Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow5G1567 Salvia bowleyana HOM05D006696 ORTHO05D008683 3.6e-41 171.0 79 100.0
Sopen01g036880 Solanum pennellii HOM05D006696 ORTHO05D008683 2.4e-16 88.6 43 95.3
Sopen01g036890 Solanum pennellii HOM05D006696 ORTHO05D008683 2.4e-16 88.6 43 95.3
CAN.G388.34 Capsicum annuum HOM05D006696 ORTHO05D008683 4.0e-16 87.8 43 95.3
TAR629G0060 Trochodendron aralioides HOM05D006696 ORTHO05D008683 6.9e-16 87.0 43 90.7
Nitab4.5_0010616g0010 Nicotiana tabacum HOM05D006696 ORTHO05D008683 1.2e-15 86.3 43 93.0
PGSC0003DMG400025962 Solanum tuberosum HOM05D006696 ORTHO05D008683 1.2e-15 86.3 43 93.0
Nitab4.5_0000457g0140 Nicotiana tabacum HOM05D006696 ORTHO05D008683 1.5e-15 85.9 43 90.7
Peaxi162Scf00013g03019 Petunia axillaris HOM05D006696 ORTHO05D008683 2.0e-15 85.5 43 90.7
Sabra02G0113800 Salix brachista HOM05D006696 ORTHO05D008683 2.0e-15 85.5 43 88.4
Solyc01g091130.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 2.0e-15 85.5 43 93.0
Solyc01g091140.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 2.6e-15 85.1 43 90.7
CSS0014714 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 3.4e-15 84.7 43 90.7
Ciclev10019231m.g Citrus clementina HOM05D006696 ORTHO05D008683 3.4e-15 84.7 43 90.7
FvH4_7g11430 Fragaria vesca HOM05D006696 ORTHO05D008683 3.4e-15 84.7 43 88.4
FAN01G1519 Fragaria x ananassa HOM05D006696 ORTHO05D008683 3.4e-15 84.7 43 88.4
FAN03G1153 Fragaria x ananassa HOM05D006696 ORTHO05D008683 3.4e-15 84.7 43 88.4
FAN06G1977 Fragaria x ananassa HOM05D006696 ORTHO05D008683 3.4e-15 84.7 43 88.4
FAN06G3694 Fragaria x ananassa HOM05D006696 ORTHO05D008683 3.4e-15 84.7 43 88.4
Potri.002G146100 Populus trichocarpa HOM05D006696 ORTHO05D008683 4.5e-15 84.3 43 86.0
RcHm_v2.0_Chr1g0349711 Rosa chinensis HOM05D006696 ORTHO05D008683 4.5e-15 84.3 43 88.4
Duzib177G0277 Durio zibethinus HOM05D006696 ORTHO05D008683 5.8e-15 84.0 43 88.4
Gohir.A13G117300 Gossypium hirsutum HOM05D006696 ORTHO05D008683 5.8e-15 84.0 43 88.4
Gohir.D13G120600 Gossypium hirsutum HOM05D006696 ORTHO05D008683 5.8e-15 84.0 43 88.4
Gorai.013G134800 Gossypium raimondii HOM05D006696 ORTHO05D008683 5.8e-15 84.0 43 88.4
Cc02_g24120 Coffea canephora HOM05D006696 ORTHO05D008683 7.6e-15 83.6 43 86.0
Manes.01G267400 Manihot esculenta HOM05D006696 ORTHO05D008683 7.6e-15 83.6 43 88.4
SGA_v2.0_scaffold95G28911 Striga asiatica HOM05D006696 ORTHO05D008683 7.6e-15 83.6 43 88.4
TWI14G1225 Tripterygium wilfordii HOM05D006696 ORTHO05D008683 7.6e-15 83.6 43 88.4
ECA232G1408 Erigeron canadensis HOM05D006696 ORTHO05D008683 9.9e-15 83.2 43 88.4
Lj7C531T6 Lonicera japonica HOM05D006696 ORTHO05D008683 9.9e-15 83.2 43 83.7
Prupe.2G142200 Prunus persica HOM05D006696 ORTHO05D008683 9.9e-15 83.2 43 88.4
Migut.B01614 Erythranthe guttata HOM05D006696 ORTHO05D008683 1.3e-14 82.8 42 83.3
Nn6g34076 Nelumbo nucifera HOM05D006696 ORTHO05D008683 1.3e-14 82.8 43 86.0
Sed0011228 Sechium edule HOM05D006696 ORTHO05D008683 1.3e-14 82.8 43 86.0
AUR62004189 Chenopodium quinoa HOM05D006696 ORTHO05D008683 1.7e-14 82.4 43 86.0
AUR62013656 Chenopodium quinoa HOM05D006696 ORTHO05D008683 1.7e-14 82.4 43 86.0
Atru.chr5.281 Acer truncatum HOM05D006696 ORTHO05D008683 2.2e-14 82.0 43 86.0
CSS0026641 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 2.2e-14 82.0 43 86.0
ClCG05G002380 Citrullus lanatus HOM05D006696 ORTHO05D008683 2.2e-14 82.0 43 86.0
COL.COLO4_24599 Corchorus olitorius HOM05D006696 ORTHO05D008683 2.2e-14 82.0 43 86.0
CiPaw.01G264000 Carya illinoinensis HOM05D006696 ORTHO05D008683 2.9e-14 81.6 43 83.7
Eucgr.D02468 Eucalyptus grandis HOM05D006696 ORTHO05D008683 2.9e-14 81.6 43 86.0
MD07G1119000 Malus domestica HOM05D006696 ORTHO05D008683 2.9e-14 81.6 43 83.7
Aa31LG1G11340 Aethionema arabicum HOM05D006696 ORTHO05D008683 3.8e-14 81.3 43 83.7
HanXRQChr03g0093971 Helianthus annuus HOM05D006696 ORTHO05D008683 3.8e-14 81.3 43 88.4
GSVIVG01027661001 Vitis vinifera HOM05D006696 ORTHO05D008683 3.8e-14 81.3 43 83.7
Aqoxy7G00691 Aquilegia oxysepala HOM05D006696 ORTHO05D008683 4.9e-14 80.9 43 83.7
CANSAT21G0759 Cannabis sativa HOM05D006696 ORTHO05D008683 4.9e-14 80.9 43 83.7
CDE04G1815 Ceratophyllum demersum HOM05D006696 ORTHO05D008683 4.9e-14 80.9 43 83.7
CsaV3_3G009820 Cucumis sativus L. HOM05D006696 ORTHO05D008683 4.9e-14 80.9 43 83.7
DCAR_015916 Daucus carota HOM05D006696 ORTHO05D008683 4.9e-14 80.9 41 82.9
Hma1.2p1_0301F.1_g118560 Hydrangea macrophylla HOM05D006696 ORTHO05D008683 4.9e-14 80.9 43 81.4
EL10Ac1g00866 Beta vulgaris HOM05D006696 ORTHO05D008683 6.4e-14 80.5 43 86.0
Glyma.03G028100 Glycine max HOM05D006696 ORTHO05D008683 6.4e-14 80.5 43 83.7
Thecc.08G173400 Theobroma cacao HOM05D006696 ORTHO05D008683 6.4e-14 80.5 43 81.4
Ah.05g174590 Amaranthus hybridus HOM05D006696 ORTHO05D008683 8.4e-14 80.1 43 83.7
CARHR000320 Cardamine hirsuta HOM05D006696 ORTHO05D008683 8.4e-14 80.1 43 81.4
Lsat_1_v5_gn_3_132380 Lactuca sativa HOM05D006696 ORTHO05D008683 8.4e-14 80.1 43 83.7
Sp1g37340 Schrenkiella parvula HOM05D006696 ORTHO05D008683 8.4e-14 80.1 43 81.4
vmacro21023 Vaccinium macrocarpon HOM05D006696 ORTHO05D008683 8.4e-14 80.1 48 75.0
BcaB07g33486 Brassica carinata HOM05D006696 ORTHO05D008683 1.1e-13 79.7 43 81.4
BcaC08g43220 Brassica carinata HOM05D006696 ORTHO05D008683 1.1e-13 79.7 43 81.4
A06p03080 Brassica napus HOM05D006696 ORTHO05D008683 1.1e-13 79.7 43 81.4
C06p05680 Brassica napus HOM05D006696 ORTHO05D008683 1.1e-13 79.7 43 81.4
BolC6t35679H Brassica oleracea HOM05D006696 ORTHO05D008683 1.1e-13 79.7 43 81.4
BraA06t23521Z Brassica rapa HOM05D006696 ORTHO05D008683 1.1e-13 79.7 43 81.4
HPP92_022287 Vanilla planifolia HOM05D006696 ORTHO05D008683 1.1e-13 79.7 43 83.7
Lalb_Chr07g0189961 Lupinus albus HOM05D006696 ORTHO05D008683 1.4e-13 79.3 43 81.4
unitig_22.g5383 Utricularia gibba HOM05D006696 ORTHO05D008683 1.4e-13 79.3 43 83.7
MSTRG.20736 Avicennia marina HOM05D006696 ORTHO05D008683 1.9e-13 79.0 43 79.1
arahy.Tifrunner.gnm1.ann1.30BUB6 Arachis hypogaea HOM05D006696 ORTHO05D008683 2.4e-13 78.6 43 79.1
arahy.Tifrunner.gnm1.ann1.PBYD8I Arachis hypogaea HOM05D006696 ORTHO05D008683 2.4e-13 78.6 43 79.1
MBI12_g20403_MAGBIO Magnolia biondii HOM05D006696 ORTHO05D008683 2.4e-13 78.6 43 81.4
MELO3C006203.2 Cucumis melo HOM05D006696 ORTHO05D008683 3.2e-13 78.2 39 87.2
Dinv32364 Davidia involucrata HOM05D006696 ORTHO05D008683 3.2e-13 78.2 43 81.4
Medtr4g025130 Medicago truncatula HOM05D006696 ORTHO05D008683 3.2e-13 78.2 43 81.4
PSO782G1103 Papaver somniferum HOM05D006696 ORTHO05D008683 3.2e-13 78.2 43 81.4
THA.LOC104814083 Tarenaya hassleriana HOM05D006696 ORTHO05D008683 3.2e-13 78.2 43 81.4
Haze_16792 Corylus avellana HOM05D006696 ORTHO05D008683 4.2e-13 77.8 43 81.4
Thhalv10007140m.g Eutrema salsugineum HOM05D006696 ORTHO05D008683 4.2e-13 77.8 43 76.7
VMungo0331G0021 Vigna mungo HOM05D006696 ORTHO05D008683 4.2e-13 77.8 43 81.4
AL1G10260 Arabidopsis lyrata HOM05D006696 ORTHO05D008683 7.1e-13 77.0 40 82.5
Ca_19926_v3 Cicer arietinum L. HOM05D006696 ORTHO05D008683 7.1e-13 77.0 43 79.1
QL08p052869 Quercus lobata HOM05D006696 ORTHO05D008683 7.1e-13 77.0 41 82.9
AT1G02020 Arabidopsis thaliana HOM05D006696 ORTHO05D008683 9.3e-13 76.6 40 82.5
Carub.0001s0021 Capsella rubella HOM05D006696 ORTHO05D008683 9.3e-13 76.6 40 80.0
Phvul.010G081400 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 9.3e-13 76.6 43 79.1
Rhsim01G0149400 Rhododendron simsii HOM05D006696 ORTHO05D008683 9.3e-13 76.6 43 81.4
TPR.G7586 Trifolium pratense HOM05D006696 ORTHO05D008683 9.3e-13 76.6 43 81.4
Os10g0190800 Oryza sativa ssp. japonica HOM05D006696 ORTHO05D008683 1.2e-12 76.3 43 81.4
Zm00001eb145800 Zea mays HOM05D006696 ORTHO05D008683 1.6e-12 75.9 43 79.1
Psat7g231000 Pisum sativum HOM05D006696 ORTHO05D008683 4.6e-12 74.3 43 79.1
PSO478G1798 Papaver somniferum HOM05D006696 ORTHO05D008683 7.9e-12 73.6 43 79.1
Hund27369 Selenicereus undatus HOM05D006696 ORTHO05D008683 1.0e-11 73.2 38 84.2
AagrBONN_evm.TU.Sc2ySwM_228.1723 Anthoceros agrestis HOM05D006696 ORTHO05D008683 8.7e-11 70.1 39 79.5
Mapoly0117s0009 Marchantia polymorpha HOM05D006696 ORTHO05D008683 8.7e-11 70.1 43 69.8
ATR0041G020 Amborella trichopoda HOM05D006696 ORTHO05D008683 1.5e-10 69.3 43 72.1
Actinidia33475 Actinidia chinensis HOM05D006696 ORTHO05D008683 1.3e-09 66.2 77 49.4
SMO011G0006 Selaginella moellendorffii HOM05D006696 ORTHO05D008683 1.4e-08 62.8 40 67.5
Pp3c18_8320 Physcomitrium patens HOM05D006696 ORTHO05D008683 1.8e-08 62.4 38 68.4


User provided reference genes

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