Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow5G2023 Salvia bowleyana HOM05D007144 ORTHO05D008709 1.5e-38 163.3 154 100.0
SalBow5G2895 Salvia bowleyana HOM05D007144 ORTHO05D008709 1.1e-33 147.1 77 98.7
Cc11_g02820 Coffea canephora HOM05D007144 ORTHO05D008709 2.3e-23 112.8 154 76.6
Migut.O00557 Erythranthe guttata HOM05D007144 ORTHO05D008709 2.5e-22 109.4 156 82.7
SGA_v2.0_scaffold43G16444 Striga asiatica HOM05D007144 ORTHO05D008709 1.1e-20 104.0 71 76.1
Sopen04g003740 Solanum pennellii HOM05D007144 ORTHO05D008709 1.2e-19 100.5 77 70.1
PGSC0003DMG400031376 Solanum tuberosum HOM05D007144 ORTHO05D008709 1.2e-19 100.5 77 70.1
Dinv36172 Davidia involucrata HOM05D007144 ORTHO05D008709 2.6e-19 99.4 88 63.6
CAN.G880.2 Capsicum annuum HOM05D007144 ORTHO05D008709 4.4e-19 98.6 63 76.2
Nitab4.5_0000129g0400 Nicotiana tabacum HOM05D007144 ORTHO05D008709 1.7e-18 96.7 75 70.7
Actinidia06960 Actinidia chinensis HOM05D007144 ORTHO05D008709 2.2e-18 96.3 63 77.8
Peaxi162Scf00329g00929 Petunia axillaris HOM05D007144 ORTHO05D008709 2.2e-18 96.3 74 67.6
Nitab4.5_0003882g0010 Nicotiana tabacum HOM05D007144 ORTHO05D008709 4.9e-18 95.1 74 68.9
Solyc04g008580.3 Solanum lycopersicum HOM05D007144 ORTHO05D008709 4.9e-18 95.1 74 68.9
TAR369G0480 Trochodendron aralioides HOM05D007144 ORTHO05D008709 4.9e-18 95.1 62 75.8
Potri.009G070700 Populus trichocarpa HOM05D007144 ORTHO05D008709 6.4e-18 94.7 72 68.1
Hma1.2p1_0842F.1_g227150 Hydrangea macrophylla HOM05D007144 ORTHO05D008709 8.4e-18 94.4 58 81.0
ATR0745G069 Amborella trichopoda HOM05D007144 ORTHO05D008709 1.4e-17 93.6 60 73.3
Aqoxy1G00362 Aquilegia oxysepala HOM05D007144 ORTHO05D008709 1.9e-17 93.2 58 81.0
Prupe.4G267400 Prunus persica HOM05D007144 ORTHO05D008709 2.4e-17 92.8 71 67.6
COL.COLO4_35678 Corchorus olitorius HOM05D007144 ORTHO05D008709 3.2e-17 92.4 58 79.3
Duzib168G0692 Durio zibethinus HOM05D007144 ORTHO05D008709 4.2e-17 92.0 79 65.8
MBI13_g27793_MAGBIO Magnolia biondii HOM05D007144 ORTHO05D008709 4.2e-17 92.0 72 68.1
CSS0000717 Camellia sinensis var. sinensis HOM05D007144 ORTHO05D008709 5.4e-17 91.7 68 72.1
MD03G1167000 Malus domestica HOM05D007144 ORTHO05D008709 7.1e-17 91.3 79 63.3
CiPaw.13G151300 Carya illinoinensis HOM05D007144 ORTHO05D008709 1.6e-16 90.1 73 67.1
Potri.001G276100 Populus trichocarpa HOM05D007144 ORTHO05D008709 1.6e-16 90.1 71 67.6
Ciclev10017489m.g Citrus clementina HOM05D007144 ORTHO05D008709 2.7e-16 89.4 60 73.3
Duzib150G1568 Durio zibethinus HOM05D007144 ORTHO05D008709 3.5e-16 89.0 69 71.0
Gohir.D07G124200 Gossypium hirsutum HOM05D007144 ORTHO05D008709 3.5e-16 89.0 73 67.1
Gorai.001G134000 Gossypium raimondii HOM05D007144 ORTHO05D008709 3.5e-16 89.0 73 67.1
THA.LOC104799122 Tarenaya hassleriana HOM05D007144 ORTHO05D008709 4.6e-16 88.6 62 69.4
Atru.chr3.2764 Acer truncatum HOM05D007144 ORTHO05D008709 6.0e-16 88.2 73 65.8
CDE04G3392 Ceratophyllum demersum HOM05D000144 ORTHO05D007336 1.3e-15 87.0 60 70.0
MD11G1186200 Malus domestica HOM05D007144 ORTHO05D008709 1.3e-15 87.0 57 77.2
DCAR_023846 Daucus carota HOM05D007144 ORTHO05D008709 3.0e-15 85.9 53 75.5
Sabra09G0053500 Salix brachista HOM05D007144 ORTHO05D008709 3.0e-15 85.9 71 63.4
HPP92_013978 Vanilla planifolia HOM05D007144 ORTHO05D008709 3.0e-15 85.9 79 60.8
CARHR200790 Cardamine hirsuta HOM05D007144 ORTHO05D008709 3.9e-15 85.5 57 75.4
Thhalv10014957m.g Eutrema salsugineum HOM05D007144 ORTHO05D008709 3.9e-15 85.5 56 76.8
FvH4_1g25870 Fragaria vesca HOM05D007144 ORTHO05D008709 6.6e-15 84.7 56 71.4
FAN19G1536 Fragaria x ananassa HOM05D007144 ORTHO05D008709 6.6e-15 84.7 56 71.4
FAN23G1846 Fragaria x ananassa HOM05D007144 ORTHO05D008709 6.6e-15 84.7 56 71.4
Ah.06g194530 Amaranthus hybridus HOM05D007144 ORTHO05D008709 8.7e-15 84.3 79 60.8
AL6G23120 Arabidopsis lyrata HOM05D007144 ORTHO05D008709 8.7e-15 84.3 59 71.2
Sc06g0004670 Simmondsia chinensis HOM05D007144 ORTHO05D008709 8.7e-15 84.3 58 69.0
FAN26G3363 Fragaria x ananassa HOM05D007144 ORTHO05D008709 1.1e-14 84.0 56 71.4
Thecc.09G249300 Theobroma cacao HOM05D007144 ORTHO05D008709 1.1e-14 84.0 73 64.4
Carub.0006s1083 Capsella rubella HOM05D007144 ORTHO05D008709 1.5e-14 83.6 56 73.2
Manes.02G140201 Manihot esculenta HOM05D007144 ORTHO05D008709 1.9e-14 83.2 66 68.2
Sp6g31320 Schrenkiella parvula HOM05D007144 ORTHO05D008709 1.9e-14 83.2 54 75.9
Hund07439 Selenicereus undatus HOM05D007144 ORTHO05D008709 1.9e-14 83.2 73 61.6
A10p25500 Brassica napus HOM05D007144 ORTHO05D008709 2.5e-14 82.8 56 73.2
C09p64580 Brassica napus HOM05D007144 ORTHO05D008709 2.5e-14 82.8 56 73.2
BolC9t59291H Brassica oleracea HOM05D007144 ORTHO05D008709 2.5e-14 82.8 56 73.2
BraA10t44614Z Brassica rapa HOM05D007144 ORTHO05D008709 2.5e-14 82.8 56 73.2
TAR623G0360 Trochodendron aralioides HOM05D007144 ORTHO05D008709 2.5e-14 82.8 65 66.2
EL10Ac4g10148 Beta vulgaris HOM05D007144 ORTHO05D008709 3.3e-14 82.4 73 60.3
Cpa.g.sc482.3 Carica papaya HOM05D007144 ORTHO05D008709 3.3e-14 82.4 54 75.9
AUR62006537 Chenopodium quinoa HOM05D007144 ORTHO05D008709 3.3e-14 82.4 55 72.7
RcHm_v2.0_Chr3g0485011 Rosa chinensis HOM05D007144 ORTHO05D008709 3.3e-14 82.4 51 76.5
Zm00001eb329760 Zea mays HOM05D007144 ORTHO05D008709 3.3e-14 82.4 58 67.2
AT5G12320 Arabidopsis thaliana HOM05D007144 ORTHO05D008709 4.3e-14 82.0 59 69.5
Manes.01G179700 Manihot esculenta HOM05D007144 ORTHO05D008709 5.6e-14 81.6 64 70.3
Lsat_1_v5_gn_2_34061 Lactuca sativa HOM05D007144 ORTHO05D008709 7.3e-14 81.3 71 62.0
Medtr3g088410 Medicago truncatula HOM05D007144 ORTHO05D008709 1.3e-13 80.5 71 56.3
Sed0028076 Sechium edule HOM05D007144 ORTHO05D008709 1.3e-13 80.5 61 67.2
Ca_03986_v3 Cicer arietinum L. HOM05D007144 ORTHO05D008709 1.6e-13 80.1 65 64.6
unitig_749.g14354 Utricularia gibba HOM05D007144 ORTHO05D008709 1.6e-13 80.1 81 54.3
Cfa010657 Carpinus fangiana HOM05D007144 ORTHO05D008709 2.8e-13 79.3 65 67.7
Haze_23224 Corylus avellana HOM05D007144 ORTHO05D008709 2.8e-13 79.3 65 66.2
ECA236G5047 Erigeron canadensis HOM05D007144 ORTHO05D008709 2.8e-13 79.3 79 58.2
HanXRQChr17g0535301 Helianthus annuus HOM05D007144 ORTHO05D008709 2.8e-13 79.3 72 62.5
arahy.Tifrunner.gnm1.ann1.A9WCXI Arachis hypogaea HOM05D007144 ORTHO05D008709 4.8e-13 78.6 74 58.1
Haze_03594 Corylus avellana HOM05D007144 ORTHO05D008709 8.1e-13 77.8 65 64.6
TPR.G13466 Trifolium pratense HOM05D007144 ORTHO05D008709 8.1e-13 77.8 70 54.3
arahy.Tifrunner.gnm1.ann1.FNNB0Q Arachis hypogaea HOM05D007144 ORTHO05D008709 1.1e-12 77.4 69 60.9
arahy.Tifrunner.gnm1.ann1.J3HRR4 Arachis hypogaea HOM05D007144 ORTHO05D008709 1.1e-12 77.4 69 60.9
Gohir.A07G120000 Gossypium hirsutum HOM05D007144 ORTHO05D008709 1.4e-12 77.0 66 65.2
Lj6g0012120 Lotus japonicus HOM05D007144 ORTHO05D008709 1.4e-12 77.0 65 63.1
Ca_12164_v3 Cicer arietinum L. HOM05D007144 ORTHO05D008709 2.4e-12 76.3 68 57.4
Aa31LG3G14910 Aethionema arabicum HOM05D007144 ORTHO05D008709 2.0e-11 73.2 48 75.0
Rhsim13G0210700 Rhododendron simsii HOM05D007144 ORTHO05D008709 2.0e-11 73.2 63 65.1
Atru.chr4.1901 Acer truncatum HOM05D007144 ORTHO05D008709 4.5e-11 72.0 79 54.4
CsaV3_6G039020 Cucumis sativus L. HOM05D007144 ORTHO05D008709 1.7e-10 70.1 71 50.7
AUR62000186 Chenopodium quinoa HOM05D007144 ORTHO05D008709 2.2e-10 69.7 65 56.9
Glyma.08G150200 Glycine max HOM05D007144 ORTHO05D008709 2.9e-10 69.3 65 53.8
Eucgr.B03730 Eucalyptus grandis HOM05D007144 ORTHO05D008709 4.9e-10 68.6 63 60.3
GSVIVG01037268001 Vitis vinifera HOM05D007144 ORTHO05D008709 6.4e-10 68.2 52 73.1
Psat1g051560 Pisum sativum HOM05D007144 ORTHO05D008709 8.4e-10 67.8 61 55.7
MELO3C014563.2 Cucumis melo HOM05D007144 ORTHO05D008709 1.4e-09 67.0 68 51.5
Nn7g36693 Nelumbo nucifera HOM05D007144 ORTHO05D008709 7.1e-09 64.7 50 66.0
Phvul.006G021300 Phaseolus vulgaris HOM05D007144 ORTHO05D008709 2.1e-08 63.2 41 68.3
SMO164G0043 Selaginella moellendorffii HOM05D007144 ORTHO05D008709 2.7e-08 62.8 79 45.6
CBR_g48945 Chara braunii HOM05D007144 ORTHO05D008709 4.6e-08 62.0 77 49.4
QL01p017309 Quercus lobata HOM05D007144 ORTHO05D008709 4.6e-08 62.0 68 50.0
TWI23G1223 Tripterygium wilfordii HOM05D007144 ORTHO05D008709 6.0e-08 61.6 60 61.7
Lalb_Chr18g0054451 Lupinus albus HOM05D007144 ORTHO05D008709 7.9e-08 61.2 42 71.4
Mapoly0026s0092 Marchantia polymorpha HOM05D007144 ORTHO05D008709 7.9e-08 61.2 48 60.4
CANSAT54G2482 Cannabis sativa HOM05D007144 ORTHO05D008709 1.0e-07 60.8 57 57.9
Lj1A285T18 Lonicera japonica HOM05D007144 ORTHO05D008709 1.3e-07 60.5 32 93.8
ECA233G1600 Erigeron canadensis HOM05D001964 ORTHO05D001879 5.1e-07 58.5 59 47.5
Cre12.g484500 Chlamydomonas reinhardtii HOM05D007144 ORTHO05D008709 1.9e-06 56.6 76 40.8
Pp3c2_27120 Physcomitrium patens HOM05D007144 ORTHO05D008709 2.5e-06 56.2 63 46.0


User provided reference genes

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