nicotiana tabacum HOM05D005646 ORTHO05D006828 1.0e-101 374.8 444 49.8
Gorai.011G293500 Gossypium raimondii HOM05D005646 ORTHO05D006828 1.1e-100 371.3 416 50.5
COL.COLO4_33459 Corchorus olitorius HOM05D005646 ORTHO05D006828 2.5e-100 370.2 347 57.9
Glyma.11G113800 Glycine max HOM05D005646 ORTHO05D006828 2.5e-100 370.2 352 56.8
Lj9A646T48 Lonicera japonica HOM05D005646 ORTHO05D006828 2.5e-100 370.2 353 57.2
Gohir.D10G253200 Gossypium hirsutum HOM05D005646 ORTHO05D006828 3.2e-100 369.8 416 50.2
ClCG01G007660 Citrullus lanatus HOM05D005646 ORTHO05D006828 1.2e-99 367.9 459 49.5
ECA234G1046 Erigeron canadensis HOM05D005646 ORTHO05D006828 1.6e-99 367.5 368 55.4
VMungo1127G2196 Vigna mungo HOM05D005646 ORTHO05D006828 2.7e-99 366.7 393 53.9
Hund13332 Selenicereus undatus HOM05D005646 ORTHO05D006828 6.1e-99 365.5 515 45.0
CsaV3_5G024710 Cucumis sativus L. HOM05D005646 ORTHO05D006828 8.0e-99 365.2 417 50.8
Sabra01G0018200 Salix brachista HOM05D005646 ORTHO05D000112 1.0e-98 364.8 506 47.6
HanXRQChr16g0525351 Helianthus annuus HOM05D005646 ORTHO05D006828 1.8e-98 364.0 362 55.0
MELO3C005130.2 Cucumis melo HOM05D005646 ORTHO05D006828 2.3e-98 363.6 415 52.8
Gohir.A10G241000 Gossypium hirsutum HOM05D005646 ORTHO05D006828 4.0e-98 362.8 403 50.4
Lsat_1_v5_gn_4_30541 Lactuca sativa HOM05D005646 ORTHO05D006828 4.0e-98 362.8 502 46.0
Sc17g0003830 Simmondsia chinensis HOM05D005646 ORTHO05D006828 4.0e-98 362.8 418 49.5
Potri.001G024200 Populus trichocarpa HOM05D005646 ORTHO05D006828 5.2e-98 362.5 403 54.1
Atru.chr11.2492 Acer truncatum HOM05D005646 ORTHO05D006828 1.2e-97 361.3 434 49.5
Ah.10g030810 Amaranthus hybridus HOM05D005646 ORTHO05D006828 2.0e-97 360.5 504 43.7
AUR62032557 Chenopodium quinoa HOM05D005646 ORTHO05D006828 2.6e-97 360.1 564 41.1
THA.LOC104824183 Tarenaya hassleriana HOM05D005646 ORTHO05D006828 4.4e-97 359.4 359 53.8
EL10Ac2g02850 Beta vulgaris HOM05D005646 ORTHO05D006828 1.3e-96 357.8 561 41.4
unitig_746.g26627 Utricularia gibba HOM05D005646 ORTHO05D006828 1.7e-96 357.5 510 46.5
AUR62031673 Chenopodium quinoa HOM05D005646 ORTHO05D006828 2.2e-96 357.1 529 42.2
CDE08G1053 Ceratophyllum demersum HOM05D005646 ORTHO05D006828 3.7e-96 356.3 445 48.8
TPR.G30507 Trifolium pratense HOM05D005646 ORTHO05D006828 4.8e-96 355.9 477 45.9
FAN18G3275 Fragaria x ananassa HOM05D005646 ORTHO05D006828 6.3e-96 355.5 352 54.8
Medtr4g071010 Medicago truncatula HOM05D005646 ORTHO05D006828 1.1e-95 354.8 428 48.6
MBI19_g40603_MAGBIO Magnolia biondii HOM05D005646 ORTHO05D006828 1.4e-95 354.4 353 57.5
Sed0017230 Sechium edule HOM05D005646 ORTHO05D006828 1.4e-95 354.4 516 45.5
FvH4_5g29000 Fragaria vesca HOM05D005646 ORTHO05D006828 1.8e-95 354.0 352 54.3
Thecc.10G006200 Theobroma cacao HOM05D005646 ORTHO05D006828 2.4e-95 353.6 431 49.0
PGR142G3067 Punica granatum HOM05D005646 ORTHO05D006828 9.1e-95 351.7 404 51.0
RcHm_v2.0_Chr7g0221681 Rosa chinensis HOM05D005646 ORTHO05D006828 2.0e-94 350.5 356 53.7
FAN13G1025 Fragaria x ananassa HOM05D005646 ORTHO05D006828 2.7e-94 350.1 355 53.2
FAN08G2254 Fragaria x ananassa HOM05D005646 ORTHO05D006828 4.5e-94 349.4 354 54.0
ATR0217G018 Amborella trichopoda HOM05D005646 ORTHO05D006828 7.7e-94 348.6 491 45.8
Lj3g0019487 Lotus japonicus HOM05D005646 ORTHO05D006828 1.0e-93 348.2 404 49.8
TWI63G1320 Tripterygium wilfordii HOM05D005646 ORTHO05D006828 1.3e-93 347.8 468 46.4
Atru.chr11.2464 Acer truncatum HOM05D005646 ORTHO05D006828 2.3e-93 347.1 376 53.2
Carub.0004s2080 Capsella rubella HOM05D005646 ORTHO05D006828 2.5e-92 343.6 401 51.6
arahy.Tifrunner.gnm1.ann1.HJ7TPY Arachis hypogaea HOM05D005646 ORTHO05D006828 4.7e-91 339.3 318 58.8
CARHR133490 Cardamine hirsuta HOM05D005646 ORTHO05D006828 1.8e-90 337.4 354 55.1
Actinidia19445 Actinidia chinensis HOM05D005646 ORTHO05D006828 2.3e-90 337.0 325 54.8
Aqoxy1G00222 Aquilegia oxysepala HOM05D005646 ORTHO05D006828 2.3e-90 337.0 406 48.5
Nn7g36491 Nelumbo nucifera HOM05D005646 ORTHO05D006828 3.0e-90 336.7 409 51.1
Lalb_Chr03g0025471 Lupinus albus HOM05D005646 ORTHO05D006828 6.3e-88 328.9 362 50.6
Sp4g21170 Schrenkiella parvula HOM05D005646 ORTHO05D006828 8.3e-88 328.6 438 46.6
A03p21590 Brassica napus HOM05D005646 ORTHO05D006828 1.1e-87 328.2 424 47.4
C03p25580 Brassica napus HOM05D005646 ORTHO05D006828 1.4e-87 327.8 439 45.8
AL4G36080 Arabidopsis lyrata HOM05D005646 ORTHO05D006828 1.8e-87 327.4 413 49.2
Haze_03084 Corylus avellana HOM05D005646 ORTHO05D006828 2.0e-86 323.9 334 56.3
Prupe.2G029800 Prunus persica HOM05D005646 ORTHO05D006828 5.9e-86 322.4 405 48.1
BraA03t11395Z Brassica rapa HOM05D005646 ORTHO05D006828 7.8e-86 322.0 443 46.0
BolC3t14946H Brassica oleracea HOM05D005646 ORTHO05D006828 2.9e-85 320.1 342 52.6
AT2G38780 Arabidopsis thaliana HOM05D005646 ORTHO05D006828 1.1e-84 318.2 435 47.1
arahy.Tifrunner.gnm1.ann1.2P0PPD Arachis hypogaea HOM05D005646 ORTHO05D006828 1.2e-83 314.7 497 42.9
Cpa.g.sc197.4 Carica papaya HOM05D005646 ORTHO05D006828 2.8e-83 313.5 353 51.8
Aa31LG5G20900 Aethionema arabicum HOM05D005646 ORTHO05D006828 4.4e-81 306.2 473 43.3
PSO063G6839 Papaver somniferum HOM05D005646 ORTHO05D006828 2.2e-80 303.9 404 45.5
Nitab4.5_0013777g0020 Nicotiana tabacum HOM05D005646 ORTHO05D006828 2.9e-80 303.5 445 44.5
Thhalv10016593m.g Eutrema salsugineum HOM05D005646 ORTHO05D006828 3.5e-78 296.6 395 47.8
PSO341G0002 Papaver somniferum HOM05D005646 ORTHO05D006828 3.0e-77 293.5 295 51.9
TAR053G0001 Trochodendron aralioides HOM05D005646 ORTHO05D006828 3.7e-72 276.6 527 38.0
SalBow1G3971 Salvia bowleyana HOM05D005646 ORTHO05D006828 4.1e-71 273.1 410 47.1
vmacro13731 Vaccinium macrocarpon HOM05D005646 ORTHO05D006828 2.1e-70 270.8 811 30.0
Rhsim07G0062900 Rhododendron simsii HOM05D005646 ORTHO05D006828 4.6e-70 269.6 257 53.3
SEGI_25656 Sequoiadendron giganteum HOM05D005646 ORTHO05D006828 4.6e-70 269.6 403 42.9
HPP92_001013 Vanilla planifolia HOM05D005646 ORTHO05D006828 1.7e-69 267.7 294 49.7
Dinv31492 Davidia involucrata HOM05D005646 ORTHO05D006828 4.0e-66 256.5 400 42.8
Mapoly0066s0082 Marchantia polymorpha HOM05D005646 ORTHO05D006828 4.3e-60 236.5 291 49.1
Sc15g0003140 Simmondsia chinensis HOM05D005646 ORTHO05D006828 5.6e-60 236.1 266 46.6
Psat7g183120 Pisum sativum HOM05D005646 ORTHO05D006828 1.7e-56 224.6 283 46.6
Phvul.011G041800 Phaseolus vulgaris HOM05D005646 ORTHO05D006828 6.4e-56 222.6 282 48.2
Zm00001eb347150 Zea mays HOM05D005646 ORTHO05D006828 1.9e-52 211.1 414 36.0
AL4G20430 Arabidopsis lyrata HOM05D005646 ORTHO05D006828 2.8e-51 207.2 263 49.0
Pp3c21_7940 Physcomitrium patens HOM05D005646 ORTHO05D006828 2.0e-49 201.1 509 33.6
Os05g0381500 Oryza sativa ssp. japonica HOM05D005646 ORTHO05D006828 3.4e-49 200.3 201 51.2
SMO145G0178 Selaginella moellendorffii HOM05D005646 ORTHO05D006828 5.8e-49 199.5 297 39.4
RcHm_v2.0_Chr2g0113191 Rosa chinensis HOM05D005646 ORTHO05D006828 2.2e-48 197.6 197 53.8
AagrBONN_evm.TU.Sc2ySwM_228.261 Anthoceros agrestis HOM05D005646 ORTHO05D006828 4.9e-48 196.4 328 37.2
RcHm_v2.0_Chr4g0400611 Rosa chinensis HOM05D005646 ORTHO05D006828 6.4e-40 169.5 148 60.1
PGSC0003DMG400000847 Solanum tuberosum HOM05D005646 ORTHO05D006828 1.6e-38 164.9 102 77.5
GSVIVG01000664001 Vitis vinifera HOM05D005646 ORTHO05D006828 1.6e-38 164.9 171 55.0
Glyma.12G039666 Glycine max HOM05D005646 ORTHO05D006828 8.7e-37 159.1 143 58.0
CBR_g29393 Chara braunii HOM05D005646 ORTHO05D006828 3.2e-31 140.6 216 38.4
PSO017G4843 Papaver somniferum HOM05D005646 ORTHO05D006828 3.0e-29 134.0 119 58.8
AL4G20290 Arabidopsis lyrata HOM05D005646 ORTHO05D006828 2.8e-27 127.5 123 53.7
SEGI_07819 Sequoiadendron giganteum HOM05D005646 ORTHO05D006828 1.7e-24 118.2 120 54.2
SEGI_35855 Sequoiadendron giganteum HOM05D005646 ORTHO05D006828 1.7e-24 118.2 120 54.2
Cre13.g607900 Chlamydomonas reinhardtii HOM05D005646 ORTHO05D006828 5.0e-24 116.7 239 30.1
Glyma.18G124100 Glycine max HOM05D005646 ORTHO05D006828 5.0e-24 116.7 152 43.4
arahy.Tifrunner.gnm1.ann1.7I4JN8 Arachis hypogaea HOM05D005646 ORTHO05D006828 2.5e-20 104.4 62 77.4
PRCOL_00006924 Prasinoderma coloniale HOM05D005646 ORTHO05D006828 7.4e-20 102.8 159 35.8
RcHm_v2.0_Chr2g0154951 Rosa chinensis HOM05D005646 ORTHO05D006828 9.7e-20 102.4 123 48.0
COL.COLO4_25675 Corchorus olitorius HOM05D005646 ORTHO05D006828 3.4e-17 94.0 64 67.2
RcHm_v2.0_Chr4g0400621 Rosa chinensis HOM05D005646 ORTHO05D006828 5.5e-15 86.7 77 57.1
arahy.Tifrunner.gnm1.ann1.B52RT5 Arachis hypogaea HOM05D005646 ORTHO05D006828 3.6e-14 84.0 52 73.1
CARHR125840 Cardamine hirsuta HOM05D005646 ORTHO05D006828 2.0e-12 78.2 120 44.2
RcHm_v2.0_Chr1g0326961 Rosa chinensis HOM05D005646 ORTHO05D006828 7.4e-12 76.3 47 72.3
RcHm_v2.0_Chr4g0400631 Rosa chinensis HOM05D005646 ORTHO05D006828 8.2e-11 72.8 45 73.3
PGSC0003DMG400000846 Solanum tuberosum HOM05D005646 ORTHO05D006828 3.1e-10 70.9 65 55.4
SalBow1G4178 Salvia bowleyana HOM05D005646 ORTHO05D006828 1.2e-09 68.9 35 91.4
CBR_g38389 Chara braunii HOM05D005646 ORTHO05D006828 1.0e-08 65.9 183 30.1
Glyma.12G039732 Glycine max HOM05D005646 ORTHO05D006828 1.3e-08 65.5 151 35.8


User provided reference genes

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