Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow5G1452 Salvia bowleyana HOM05D000434 ORTHO05D005992 2.5e-197 691.8 324 100.0
SalBow5G5274 Salvia bowleyana HOM05D000434 ORTHO05D005992 1.9e-192 675.6 317 99.7
SalBow5G4047 Salvia bowleyana HOM05D000434 ORTHO05D005992 1.6e-183 646.0 301 100.0
Oeu036498.1 Olea europaea HOM05D000434 ORTHO05D005992 9.0e-155 550.4 317 78.9
MSTRG.4348 Avicennia marina HOM05D000434 ORTHO05D005992 9.9e-154 547.0 317 76.0
Rhsim12G0168500 Rhododendron simsii HOM05D000434 ORTHO05D005992 2.1e-151 539.3 318 75.2
SGA_v2.0_scaffold90G27827 Striga asiatica HOM05D000434 ORTHO05D005992 3.5e-151 538.5 319 76.8
Cc04_g11350 Coffea canephora HOM05D000434 ORTHO05D005992 7.9e-151 537.3 318 74.8
Oeu044591.1 Olea europaea HOM05D000434 ORTHO05D005992 1.8e-150 536.2 319 75.2
Nitab4.5_0002522g0080 Nicotiana tabacum HOM05D000434 ORTHO05D005992 3.9e-150 535.0 317 74.8
Nitab4.5_0008037g0030 Nicotiana tabacum HOM05D000434 ORTHO05D005992 5.1e-150 534.6 317 74.8
SGA_v2.0_scaffold114G31805 Striga asiatica HOM05D000434 ORTHO05D005992 5.1e-150 534.6 318 73.9
Peaxi162Scf00089g01220 Petunia axillaris HOM05D000434 ORTHO05D005992 9.6e-149 530.4 316 75.0
Migut.O00171 Erythranthe guttata HOM05D000434 ORTHO05D005992 6.2e-148 527.7 317 74.1
CAN.G126.46 Capsicum annuum HOM05D000434 ORTHO05D005992 1.8e-147 526.2 317 73.8
Lj5P131T21 Lonicera japonica HOM05D000434 ORTHO05D005992 3.1e-147 525.4 320 74.1
GSVIVG01007623001 Vitis vinifera HOM05D000434 ORTHO05D005992 5.3e-147 524.6 318 74.5
PGSC0003DMG400018193 Solanum tuberosum HOM05D000434 ORTHO05D005992 1.7e-145 519.6 317 72.2
DCAR_007452 Daucus carota HOM05D000434 ORTHO05D007220 2.2e-145 519.2 318 74.8
Solyc03g112080.1 Solanum lycopersicum HOM05D000434 ORTHO05D005992 2.9e-145 518.8 317 72.2
CSS0032276 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 4.9e-145 518.1 321 73.2
Nitab4.5_0001243g0040 Nicotiana tabacum HOM05D000434 ORTHO05D005992 8.4e-145 517.3 317 72.9
Prupe.5G164400 Prunus persica HOM05D000434 ORTHO05D005992 8.4e-145 517.3 318 72.6
Sopen03g031180 Solanum pennellii HOM05D000434 ORTHO05D005992 8.4e-145 517.3 317 71.9
Cfa019231 Carpinus fangiana HOM05D000434 ORTHO05D005992 1.4e-144 516.5 318 71.7
MD14G1170200 Malus domestica HOM05D000434 ORTHO05D005992 1.4e-144 516.5 318 73.3
CiPaw.12G032200 Carya illinoinensis HOM05D000434 ORTHO05D005992 3.2e-144 515.4 318 70.1
Migut.D02023 Erythranthe guttata HOM05D000434 ORTHO05D005992 3.2e-144 515.4 317 73.2
Glyma.17G125000 Glycine max HOM05D000434 ORTHO05D005992 3.2e-144 515.4 318 72.3
Haze_07598 Corylus avellana HOM05D000434 ORTHO05D005992 7.1e-144 514.2 318 71.4
Nitab4.5_0000025g0390 Nicotiana tabacum HOM05D000434 ORTHO05D005992 4.6e-143 511.5 317 71.0
SalBow5G0725 Salvia bowleyana HOM05D000434 ORTHO05D005992 4.6e-143 511.5 317 74.8
Peaxi162Scf00801g00033 Petunia axillaris HOM05D000434 ORTHO05D005992 6.0e-143 511.1 317 71.3
Glyma.05G042300 Glycine max HOM05D000434 ORTHO05D005992 3.0e-142 508.8 318 70.8
QL10p006660 Quercus lobata HOM05D000434 ORTHO05D005992 3.0e-142 508.8 318 70.8
PGR083G1106 Punica granatum HOM05D000434 ORTHO05D005992 3.9e-142 508.4 318 72.0
Ciclev10021198m.g Citrus clementina HOM05D000434 ORTHO05D005992 6.7e-142 507.7 318 72.3
FvH4_5g06420 Fragaria vesca HOM05D000434 ORTHO05D005992 6.7e-142 507.7 318 72.6
FAN18G2656 Fragaria x ananassa HOM05D000434 ORTHO05D005992 6.7e-142 507.7 318 72.6
TAR622G0355 Trochodendron aralioides HOM05D000434 ORTHO05D005992 1.5e-141 506.5 320 71.2
RcHm_v2.0_Chr7g0192361 Rosa chinensis HOM05D000434 ORTHO05D005992 2.5e-141 505.8 318 72.3
FAN08G0399 Fragaria x ananassa HOM05D000434 ORTHO05D005992 4.3e-141 505.0 318 72.0
VMungo1215G0774 Vigna mungo HOM05D000434 ORTHO05D005992 5.7e-141 504.6 320 69.7
TWI39G0022 Tripterygium wilfordii HOM05D000434 ORTHO05D005992 7.4e-141 504.2 318 70.8
FAN04G1602 Fragaria x ananassa HOM05D000434 ORTHO05D005992 1.6e-140 503.1 318 72.0
Lalb_Chr08g0236831 Lupinus albus HOM05D000434 ORTHO05D005992 1.6e-140 503.1 318 69.5
CANSAT80G1313 Cannabis sativa HOM05D000434 ORTHO05D005992 2.2e-140 502.7 311 70.4
Lj4g0020673 Lotus japonicus HOM05D000434 ORTHO05D005992 3.7e-140 501.9 319 71.5
Phvul.003G206000 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 4.8e-140 501.5 311 71.1
TPR.G37491 Trifolium pratense HOM05D000434 ORTHO05D007220 4.8e-140 501.5 318 69.5
CANSAT80G2029 Cannabis sativa HOM05D000434 ORTHO05D005992 1.1e-139 500.4 318 69.8
Nn4g22577 Nelumbo nucifera HOM05D000434 ORTHO05D005992 1.1e-139 500.4 316 70.3
ECA232G2851 Erigeron canadensis HOM05D000434 ORTHO05D005992 9.0e-139 497.3 318 71.4
Lalb_Chr07g0183021 Lupinus albus HOM05D000434 ORTHO05D005992 1.2e-138 496.9 318 69.2
Aqoxy5G03716 Aquilegia oxysepala HOM05D000434 ORTHO05D005992 1.5e-138 496.5 318 68.9
Cpa.g.sc968.1 Carica papaya HOM05D000434 ORTHO05D005992 1.5e-138 496.5 318 69.5
COL.COLO4_21936 Corchorus olitorius HOM05D000434 ORTHO05D005992 2.0e-138 496.1 318 69.5
Duzib068G0672 Durio zibethinus HOM05D000434 ORTHO05D005992 3.4e-138 495.4 319 70.2
arahy.Tifrunner.gnm1.ann1.Z1M7DP Arachis hypogaea HOM05D000434 ORTHO05D005992 1.7e-137 493.0 319 69.0
arahy.Tifrunner.gnm1.ann1.D0ANT3 Arachis hypogaea HOM05D000434 ORTHO05D005992 2.2e-137 492.7 319 68.7
Ca_19422_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 2.9e-137 492.3 318 70.1
EL10Ac7g17989 Beta vulgaris HOM05D000434 ORTHO05D005992 5.0e-137 491.5 315 68.9
CsaV3_1G008920 Cucumis sativus L. HOM05D000434 ORTHO05D005992 1.1e-136 490.3 321 67.3
HanXRQChr09g0272611 Helianthus annuus HOM05D000434 ORTHO05D005992 1.1e-136 490.3 318 71.4
Psat4g061720 Pisum sativum HOM05D000434 ORTHO05D005992 1.1e-136 490.3 319 69.0
Phvul.009G172800 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 1.4e-136 490.0 306 71.9
Sc04g0001380 Simmondsia chinensis HOM05D000434 ORTHO05D005992 1.4e-136 490.0 320 70.6
Phvul.009G172700 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 2.5e-136 489.2 307 71.7
Eucgr.B00212 Eucalyptus grandis HOM05D000434 ORTHO05D005992 3.2e-136 488.8 318 70.1
MELO3C002306.2 Cucumis melo HOM05D000434 ORTHO05D005992 9.4e-136 487.3 321 66.7
ClCG03G003070 Citrullus lanatus HOM05D000434 ORTHO05D005992 1.2e-135 486.9 321 67.0
Lsat_1_v5_gn_4_79260 Lactuca sativa HOM05D000434 ORTHO05D005992 1.2e-135 486.9 318 69.5
Gohir.A03G074900 Gossypium hirsutum HOM05D000434 ORTHO05D005992 1.6e-135 486.5 322 68.6
VMungo1309G2813 Vigna mungo HOM05D000434 ORTHO05D005992 1.6e-135 486.5 306 72.2
Phvul.009G172900 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 2.1e-135 486.1 306 71.6
Sed0014341 Sechium edule HOM05D000434 ORTHO05D005992 4.6e-135 485.0 321 67.3
COL.COLO4_20637 Corchorus olitorius HOM05D000434 ORTHO05D005992 6.1e-135 484.6 320 68.1
THA.LOC104824991 Tarenaya hassleriana HOM05D000434 ORTHO05D005992 6.1e-135 484.6 315 69.2
Medtr4g104690 Medicago truncatula HOM05D000434 ORTHO05D005992 1.0e-134 483.8 309 69.6
Potri.012G089400 Populus trichocarpa HOM05D000434 ORTHO05D005992 1.0e-134 483.8 318 69.5
Glyma.06G176500 Glycine max HOM05D000434 ORTHO05D005992 1.4e-134 483.4 306 71.6
LjContig00127g0004723 Lotus japonicus HOM05D000434 ORTHO05D005992 3.0e-134 482.3 306 69.6
MBI06_g22722_MAGBIO Magnolia biondii HOM05D000434 ORTHO05D005992 3.9e-134 481.9 315 68.9
VMungo1309G2109 Vigna mungo HOM05D000434 ORTHO05D005992 3.9e-134 481.9 306 70.6
Ca_16123_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 1.1e-133 480.3 305 70.8
Manes.06G111500 Manihot esculenta HOM05D000434 ORTHO05D005992 1.1e-133 480.3 318 68.2
CDE09G0062 Ceratophyllum demersum HOM05D000434 ORTHO05D005992 1.5e-133 479.9 304 68.1
TPR.G35602 Trifolium pratense HOM05D000434 ORTHO05D005992 2.0e-133 479.6 305 71.1
Glyma.06G176400 Glycine max HOM05D000434 ORTHO05D005992 3.3e-133 478.8 306 69.6
Thecc.03G116300 Theobroma cacao HOM05D000434 ORTHO05D005992 3.3e-133 478.8 320 67.8
Lalb_Chr13g0297571 Lupinus albus HOM05D000434 ORTHO05D005992 4.3e-133 478.4 313 67.7
AUR62001199 Chenopodium quinoa HOM05D000434 ORTHO05D005992 5.7e-133 478.0 315 67.9
VMungo1309G2156 Vigna mungo HOM05D000434 ORTHO05D005992 5.7e-133 478.0 307 71.3
Zm00001eb306980 Zea mays HOM05D000434 ORTHO05D005992 5.7e-133 478.0 318 67.3
AUR62022129 Chenopodium quinoa HOM05D000434 ORTHO05D005992 1.3e-132 476.9 315 67.0
Sabra12G0064400 Salix brachista HOM05D000434 ORTHO05D005992 1.3e-132 476.9 320 67.5
Os07g0688000 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 2.2e-132 476.1 318 65.7
Gorai.008G202000 Gossypium raimondii HOM05D000434 ORTHO05D005992 3.7e-132 475.3 321 66.4
unitig_22.g6297 Utricularia gibba HOM05D000434 ORTHO05D005992 4.8e-132 474.9 288 72.9
ATR0122G026 Amborella trichopoda HOM05D000434 ORTHO05D005992 6.9e-131 471.1 318 65.1
SEGI_02641 Sequoiadendron giganteum HOM05D000434 ORTHO05D005992 9.1e-131 470.7 314 65.6
Gohir.A12G185500 Gossypium hirsutum HOM05D000434 ORTHO05D005992 1.2e-130 470.3 317 66.6
Medtr3g076590 Medicago truncatula HOM05D000434 ORTHO05D005992 1.2e-130 470.3 305 69.5
Ah.08g218690 Amaranthus hybridus HOM05D000434 ORTHO05D007220 3.4e-130 468.8 315 67.0
CARHR232100 Cardamine hirsuta HOM05D000434 ORTHO05D005992 5.0e-129 464.9 303 68.3
Gohir.D12G188284 Gossypium hirsutum HOM05D000434 ORTHO05D005992 8.5e-129 464.2 308 67.5
Psat5g116720 Pisum sativum HOM05D000434 ORTHO05D005992 8.5e-129 464.2 305 68.5
Thhalv10025788m.g Eutrema salsugineum HOM05D000434 ORTHO05D005992 3.2e-128 462.2 303 68.3
HPP92_004599 Vanilla planifolia HOM05D000434 ORTHO05D005992 7.2e-128 461.1 313 66.1
Gorai.003G107100 Gossypium raimondii HOM05D000434 ORTHO05D005992 9.4e-128 460.7 288 72.6
Aa31LG7G11150 Aethionema arabicum HOM05D000434 ORTHO05D005992 1.2e-127 460.3 308 65.6
Aa31LG7G11140 Aethionema arabicum HOM05D000434 ORTHO05D005992 1.6e-127 459.9 303 66.7
Gohir.D03G101700 Gossypium hirsutum HOM05D000434 ORTHO05D005992 6.1e-127 458.0 288 72.2
Sp7g22710 Schrenkiella parvula HOM05D000434 ORTHO05D005992 5.1e-126 454.9 303 66.7
A01p16060 Brassica napus HOM05D000434 ORTHO05D005992 2.6e-125 452.6 311 65.3
Atru.chr9.2595 Acer truncatum HOM05D000434 ORTHO05D005992 4.4e-125 451.8 318 65.7
BraA01t01541Z Brassica rapa HOM05D000434 ORTHO05D001445 4.4e-125 451.8 311 65.3
BolC1t01932H Brassica oleracea HOM05D000434 ORTHO05D001445 7.4e-125 451.1 311 65.3
AL7G28460 Arabidopsis lyrata HOM05D000434 ORTHO05D005992 1.3e-124 450.3 303 66.7
AT4G24730 Arabidopsis thaliana HOM05D000434 ORTHO05D005992 1.7e-124 449.9 303 66.0
C01p20050 Brassica napus HOM05D000434 ORTHO05D001445 1.7e-124 449.9 311 65.0
Carub.0007s1633 Capsella rubella HOM05D000434 ORTHO05D005992 2.2e-124 449.5 303 66.3
Migut.L00359 Erythranthe guttata HOM05D000434 ORTHO05D005992 2.6e-122 442.6 293 68.9
HanXRQChr05g0154811 Helianthus annuus HOM05D000434 ORTHO05D005992 5.9e-122 441.4 316 66.1
Os08g0557200 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 4.7e-119 431.8 312 62.8
BcaC09g50836 Brassica carinata HOM05D000434 ORTHO05D001445 1.5e-117 426.8 311 63.0
HanXRQChr02g0032551 Helianthus annuus HOM05D000434 ORTHO05D005992 1.1e-115 420.6 317 63.1
Pp3c23_9280 Physcomitrium patens HOM05D000434 ORTHO05D005992 1.1e-115 420.6 310 59.0
Zm00001eb176220 Zea mays HOM05D000434 ORTHO05D005992 3.1e-115 419.1 318 61.0
Pp3c15_10910 Physcomitrium patens HOM05D000434 ORTHO05D005992 5.3e-115 418.3 312 60.3
Sed0024178 Sechium edule HOM05D000434 ORTHO05D005992 4.5e-114 415.2 320 57.8
PSO754G0021 Papaver somniferum HOM05D000434 ORTHO05D005992 1.7e-113 413.3 274 66.1
Migut.L00543 Erythranthe guttata HOM05D000434 ORTHO05D005992 5.3e-107 391.7 301 62.1
AUR62028295 Chenopodium quinoa HOM05D000434 ORTHO05D005992 1.7e-105 386.7 313 58.1
CBR_g48132 Chara braunii HOM05D000434 ORTHO05D005992 1.6e-103 380.2 316 53.8
Gohir.D12G188312 Gossypium hirsutum HOM05D000434 ORTHO05D005992 3.4e-101 372.5 321 57.3
Gorai.008G202100 Gossypium raimondii HOM05D000434 ORTHO05D005992 3.4e-101 372.5 321 57.3
Mapoly0153s0032 Marchantia polymorpha HOM05D000434 ORTHO05D005992 9.8e-101 370.9 305 55.4
CSS0026928 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 1.1e-99 367.5 216 75.5
Sabra15G0108100 Salix brachista HOM05D000434 ORTHO05D005992 1.2e-95 354.0 223 70.0
SHI03475 Sapria himalayana HOM05D000434 ORTHO05D005992 1.7e-92 343.6 307 52.1
SMO361G0760 Selaginella moellendorffii HOM05D000434 ORTHO05D005992 4.4e-85 318.9 309 49.5
ECA233G1405 Erigeron canadensis HOM05D000434 ORTHO05D005992 4.6e-82 308.9 267 56.6
SalBow5G4235 Salvia bowleyana HOM05D000434 ORTHO05D005992 2.4e-75 286.6 305 50.5
SalBow5G1355 Salvia bowleyana HOM05D000434 ORTHO05D005992 2.3e-70 270.0 262 55.0
HanXRQChr09g0263851 Helianthus annuus HOM05D000434 ORTHO05D005992 1.2e-66 257.7 181 65.7
HPP92_020252 Vanilla planifolia HOM05D000434 ORTHO05D005992 1.4e-46 191.0 126 65.1
Potri.015G085232 Populus trichocarpa HOM05D000434 ORTHO05D005992 2.6e-45 186.8 134 64.9
Gohir.A12G185600 Gossypium hirsutum HOM05D000434 ORTHO05D005992 5.1e-41 172.6 117 66.7
Mapoly0043s0121 Marchantia polymorpha HOM05D000434 ORTHO05D005992 1.3e-39 167.9 318 32.1
MCO10G403 Micromonas commoda HOM05D000434 ORTHO05D005992 6.0e-34 149.1 301 31.6
AagrBONN_evm.TU.Sc2ySwM_368.1237 Anthoceros agrestis HOM05D000434 ORTHO05D005992 8.2e-31 138.7 245 35.5
MCO14G418 Micromonas commoda HOM05D000434 ORTHO05D005992 2.7e-26 123.6 341 27.0
Pp3c2_17660 Physcomitrium patens HOM05D000434 ORTHO05D005992 8.7e-25 118.6 97 53.6
HPP92_020253 Vanilla planifolia HOM05D000434 ORTHO05D005992 1.4e-14 84.7 54 70.4
Oeu057324.1 Olea europaea HOM05D000434 ORTHO05D005992 1.2e-13 81.6 74 56.8


User provided reference genes

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