Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow5G0967 Salvia bowleyana HOM05D004030 ORTHO05D004952 4.7e-135 484.6 250 100.0
SalBow5G1441 Salvia bowleyana HOM05D004030 ORTHO05D004952 5.2e-33 145.6 74 100.0
SalBow8G0896 Salvia bowleyana HOM05D004030 ORTHO05D004952 6.7e-33 145.2 78 93.6
SalBow5G1832 Salvia bowleyana HOM05D004030 ORTHO05D002854 5.7e-32 142.1 74 95.9
SalBow5G5317 Salvia bowleyana HOM05D004030 ORTHO05D004952 1.3e-31 141.0 74 94.6
SalBow5G5526 Salvia bowleyana HOM05D004030 ORTHO05D004952 2.2e-23 113.6 62 95.2
SGA_v2.0_scaffold1G00064 Striga asiatica HOM05D004030 ORTHO05D004952 6.5e-20 102.1 74 71.6
Migut.M01023 Erythranthe guttata HOM05D004030 ORTHO05D004952 3.0e-17 93.2 77 64.9
Dinv40699 Davidia involucrata HOM05D004030 ORTHO05D004952 9.1e-14 81.6 71 64.8
CSS0010331 Camellia sinensis var. sinensis HOM05D004030 ORTHO05D004952 2.0e-13 80.5 76 59.2
TAR627G0229 Trochodendron aralioides HOM05D004030 ORTHO05D004952 4.5e-13 79.3 75 60.0
SGA_v2.0_scaffold16G07708 Striga asiatica HOM05D004030 ORTHO05D004952 1.3e-12 77.8 64 60.9
Oeu043115.1 Olea europaea HOM05D004030 ORTHO05D004952 1.7e-12 77.4 77 55.8
Actinidia16784 Actinidia chinensis HOM05D004030 ORTHO05D004952 6.5e-12 75.5 76 53.9
CANSAT80G0365 Cannabis sativa HOM05D004030 ORTHO05D004952 8.6e-12 75.1 75 56.0
CSS0043633 Camellia sinensis var. sinensis HOM05D004030 ORTHO05D004952 4.2e-11 72.8 84 53.6
QL05p048142 Quercus lobata HOM05D004030 ORTHO05D004952 5.5e-11 72.4 74 56.8
Dinv16793 Davidia involucrata HOM05D004030 ORTHO05D004952 9.5e-11 71.6 72 54.2
CSS0023566 Camellia sinensis var. sinensis HOM05D004030 ORTHO05D004952 1.2e-10 71.2 73 57.5
GSVIVG01021235001 Vitis vinifera HOM05D004030 ORTHO05D004952 2.1e-10 70.5 72 52.8
Nn3g19533 Nelumbo nucifera HOM05D004030 ORTHO05D004952 3.6e-10 69.7 78 55.1
Cfa013812 Carpinus fangiana HOM05D004030 ORTHO05D004952 6.1e-10 68.9 72 56.9
Haze_22485 Corylus avellana HOM05D004030 ORTHO05D004952 6.1e-10 68.9 72 56.9
CiPaw.09G071100 Carya illinoinensis HOM05D004030 ORTHO05D004952 1.8e-09 67.4 77 51.9
vmacro03922 Vaccinium macrocarpon HOM05D004030 ORTHO05D004952 4.0e-09 66.2 77 51.9
Prupe.4G063800 Prunus persica HOM05D004030 ORTHO05D004952 5.2e-09 65.9 72 59.7
Nitab4.5_0005171g0040 Nicotiana tabacum HOM05D004030 ORTHO05D004952 8.8e-09 65.1 72 54.2
PGSC0003DMG400028477 Solanum tuberosum HOM05D004030 ORTHO05D004952 1.5e-08 64.3 72 51.4
ECA248G1387 Erigeron canadensis HOM05D004030 ORTHO05D004952 2.0e-08 63.9 72 51.4
Nitab4.5_0007465g0050 Nicotiana tabacum HOM05D004030 ORTHO05D004952 2.0e-08 63.9 72 52.8
FvH4_3g07540 Fragaria vesca HOM05D004030 ORTHO05D004952 2.6e-08 63.5 69 55.1
FAN11G3556 Fragaria x ananassa HOM05D004030 ORTHO05D004952 2.6e-08 63.5 69 55.1
Sopen02g021480 Solanum pennellii HOM05D004030 ORTHO05D004952 2.6e-08 63.5 72 51.4
Aqoxy1G02017 Aquilegia oxysepala HOM05D004030 ORTHO05D004952 4.4e-08 62.8 82 50.0
Glyma.04G063400 Glycine max HOM05D004030 ORTHO05D004952 5.7e-08 62.4 74 54.1
Rhsim13G0189000 Rhododendron simsii HOM05D004030 ORTHO05D004952 5.7e-08 62.4 71 53.5
Solyc02g072510.3 Solanum lycopersicum HOM05D004030 ORTHO05D004952 7.5e-08 62.0 72 50.0
Peaxi162Scf00302g00311 Petunia axillaris HOM05D004030 ORTHO05D004952 1.3e-07 61.2 72 47.2
Cfa000628 Carpinus fangiana HOM05D004030 ORTHO05D004952 2.8e-07 60.1 78 46.2
FAN25G0294 Fragaria x ananassa HOM05D004030 ORTHO05D004952 2.8e-07 60.1 69 52.2
CAN.G411.88 Capsicum annuum HOM05D004030 ORTHO05D004952 3.7e-07 59.7 70 51.4
Haze_06204 Corylus avellana HOM05D004030 ORTHO05D004952 3.7e-07 59.7 78 46.2
MD10G1277900 Malus domestica HOM05D004030 ORTHO05D004952 3.7e-07 59.7 72 51.4
FAN16G1462 Fragaria x ananassa HOM05D004030 ORTHO05D004952 4.9e-07 59.3 69 52.2
Hund21166 Selenicereus undatus HOM05D004030 ORTHO05D004952 4.9e-07 59.3 77 44.2
FAN21G1198 Fragaria x ananassa HOM05D004030 ORTHO05D004952 6.3e-07 58.9 69 50.7
Actinidia37045 Actinidia chinensis HOM05D004030 ORTHO05D004952 1.8e-06 57.4 47 57.4
arahy.Tifrunner.gnm1.ann1.6TT57W Arachis hypogaea HOM05D004030 ORTHO05D004952 1.8e-06 57.4 74 50.0
arahy.Tifrunner.gnm1.ann1.HYDG6Q Arachis hypogaea HOM05D004030 ORTHO05D004952 1.8e-06 57.4 74 50.0
Cc02_g15190 Coffea canephora HOM05D004030 ORTHO05D004952 2.4e-06 57.0 73 42.5
RcHm_v2.0_Chr5g0011231 Rosa chinensis HOM05D004030 ORTHO05D004952 3.1e-06 56.6 75 49.3
MELO3C002663.2 Cucumis melo HOM05D004030 ORTHO05D004952 4.1e-06 56.2 66 48.5
CsaV3_1G033240 Cucumis sativus L. HOM05D004030 ORTHO05D004952 4.1e-06 56.2 66 48.5
Potri.004G058700 Populus trichocarpa HOM05D004030 ORTHO05D004952 5.4e-06 55.8 76 48.7
Sed0004310 Sechium edule HOM05D004030 ORTHO05D004952 5.4e-06 55.8 75 46.7
Sc07g0007700 Simmondsia chinensis HOM05D004030 ORTHO05D004952 5.4e-06 55.8 72 48.6
Gohir.A10G036100 Gossypium hirsutum HOM05D004030 ORTHO05D004952 9.2e-06 55.1 73 54.8
Thecc.06G168200 Theobroma cacao HOM05D004030 ORTHO05D004952 9.2e-06 55.1 73 53.4


User provided reference genes

Program Settings